Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27960

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
6,222,482	-		PFLU_RS27955	0.87	+1.8
6,222,635	+				-0.2
6,222,635	+				+2.2
6,222,682	-				-1.1
6,222,696	-				-0.1
6,222,696	-				+1.9
6,222,720	+				+0.8
6,222,720	+				+1.2
6,222,720	+				-1.1
6,222,739	-				+0.9
6,222,759	+				+0.6
6,222,760	-				+2.2
6,222,760	-				-1.4
6,222,789	+				+0.7
6,222,789	+				+0.0
6,222,790	-				-2.3
6,222,790	-				+0.9
6,222,790	-				+0.1
6,222,790	-				+1.1
6,222,790	-				+1.6
6,222,790	-				-0.7
6,222,790	-				+2.6
6,222,790	-				-1.3
6,222,790	-				+3.1
6,222,790	-				+1.6
6,222,791	+				+0.7
6,222,791	+				+2.0
6,222,791	+				-1.0
6,222,791	+				+0.9
6,222,791	+				-2.0
6,222,791	+				-1.1
6,222,791	+				+0.5
6,222,791	+				+2.1
6,222,791	+				+0.3
6,222,791	+				-2.4
6,222,791	+				-0.1
6,222,791	+				+0.5
6,222,791	+				-0.4
6,222,791	+				-1.3
6,222,792	-				-1.1
6,222,792	-				+1.4
6,222,792	-				+2.5
6,222,792	-				-1.9
6,222,792	-				+1.3
6,222,792	-				+1.5
6,222,792	-				-0.3
6,222,792	-				-0.7
6,222,792	-				-0.7
6,222,792	-				-0.3
6,222,792	-				+0.1
6,222,792	-				+2.1
6,222,792	-				-0.3
6,222,792	-				+2.0
6,222,793	+				-0.4
6,222,793	+				+2.7
6,222,793	+				+0.5
6,222,793	+				-1.3
6,222,793	+				-0.3
6,222,793	+				-0.1
6,222,793	+				+0.6
6,222,793	+				+1.1
6,222,793	+				-2.3
6,222,793	+				-0.5
6,222,793	+				-0.9
6,222,793	+				+1.5
6,222,794	-				-0.1
6,222,794	-				+3.2
6,222,794	-				+1.3
6,222,794	-				+2.3
6,222,794	-				+2.6
6,222,794	-				-0.5
6,222,794	-				-1.8
6,222,794	-				-0.7
6,222,794	-				-0.9
6,222,794	-				+1.7
6,222,794	-				+0.8
6,222,794	-				+2.3
6,222,794	-				+3.5
6,222,794	-				+0.9
6,222,794	-				+1.0
6,222,794	-				+0.5
6,222,794	-				+1.3
6,222,794	-				+2.2
6,222,794	-				-1.9
6,222,817	+				-1.7
6,222,817	+				-0.1
6,222,817	+				+3.0
6,222,818	-				+3.2
6,222,948	+				-1.3
6,222,948	+				+0.1
6,222,965	+				+2.7
6,222,965	+				-1.8
6,222,965	+				+0.8
6,222,965	+				+3.2
6,222,966	-				-0.7
6,222,966	-				+0.1
6,222,966	-				+1.3
6,222,966	-				+1.4
6,222,966	-				+1.3
6,222,969	+				-1.1
6,222,969	+				+1.6
6,222,969	+				+2.4
6,222,969	+				-0.1
6,222,969	+				-1.5
6,222,969	+				+1.5
6,222,969	+				-2.0
6,222,969	+				+0.6
6,222,969	+				-0.9
6,222,969	+				-0.7
6,222,970	-				-0.3
6,222,970	-				-1.2
6,222,970	-				+0.5
6,222,970	-				+0.5
6,222,970	-				+1.7
6,222,973	+				-1.7
6,222,973	+				-1.6
6,222,973	+				+2.9
6,222,973	+				-3.6
6,222,974	-				+0.8
6,222,974	-				+1.5
6,223,023	-				-2.2
6,223,023	-				-0.5
6,223,023	-				-0.8
6,223,023	-				+1.7
6,223,023	-				+1.5
6,223,023	-				-0.7
6,223,085	-				+1.5
6,223,085	-				-2.5
6,223,094	+				-2.7
6,223,094	+				-2.0
6,223,094	+				-0.5
6,223,094	+				-1.7
6,223,094	+				+2.2
6,223,094	+				-1.4
6,223,095	-				-2.1
6,223,095	-				+1.2
