Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23830

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
5,341,280	+		PFLU_RS23825	0.81	-2.0
5,341,307	+		PFLU_RS23825	0.81	-0.7
5,341,307	+		PFLU_RS23825	0.81	+1.5
5,341,308	-		PFLU_RS23825	0.81	+1.5
5,341,308	-		PFLU_RS23825	0.81	+2.4
5,341,308	-		PFLU_RS23825	0.81	-1.0
5,341,308	-		PFLU_RS23825	0.81	-0.1
5,341,308	-		PFLU_RS23825	0.81	+2.1
5,341,318	+		PFLU_RS23825	0.82	+2.5
5,341,318	+		PFLU_RS23825	0.82	+1.1
5,341,318	+		PFLU_RS23825	0.82	-0.7
5,341,318	+		PFLU_RS23825	0.82	-2.6
5,341,318	+		PFLU_RS23825	0.82	+2.1
5,341,318	+		PFLU_RS23825	0.82	-1.7
5,341,318	+		PFLU_RS23825	0.82	-1.5
5,341,319	-		PFLU_RS23825	0.82	-0.0
5,341,319	-		PFLU_RS23825	0.82	+0.4
5,341,319	-		PFLU_RS23825	0.82	+3.6
5,341,363	+		PFLU_RS23825	0.83	+0.1
5,341,363	+		PFLU_RS23825	0.83	-0.3
5,341,363	+		PFLU_RS23825	0.83	+1.1
5,341,363	+		PFLU_RS23825	0.83	-2.0
5,341,363	+		PFLU_RS23825	0.83	-2.5
5,341,364	-		PFLU_RS23825	0.83	+1.2
5,341,364	-		PFLU_RS23825	0.83	+1.4
5,341,364	-		PFLU_RS23825	0.83	-1.8
5,341,378	+		PFLU_RS23825	0.83	-0.5
5,341,414	+		PFLU_RS23825	0.84	+0.5
5,341,514	+		PFLU_RS23825	0.86	+2.8
5,341,514	+		PFLU_RS23825	0.86	+1.6
5,341,515	-		PFLU_RS23825	0.86	+0.8
5,341,515	-		PFLU_RS23825	0.86	-3.3
5,341,515	-		PFLU_RS23825	0.86	+2.1
5,341,515	-		PFLU_RS23825	0.86	+1.2
5,341,659	-		PFLU_RS23825	0.90	-3.0
5,341,859	-				+1.2
5,341,878	+				-1.4
5,341,878	+				+1.9
5,341,878	+				+0.7
5,341,878	+				+1.8
5,341,878	+				+0.9
5,341,878	+				-1.9
5,341,878	+				-0.5
5,341,879	-				-0.2
5,341,879	-				+0.5
5,341,879	-				+3.7
5,341,879	-				+1.6
5,341,879	-				+0.6
5,341,879	-				+1.8
5,341,879	-				-1.2
5,341,879	-				+1.1
5,341,879	-				-0.5
5,341,881	-				-0.5
5,342,016	+				+0.6
5,342,016	+				-0.4
5,342,086	+				+1.4
5,342,086	+				-1.5
5,342,086	+				-3.1
5,342,086	+				+2.1
5,342,086	+				+0.7
5,342,086	+				-2.6
5,342,086	+				+5.4
5,342,086	+				+0.4
5,342,086	+				-0.9
5,342,086	+				-2.0
5,342,086	+				-2.2
5,342,086	+				-0.9
5,342,086	+				-2.0
5,342,086	+				+0.1
5,342,086	+				-0.2
5,342,086	+				+1.9
5,342,086	+				-1.6
5,342,086	+				-0.7
5,342,086	+				+2.3
5,342,086	+				-1.7
5,342,086	+				-1.2
5,342,086	+				-0.5
5,342,086	+				+2.2
5,342,086	+				+3.7
5,342,086	+				+0.1
5,342,086	+				-1.1
5,342,086	+				+4.7
5,342,086	+				+0.4
5,342,086	+				-1.8
5,342,087	-				-2.8
5,342,087	-				+1.2
5,342,087	-				+1.0
5,342,087	-				-1.3
5,342,087	-				+2.1
