Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24160

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
5,404,942	+				+0.1
5,404,942	+				+0.5
5,404,943	-				-0.2
5,404,943	-				-1.8
5,404,943	-				-1.7
5,404,943	-				+2.9
5,405,045	+		PFLU_RS24155	0.13	-0.2
5,405,045	+		PFLU_RS24155	0.13	+2.7
5,405,045	+		PFLU_RS24155	0.13	-1.5
5,405,045	+		PFLU_RS24155	0.13	+2.1
5,405,045	+		PFLU_RS24155	0.13	-0.5
5,405,045	+		PFLU_RS24155	0.13	+0.6
5,405,045	+		PFLU_RS24155	0.13	-2.5
5,405,046	-		PFLU_RS24155	0.13	+3.3
5,405,046	-		PFLU_RS24155	0.13	+0.3
5,405,046	-		PFLU_RS24155	0.13	+1.9
5,405,046	-		PFLU_RS24155	0.13	+0.0
5,405,046	-		PFLU_RS24155	0.13	+1.1
5,405,073	+		PFLU_RS24155	0.16	+0.5
5,405,073	+		PFLU_RS24155	0.16	+1.1
5,405,074	-		PFLU_RS24155	0.16	+1.4
5,405,074	-		PFLU_RS24155	0.16	-1.3
5,405,085	+		PFLU_RS24155	0.17	+2.6
5,405,085	+		PFLU_RS24155	0.17	-0.2
5,405,085	+		PFLU_RS24155	0.17	-0.9
5,405,085	+		PFLU_RS24155	0.17	-1.5
5,405,085	+		PFLU_RS24155	0.17	-1.5
5,405,086	-		PFLU_RS24155	0.18	-0.7
5,405,086	-		PFLU_RS24155	0.18	+1.6
5,405,086	-		PFLU_RS24155	0.18	+2.1
5,405,086	-		PFLU_RS24155	0.18	-2.0
5,405,086	-		PFLU_RS24155	0.18	+1.0
5,405,086	-		PFLU_RS24155	0.18	+1.1
5,405,086	-		PFLU_RS24155	0.18	+0.5
5,405,086	-		PFLU_RS24155	0.18	+0.1
5,405,086	-		PFLU_RS24155	0.18	-2.0
5,405,086	-		PFLU_RS24155	0.18	+0.5
5,405,086	-		PFLU_RS24155	0.18	-1.7
5,405,086	-		PFLU_RS24155	0.18	-0.2
5,405,086	-		PFLU_RS24155	0.18	-1.3
5,405,086	-		PFLU_RS24155	0.18	-2.7
5,405,165	+		PFLU_RS24155	0.26	-1.8
5,405,165	+		PFLU_RS24155	0.26	+1.5
5,405,166	-		PFLU_RS24155	0.26	-1.5
5,405,166	-		PFLU_RS24155	0.26	+0.5
5,405,244	+		PFLU_RS24155	0.35	-2.1
5,405,245	-		PFLU_RS24155	0.35	+1.1
5,405,245	-		PFLU_RS24155	0.35	-0.9
5,405,360	+		PFLU_RS24155	0.47	-0.2
5,405,360	+		PFLU_RS24155	0.47	-1.7
5,405,360	+		PFLU_RS24155	0.47	-0.9
5,405,360	+		PFLU_RS24155	0.47	+1.6
5,405,360	+		PFLU_RS24155	0.47	-2.7
5,405,360	+		PFLU_RS24155	0.47	+4.3
5,405,360	+		PFLU_RS24155	0.47	+1.9
5,405,360	+		PFLU_RS24155	0.47	-1.6
5,405,361	-		PFLU_RS24155	0.47	+0.1
5,405,361	-		PFLU_RS24155	0.47	-1.2
5,405,361	-		PFLU_RS24155	0.47	-1.1
5,405,390	-		PFLU_RS24155	0.51	-2.3
5,405,516	+		PFLU_RS24155	0.64	-0.5
5,405,516	+		PFLU_RS24155	0.64	-2.4
5,405,516	+		PFLU_RS24155	0.64	-1.5
5,405,516	+		PFLU_RS24155	0.64	+0.5
5,405,516	+		PFLU_RS24155	0.64	-1.2