6,223,095	-				-0.9
6,223,095	-				+1.0
6,223,108	-				-0.5
6,223,151	+				-1.0
6,223,151	+				+1.1
6,223,170	+				-1.2
6,223,170	+				+0.1
6,223,170	+				+0.3
6,223,170	+				+1.1
6,223,170	+				-1.2
6,223,170	+				-0.5
6,223,170	+				+2.0
6,223,171	-				-0.9
6,223,210	+				+1.1
6,223,210	+				+0.5
6,223,210	+				-1.9
6,223,210	+				-1.1
6,223,210	+				+0.7
6,223,211	-				+0.4
6,223,271	+				+1.6
6,223,271	+				-0.0
6,223,271	+				+0.5
6,223,272	-				+1.3
6,223,582	+		PFLU_RS27960	0.31	+1.0
6,223,630	+		PFLU_RS27960	0.34	+0.9
6,223,630	+		PFLU_RS27960	0.34	+1.1
6,223,630	+		PFLU_RS27960	0.34	-2.4
6,223,630	+		PFLU_RS27960	0.34	+2.1
6,223,630	+		PFLU_RS27960	0.34	+0.3
6,223,630	+		PFLU_RS27960	0.34	+1.7
6,223,630	+		PFLU_RS27960	0.34	+1.1
6,223,631	-		PFLU_RS27960	0.34	+1.4
6,223,631	-		PFLU_RS27960	0.34	-0.1
6,223,631	-		PFLU_RS27960	0.34	-1.9
6,223,631	-		PFLU_RS27960	0.34	-1.0
6,223,631	-		PFLU_RS27960	0.34	-0.3
6,223,631	-		PFLU_RS27960	0.34	+0.7
6,223,631	-		PFLU_RS27960	0.34	+3.5
6,223,631	-		PFLU_RS27960	0.34	+2.8
6,223,649	+		PFLU_RS27960	0.35	-1.3
6,223,649	+		PFLU_RS27960	0.35	+0.7
6,223,988	+		PFLU_RS27960	0.60	-0.9
6,223,988	+		PFLU_RS27960	0.60	+0.3
6,223,988	+		PFLU_RS27960	0.60	-0.2
6,223,988	+		PFLU_RS27960	0.60	+1.4
6,223,989	-		PFLU_RS27960	0.60	+1.2
6,223,989	-		PFLU_RS27960	0.60	-2.0
6,223,989	-		PFLU_RS27960	0.60	-1.9
6,223,998	+		PFLU_RS27960	0.61	-0.1
6,223,998	+		PFLU_RS27960	0.61	+0.1
6,223,999	-		PFLU_RS27960	0.61	-0.7
6,223,999	-		PFLU_RS27960	0.61	+0.8
6,224,026	+		PFLU_RS27960	0.63	+1.1
6,224,027	-		PFLU_RS27960	0.63	+0.9
6,224,107	+		PFLU_RS27960	0.69	-1.7
6,224,108	-		PFLU_RS27960	0.69	+3.5
6,224,108	-		PFLU_RS27960	0.69	+0.1
6,224,108	-		PFLU_RS27960	0.69	+0.4
6,224,108	-		PFLU_RS27960	0.69	-1.4
6,224,110	+		PFLU_RS27960	0.69	+2.2
6,224,110	+		PFLU_RS27960	0.69	+0.1
6,224,110	+		PFLU_RS27960	0.69	+0.4
6,224,110	+		PFLU_RS27960	0.69	+1.3
6,224,110	+		PFLU_RS27960	0.69	+1.7
6,224,110	+		PFLU_RS27960	0.69	+1.0
6,224,110	+		PFLU_RS27960	0.69	+0.4
6,224,110	+		PFLU_RS27960	0.69	+1.5
6,224,111	-		PFLU_RS27960	0.69	-1.4
6,224,111	-		PFLU_RS27960	0.69	+1.0
6,224,111	-		PFLU_RS27960	0.69	+0.1
6,224,111	-		PFLU_RS27960	0.69	-1.9
6,224,111	-		PFLU_RS27960	0.69	-0.5
6,224,111	-		PFLU_RS27960	0.69	-2.3
6,224,111	-		PFLU_RS27960	0.69	+1.5
6,224,111	-		PFLU_RS27960	0.69	-0.2
6,224,111	-		PFLU_RS27960	0.69	+2.5
6,224,111	-		PFLU_RS27960	0.69	+0.2
6,224,143	+		PFLU_RS27960	0.71	-1.1
6,224,144	-		PFLU_RS27960	0.71	+1.1
6,224,386	+		PFLU_RS27960	0.89	-0.3
6,224,387	-		PFLU_RS27960	0.89	-0.5
6,224,531	+				-1.4
6,224,532	-				-0.9
6,224,561	-				-0.1
6,224,586	-		PFLU_RS31835	0.20	-3.3
6,224,625	-		PFLU_RS31835	0.38	-1.0
6,224,654	+		PFLU_RS31835	0.52	-0.4
6,224,654	+		PFLU_RS31835	0.52	-2.0
6,224,655	-		PFLU_RS31835	0.52	-2.5
6,224,655	-		PFLU_RS31835	0.52	+0.1
6,224,755	+				+1.8
6,224,755	+				+1.3