5,342,087	-				+0.1
5,342,087	-				-1.8
5,342,087	-				-1.1
5,342,087	-				-0.0
5,342,087	-				+0.4
5,342,087	-				+3.3
5,342,087	-				+1.5
5,342,087	-				-0.3
5,342,087	-				+0.1
5,342,087	-				+2.2
5,342,087	-				+0.1
5,342,087	-				+0.5
5,342,087	-				-2.9
5,342,087	-				-2.3
5,342,087	-				+1.0
5,342,087	-				+0.1
5,342,087	-				-1.9
5,342,087	-				-1.4
5,342,087	-				+0.3
5,342,087	-				-2.1
5,342,087	-				+1.2
5,342,087	-				-1.7
5,342,087	-				+2.2
5,342,087	-				+0.9
5,342,088	+				-1.4
5,342,088	+				-1.9
5,342,088	+				-1.5
5,342,088	+				+1.1
5,342,089	-				+0.3
5,342,089	-				+1.1
5,342,089	-				+1.8
5,342,089	-				+2.7
5,342,089	-				-1.4
5,342,089	-				+1.1
5,342,099	+				+2.1
5,342,099	+				-1.2
5,342,100	-				+0.4
5,342,100	-				-0.9
5,342,106	+				-0.5
5,342,106	+				+2.3
5,342,106	+				-2.2
5,342,106	+				-1.6
5,342,107	-				+0.5
5,342,107	-				-2.2
5,342,107	-				+0.4
5,342,107	-				-3.0
5,342,107	-				-1.1
5,342,143	+				-1.2
5,342,143	+				-1.9
5,342,143	+				-0.9
5,342,143	+				+3.7
5,342,143	+				-0.1
5,342,143	+				-2.4
5,342,143	+				-0.5
5,342,143	+				-0.2
5,342,143	+				-0.5
5,342,143	+				-0.3
5,342,143	+				-1.1
5,342,143	+				+1.0
5,342,143	+				-0.2
5,342,143	+				+1.8
5,342,143	+				+2.1
5,342,143	+				-2.9
5,342,143	+				+2.9
5,342,143	+				-0.2
5,342,143	+				-1.0
5,342,143	+				+1.7
5,342,143	+				-1.7
5,342,143	+				-1.7
5,342,143	+				+0.1
5,342,144	-				+1.1
5,342,144	-				-0.2
5,342,144	-				-1.9
5,342,144	-				-0.9
5,342,144	-				+1.0
5,342,144	-				-1.3
5,342,144	-				-1.5
5,342,144	-				+1.1
5,342,144	-				+0.5
5,342,144	-				+0.5
5,342,144	-				+1.9
5,342,144	-				+2.2
5,342,144	-				+1.4
5,342,144	-				+1.5
5,342,144	-				-2.2
5,342,144	-				-1.3
5,342,144	-				+0.1
5,342,144	-				-0.7
5,342,144	-				-1.4
5,342,144	-				-2.4
5,342,147	+				+1.6
5,342,147	+				+1.8
5,342,147	+				-0.7
5,342,147	+				+1.3
5,342,147	+				+1.9
5,342,147	+				-1.4
5,342,147	+				-1.1
5,342,147	+				+1.1
5,342,147	+				-0.7
5,342,147	+				+0.6
5,342,147	+				+0.9
5,342,147	+				-1.5
5,342,147	+				+0.1
5,342,147	+				-0.1
5,342,147	+				+0.5
5,342,147	+				-1.5
5,342,147	+				+0.1
5,342,147	+				+1.9
5,342,147	+				+2.1
5,342,147	+				-1.1
5,342,147	+				+0.5
5,342,147	+				-0.7
5,342,147	+				-0.5
5,342,147	+				-1.1
5,342,147	+				+1.8
5,342,147	+				+2.1
5,342,147	+				+0.1
5,342,147	+				+2.4
5,342,147	+				-0.7
5,342,147	+				+1.9
5,342,147	+				-0.2
5,342,147	+				-0.2
5,342,147	+				-1.2