5,405,516	+		PFLU_RS24155	0.64	+4.1
5,405,516	+		PFLU_RS24155	0.64	-1.2
5,405,517	-		PFLU_RS24155	0.64	-0.5
5,405,517	-		PFLU_RS24155	0.64	+0.9
5,405,517	-		PFLU_RS24155	0.64	-0.1
5,405,517	-		PFLU_RS24155	0.64	+0.2
5,405,517	-		PFLU_RS24155	0.64	-2.1
5,405,517	-		PFLU_RS24155	0.64	-2.2
5,405,517	-		PFLU_RS24155	0.64	-0.7
5,405,517	-		PFLU_RS24155	0.64	+2.1
5,405,517	-		PFLU_RS24155	0.64	-0.7
5,405,517	-		PFLU_RS24155	0.64	+1.0
5,405,517	-		PFLU_RS24155	0.64	-1.7
5,405,517	-		PFLU_RS24155	0.64	+0.4
5,405,672	+		PFLU_RS24155	0.81	+1.8
5,405,672	+		PFLU_RS24155	0.81	-0.5
5,405,672	+		PFLU_RS24155	0.81	-0.5
5,405,672	+		PFLU_RS24155	0.81	-0.7
5,405,672	+		PFLU_RS24155	0.81	+0.0
5,405,673	-		PFLU_RS24155	0.81	-1.2
5,405,673	-		PFLU_RS24155	0.81	-1.7
5,405,673	-		PFLU_RS24155	0.81	-1.3
5,405,673	-		PFLU_RS24155	0.81	+0.7
5,405,673	-		PFLU_RS24155	0.81	-2.5
5,405,673	-		PFLU_RS24155	0.81	-0.6
5,405,673	-		PFLU_RS24155	0.81	+1.7
5,405,673	-		PFLU_RS24155	0.81	-1.2
5,405,673	-		PFLU_RS24155	0.81	-1.5
5,405,673	-		PFLU_RS24155	0.81	+1.8
5,405,673	-		PFLU_RS24155	0.81	-2.0
5,405,673	-		PFLU_RS24155	0.81	-1.5
5,405,684	+		PFLU_RS24155	0.83	-1.8
5,405,684	+		PFLU_RS24155	0.83	-1.6
5,405,684	+		PFLU_RS24155	0.83	+1.1
5,405,684	+		PFLU_RS24155	0.83	-0.3
5,405,684	+		PFLU_RS24155	0.83	-0.7
5,405,684	+		PFLU_RS24155	0.83	+0.4
5,405,684	+		PFLU_RS24155	0.83	-0.3
5,405,684	+		PFLU_RS24155	0.83	-0.4
5,405,684	+		PFLU_RS24155	0.83	-1.2
5,405,684	+		PFLU_RS24155	0.83	+1.1
5,405,685	-		PFLU_RS24155	0.83	+3.0
5,405,685	-		PFLU_RS24155	0.83	+1.0
5,405,685	-		PFLU_RS24155	0.83	+0.4
5,405,685	-		PFLU_RS24155	0.83	-1.7
5,405,685	-		PFLU_RS24155	0.83	+2.8
5,405,685	-		PFLU_RS24155	0.83	-0.5
5,405,685	-		PFLU_RS24155	0.83	+0.5
5,405,723	+		PFLU_RS24155	0.87	+1.9
5,405,723	+		PFLU_RS24155	0.87	-1.9
5,405,723	+		PFLU_RS24155	0.87	-0.9
5,405,723	+		PFLU_RS24155	0.87	+1.7
5,405,723	+		PFLU_RS24155	0.87	+0.9
5,405,723	+		PFLU_RS24155	0.87	-0.9
5,405,723	+		PFLU_RS24155	0.87	-2.8
5,405,724	-		PFLU_RS24155	0.87	-0.1
5,405,724	-		PFLU_RS24155	0.87	+1.4
5,405,724	-		PFLU_RS24155	0.87	-0.9
5,405,727	+		PFLU_RS24155	0.87	+3.0
5,405,727	+		PFLU_RS24155	0.87	+0.2
5,405,727	+		PFLU_RS24155	0.87	+2.1
5,405,728	-		PFLU_RS24155	0.87	+1.1
5,405,728	-		PFLU_RS24155	0.87	+2.4
5,405,728	-		PFLU_RS24155	0.87	+1.1
5,405,728	-		PFLU_RS24155	0.87	-0.7
5,405,728	-		PFLU_RS24155	0.87	+2.4