6,224,756	-				-0.7
6,224,813	+				-2.1
6,224,814	-				-1.2
6,224,834	+				+0.6
6,224,834	+				+0.3
6,224,834	+				+1.3
6,224,834	+				-0.7
6,224,834	+				-0.2
6,224,834	+				-1.8
6,224,835	-				+0.5
6,224,835	-				+1.6
6,224,835	-				-1.6
6,224,835	-				-2.1
6,224,835	-				-1.8
6,224,835	-				+0.8
6,224,835	-				+0.8
6,224,835	-				+2.6
6,224,835	-				+1.1
6,224,835	-				-1.9
6,224,835	-				-0.7
6,224,835	-				+0.5
6,224,906	+				+0.7
6,224,906	+				-0.1
6,224,906	+				+1.8
6,224,906	+				-1.2
6,224,906	+				-1.1
6,224,906	+				+1.0
6,224,906	+				-0.5
6,224,906	+				-1.6
6,224,907	-				-1.8
6,224,907	-				-1.7
6,224,907	-				+0.1
6,224,907	-				-1.6
6,224,908	+				+0.3
6,224,908	+				+0.8
6,224,908	+				+1.4
6,224,908	+				+1.1
6,224,908	+				-2.6
6,224,908	+				+2.3
6,224,909	-				+1.1
6,224,909	-				+0.6
6,224,909	-				+0.8
6,224,909	-				+2.4
6,224,909	-				-3.3
6,224,947	+				+2.5
6,224,948	-				-1.2
6,225,119	+		PFLU_RS27965	0.17	-2.1
6,225,120	-		PFLU_RS27965	0.18	-1.4
6,225,158	+		PFLU_RS27965	0.22	+0.1
6,225,158	+		PFLU_RS27965	0.22	+1.1
6,225,158	+		PFLU_RS27965	0.22	+1.2
6,225,158	+		PFLU_RS27965	0.22	-0.7
6,225,158	+		PFLU_RS27965	0.22	-1.1
6,225,158	+		PFLU_RS27965	0.22	+0.3
6,225,158	+		PFLU_RS27965	0.22	-1.0
6,225,158	+		PFLU_RS27965	0.22	-1.0
6,225,158	+		PFLU_RS27965	0.22	+1.6
6,225,158	+		PFLU_RS27965	0.22	-1.1
6,225,158	+		PFLU_RS27965	0.22	+0.5
6,225,159	-		PFLU_RS27965	0.22	-1.9
6,225,159	-		PFLU_RS27965	0.22	+1.1
6,225,159	-		PFLU_RS27965	0.22	+0.5
6,225,159	-		PFLU_RS27965	0.22	+1.3
6,225,159	-		PFLU_RS27965	0.22	+4.3
6,225,159	-		PFLU_RS27965	0.22	+2.5
6,225,159	-		PFLU_RS27965	0.22	-2.0
6,225,159	-		PFLU_RS27965	0.22	-1.9
6,225,231	+		PFLU_RS27965	0.29	+2.5
6,225,231	+		PFLU_RS27965	0.29	+0.2
6,225,231	+		PFLU_RS27965	0.29	-1.7
6,225,231	+		PFLU_RS27965	0.29	+0.6
6,225,231	+		PFLU_RS27965	0.29	+1.0
6,225,231	+		PFLU_RS27965	0.29	+0.6
6,225,231	+		PFLU_RS27965	0.29	-0.2
6,225,231	+		PFLU_RS27965	0.29	+1.8
6,225,231	+		PFLU_RS27965	0.29	+2.8
6,225,231	+		PFLU_RS27965	0.29	-1.5
6,225,231	+		PFLU_RS27965	0.29	+1.2
6,225,232	-		PFLU_RS27965	0.29	+1.5
6,225,232	-		PFLU_RS27965	0.29	+0.6
6,225,232	-		PFLU_RS27965	0.29	-0.7
6,225,232	-		PFLU_RS27965	0.29	+1.5
6,225,232	-		PFLU_RS27965	0.29	-0.3
6,225,239	+		PFLU_RS27965	0.30	-0.4
6,225,240	-		PFLU_RS27965	0.30	-1.5
6,225,293	+		PFLU_RS27965	0.36	+0.1
6,225,293	+		PFLU_RS27965	0.36	+1.5
6,225,293	+		PFLU_RS27965	0.36	+2.6
6,225,293	+		PFLU_RS27965	0.36	-2.5
6,225,294	-		PFLU_RS27965	0.36	-1.1
6,225,294	-		PFLU_RS27965	0.36	+2.5
6,225,294	-		PFLU_RS27965	0.36	+0.2
6,225,294	-		PFLU_RS27965	0.36	-0.2
6,225,294	-		PFLU_RS27965	0.36	-3.2
6,225,294	-		PFLU_RS27965	0.36	-1.3
6,225,320	+		PFLU_RS27965	0.39	-2.4
6,225,320	+		PFLU_RS27965	0.39	+1.7
6,225,320	+		PFLU_RS27965	0.39	-0.7
6,225,321	-		PFLU_RS27965	0.39	-1.1
6,225,387	-		PFLU_RS27965	0.46	+1.0