5,405,728	-		PFLU_RS24155	0.87	-0.5
5,405,728	-		PFLU_RS24155	0.87	+2.1
5,405,728	-		PFLU_RS24155	0.87	+0.4
5,405,728	-		PFLU_RS24155	0.87	-1.9
5,405,728	-		PFLU_RS24155	0.87	-0.5
5,405,728	-		PFLU_RS24155	0.87	+0.1
5,405,728	-		PFLU_RS24155	0.87	-1.2
5,405,728	-		PFLU_RS24155	0.87	+1.0
5,405,728	-		PFLU_RS24155	0.87	-0.5
5,405,728	-		PFLU_RS24155	0.87	-0.2
5,405,728	-		PFLU_RS24155	0.87	+0.1
5,405,735	+		PFLU_RS24155	0.88	+0.5
5,405,735	+		PFLU_RS24155	0.88	+1.7
5,405,735	+		PFLU_RS24155	0.88	-0.7
5,405,736	-		PFLU_RS24155	0.88	+2.3
5,405,736	-		PFLU_RS24155	0.88	-1.7
5,405,736	-		PFLU_RS24155	0.88	-1.0
5,405,736	-		PFLU_RS24155	0.88	+1.9
5,405,736	-		PFLU_RS24155	0.88	+3.2
5,405,736	-		PFLU_RS24155	0.88	-1.0
5,405,736	-		PFLU_RS24155	0.88	+1.4
5,405,736	-		PFLU_RS24155	0.88	+0.2
5,405,781	+				+0.5
5,405,781	+				+0.9
5,405,782	-				+1.3
5,405,782	-				+0.7
5,405,796	+				+2.0
5,405,796	+				-1.7
5,405,796	+				-1.0
5,405,796	+				+0.3
5,405,796	+				-0.5
5,405,796	+				-0.0
5,405,796	+				-0.3
5,405,796	+				+1.7
5,405,796	+				-0.5
5,405,797	-				-1.5
5,405,797	-				-1.6
5,405,797	-				+0.4
5,405,797	-				-1.0
5,405,797	-				-1.7
5,405,797	-				+0.5
5,405,797	-				+1.7
5,405,797	-				+3.0
5,405,869	+				-1.7
5,405,869	+				-2.5
5,405,869	+				+2.2
5,405,870	-				+0.1
5,405,870	-				+0.5
5,405,870	-				+2.7
5,405,870	-				-2.0
5,405,870	-				+0.0
5,405,870	-				+3.5
5,405,917	+				+3.1
5,405,968	+				+2.7
5,405,968	+				+2.5
5,405,968	+				+4.1
5,405,968	+				+5.4
5,405,968	+				+0.5
5,405,968	+				+3.8
5,405,968	+				+4.0
5,405,968	+				+2.1
5,405,968	+				+1.9
5,405,968	+				+4.8
5,405,968	+				+4.0
5,405,968	+				+1.0
5,405,969	-				+3.7
5,405,969	-				+0.1
5,405,969	-				+2.3
5,405,969	-				+4.7
5,405,969	-				+4.1
5,405,969	-				+0.9
5,405,969	-				+4.7
5,405,969	-				+2.1
5,405,969	-				+4.6
5,405,969	-				+2.1
5,405,969	-				+2.1
5,405,969	-				+3.1
5,405,969	-				-0.5
5,406,141	+		PFLU_RS24160	0.12	+4.1
5,406,141	+		PFLU_RS24160	0.12	+3.0
5,406,141	+		PFLU_RS24160	0.12	+0.7
5,406,142	-		PFLU_RS24160	0.12	+3.9
5,406,142	-		PFLU_RS24160	0.12	+3.7
5,406,142	-		PFLU_RS24160	0.12	+4.4
5,406,142	-		PFLU_RS24160	0.12	+3.6
5,406,142	-		PFLU_RS24160	0.12	+4.8
5,406,142	-		PFLU_RS24160	0.12	+3.5
5,406,169	-		PFLU_RS24160	0.14	+5.8
5,406,169	-		PFLU_RS24160	0.14	+1.1
5,406,234	+		PFLU_RS24160	0.17	+4.6
5,406,235	-		PFLU_RS24160	0.17	+3.1
5,406,235	-		PFLU_RS24160	0.17	-1.2
5,406,242	+		PFLU_RS24160	0.17	+3.2
5,406,360	+		PFLU_RS24160	0.23	+2.1
5,406,360	+		PFLU_RS24160	0.23	+1.4
5,406,360	+		PFLU_RS24160	0.23	+3.1
5,406,360	+		PFLU_RS24160	0.23	+4.4
5,406,507	+		PFLU_RS24160	0.30	+2.1
5,406,507	+		PFLU_RS24160	0.30	+3.0
5,406,507	+		PFLU_RS24160	0.30	+0.5
5,406,507	+		PFLU_RS24160	0.30	+3.4
5,406,508	-		PFLU_RS24160	0.30	+4.4
5,406,508	-		PFLU_RS24160	0.30	-0.5
5,406,508	-		PFLU_RS24160	0.30	+6.4
5,406,508	-		PFLU_RS24160	0.30	+2.7
5,406,508	-		PFLU_RS24160	0.30	+0.5
5,406,508	-		PFLU_RS24160	0.30	+4.1
5,406,508	-		PFLU_RS24160	0.30	-0.7
5,406,750	+		PFLU_RS24160	0.42	+2.1
5,406,751	-		PFLU_RS24160	0.42	+5.4
5,406,810	+		PFLU_RS24160	0.45	+2.1
5,406,810	+		PFLU_RS24160	0.45	-0.2
5,406,810	+		PFLU_RS24160	0.45	+4.6
5,406,810	+		PFLU_RS24160	0.45	+0.5
5,406,810	+		PFLU_RS24160	0.45	+2.1
5,406,810	+		PFLU_RS24160	0.45	+3.7
5,406,811	-		PFLU_RS24160	0.45	+4.3
5,406,811	-		PFLU_RS24160	0.45	+2.1
5,406,811	-		PFLU_RS24160	0.45	+3.4
5,406,885	+		PFLU_RS24160	0.49	+3.1
5,406,885	+		PFLU_RS24160	0.49	+4.2
5,406,885	+		PFLU_RS24160	0.49	+1.5
5,406,886	-		PFLU_RS24160	0.49	+3.7
5,406,912	+		PFLU_RS24160	0.50	+3.1
5,406,912	+		PFLU_RS24160	0.50	+3.4
5,406,912	+		PFLU_RS24160	0.50	+6.2
5,406,913	-		PFLU_RS24160	0.50	+0.1
5,407,002	+		PFLU_RS24160	0.55	+3.8
5,407,003	-		PFLU_RS24160	0.55	-0.2
5,407,003	-		PFLU_RS24160	0.55	+4.5
5,407,003	-		PFLU_RS24160	0.55	+6.2
5,407,003	-		PFLU_RS24160	0.55	+4.9
5,407,017	+		PFLU_RS24160	0.55	+4.5
5,407,017	+		PFLU_RS24160	0.55	+3.7
5,407,017	+		PFLU_RS24160	0.55	+3.4
5,407,017	+		PFLU_RS24160	0.55	+0.5
5,407,018	-		PFLU_RS24160	0.55	+4.0
5,407,018	-		PFLU_RS24160	0.55	+4.4
5,407,018	-		PFLU_RS24160	0.55	-0.0
5,407,322	+		PFLU_RS24160	0.70	+3.3
5,407,364	+		PFLU_RS24160	0.72	+5.4
5,407,364	+		PFLU_RS24160	0.72	+1.1
5,407,364	+		PFLU_RS24160	0.72	+0.5
5,407,364	+		PFLU_RS24160	0.72	+3.3
5,407,364	+		PFLU_RS24160	0.72	+4.3
5,407,365	-		PFLU_RS24160	0.72	+1.1
5,407,365	-		PFLU_RS24160	0.72	+2.1
5,407,365	-		PFLU_RS24160	0.72	+3.3
5,407,365	-		PFLU_RS24160	0.72	-0.5
5,407,414	+		PFLU_RS24160	0.75	+3.2
5,407,578	-		PFLU_RS24160	0.83	+4.6
5,407,722	-				+0.1
5,407,722	-				-0.2
5,407,789	-				+2.5
5,407,859	+				+5.2
5,407,859	+				+4.1
5,407,859	+				+0.3
5,407,859	+				+3.4
5,407,859	+				+4.6
5,407,860	-				+6.7
5,407,952	+				-0.2
5,407,953	-				+2.0
5,408,081	+		PFLU_RS24165	0.26	-1.7
5,408,082	-		PFLU_RS24165	0.27	-1.5
5,408,133	+		PFLU_RS24165	0.35	+0.7
5,408,133	+		PFLU_RS24165	0.35	+2.8
5,408,134	-		PFLU_RS24165	0.36	-0.7
5,408,134	-		PFLU_RS24165	0.36	-1.6
5,408,134	-		PFLU_RS24165	0.36	+1.5
5,408,134	-		PFLU_RS24165	0.36	-1.7
5,408,192	+		PFLU_RS24165	0.46	-1.7
5,408,193	-		PFLU_RS24165	0.46	-3.0
5,408,193	-		PFLU_RS24165	0.46	-1.6
5,408,193	-		PFLU_RS24165	0.46	+3.2
5,408,193	-		PFLU_RS24165	0.46	+2.2
5,408,193	-		PFLU_RS24165	0.46	+2.4
5,408,402	+		PFLU_RS24165	0.82	+0.9
5,408,402	+		PFLU_RS24165	0.82	+2.5
5,408,402	+		PFLU_RS24165	0.82	+0.9
5,408,402	+		PFLU_RS24165	0.82	+0.1
5,408,402	+		PFLU_RS24165	0.82	-0.7
5,408,402	+		PFLU_RS24165	0.82	-0.8
5,408,402	+		PFLU_RS24165	0.82	-0.7
5,408,402	+		PFLU_RS24165	0.82	+0.9
5,408,402	+		PFLU_RS24165	0.82	-1.2
5,408,402	+		PFLU_RS24165	0.82	-1.3
5,408,402	+		PFLU_RS24165	0.82	-1.5
5,408,402	+		PFLU_RS24165	0.82	-0.9
5,408,402	+		PFLU_RS24165	0.82	-1.5
5,408,402	+		PFLU_RS24165	0.82	-1.8
5,408,403	-		PFLU_RS24165	0.82	-0.2
5,408,403	-		PFLU_RS24165	0.82	-0.7
5,408,403	-		PFLU_RS24165	0.82	-0.7
5,408,403	-		PFLU_RS24165	0.82	+3.0
5,408,403	-		PFLU_RS24165	0.82	-0.9
5,408,403	-		PFLU_RS24165	0.82	-2.5
5,408,403	-		PFLU_RS24165	0.82	-0.5
5,408,403	-		PFLU_RS24165	0.82	-1.0
5,408,403	-		PFLU_RS24165	0.82	-0.1
5,408,403	-		PFLU_RS24165	0.82	+0.3
5,408,403	-		PFLU_RS24165	0.82	-2.2
5,408,403	-		PFLU_RS24165	0.82	-3.6
5,408,403	-		PFLU_RS24165	0.82	-0.2
5,408,404	+		PFLU_RS24165	0.82	-1.3
5,408,404	+		PFLU_RS24165	0.82	+1.3
5,408,404	+		PFLU_RS24165	0.82	-0.2
5,408,404	+		PFLU_RS24165	0.82	-0.2
5,408,404	+		PFLU_RS24165	0.82	+2.8
5,408,405	-		PFLU_RS24165	0.82	+1.1
5,408,405	-		PFLU_RS24165	0.82	-0.4
5,408,405	-		PFLU_RS24165	0.82	+2.0
5,408,425	-		PFLU_RS24165	0.86	-0.3
5,408,425	-		PFLU_RS24165	0.86	-1.2
5,408,425	-		PFLU_RS24165	0.86	+0.7
5,408,466	+				-2.2
5,408,467	-				-3.1
5,408,467	-				-0.9
5,408,504	+				+2.2
5,408,505	-				-2.5
5,408,505	-				+1.6
5,408,513	-				+1.8
5,408,657	+				+2.4
5,408,657	+				+1.1
5,408,657	+				-1.9
5,408,657	+				-0.8
5,408,657	+				+0.7
5,408,657	+				+1.0
5,408,657	+				+2.1
5,408,657	+				-0.0
5,408,657	+				-1.5
5,408,657	+				+0.7
5,408,657	+				-0.7
5,408,657	+				+0.5
5,408,670	+				+0.2
5,408,670	+				-1.2
5,408,671	-				-3.3
5,408,751	-				+1.0