5,342,147	+				+1.7
5,342,147	+				+1.5
5,342,147	+				+1.4
5,342,147	+				-0.9
5,342,147	+				-0.5
5,342,147	+				+0.7
5,342,147	+				-0.7
5,342,147	+				+0.1
5,342,147	+				-1.6
5,342,147	+				-0.7
5,342,147	+				+1.9
5,342,147	+				+2.7
5,342,147	+				-1.3
5,342,147	+				-0.2
5,342,147	+				-0.1
5,342,147	+				-0.7
5,342,147	+				-0.9
5,342,147	+				+1.7
5,342,147	+				+0.8
5,342,147	+				+1.6
5,342,147	+				+1.4
5,342,147	+				+2.6
5,342,147	+				+5.5
5,342,147	+				+2.8
5,342,147	+				-1.2
5,342,148	-				+0.3
5,342,148	-				-0.5
5,342,148	-				+0.8
5,342,148	-				-1.0
5,342,148	-				+1.3
5,342,148	-				-0.8
5,342,148	-				-0.5
5,342,148	-				+2.4
5,342,148	-				-0.2
5,342,148	-				+0.9
5,342,148	-				-0.1
5,342,148	-				-0.7
5,342,148	-				-0.5
5,342,148	-				+0.9
5,342,148	-				-0.8
5,342,148	-				+0.3
5,342,148	-				+0.4
5,342,148	-				-0.2
5,342,148	-				+1.0
5,342,148	-				-0.6
5,342,148	-				+1.1
5,342,148	-				-0.9
5,342,148	-				+0.8
5,342,148	-				+2.4
5,342,148	-				-1.6
5,342,148	-				+3.5
5,342,148	-				+0.6
5,342,148	-				-1.2
5,342,148	-				+0.1
5,342,148	-				+1.3
5,342,148	-				+0.2
5,342,148	-				-0.2
5,342,148	-				-0.8
5,342,148	-				-0.9
5,342,148	-				+0.1
5,342,148	-				+1.1
5,342,148	-				-1.6
5,342,148	-				+0.8
5,342,148	-				+1.8
5,342,148	-				+1.7
5,342,148	-				-1.6
5,342,148	-				+0.5
5,342,148	-				-2.5
5,342,148	-				+1.3
5,342,148	-				-0.5
5,342,148	-				-1.2
5,342,148	-				+0.9
5,342,148	-				-2.4
5,342,148	-				+0.9
5,342,148	-				+0.8
5,342,148	-				+1.1
5,342,148	-				+1.1
5,342,151	+				-0.7
5,342,151	+				+0.6
5,342,151	+				-0.0
5,342,151	+				-1.8
5,342,152	-				-0.3
5,342,152	-				+0.9
5,342,152	-				-1.2
5,342,181	-				-1.2
5,342,181	-				+1.5
5,342,181	-				-1.1
5,342,181	-				-0.7
5,342,181	-				-1.5
5,342,181	-				-3.0
5,342,200	+				+0.4
5,342,200	+				+2.8
5,342,200	+				+2.0
5,342,201	-				-0.9
5,342,201	-				-0.7
5,342,253	-				+2.6
5,342,455	+		PFLU_RS23830	0.15	+0.1
5,342,455	+		PFLU_RS23830	0.15	+4.6
5,342,455	+		PFLU_RS23830	0.15	+2.7
5,342,455	+		PFLU_RS23830	0.15	+3.4
5,342,455	+		PFLU_RS23830	0.15	+1.9
5,342,455	+		PFLU_RS23830	0.15	+2.9
5,342,455	+		PFLU_RS23830	0.15	+0.2
5,342,455	+		PFLU_RS23830	0.15	-0.5
5,342,455	+		PFLU_RS23830	0.15	+1.7
5,342,455	+		PFLU_RS23830	0.15	+4.0
5,342,455	+		PFLU_RS23830	0.15	+3.9
5,342,455	+		PFLU_RS23830	0.15	+3.0
5,342,455	+		PFLU_RS23830	0.15	+1.6
5,342,455	+		PFLU_RS23830	0.15	+1.1
5,342,455	+		PFLU_RS23830	0.15	+4.3
5,342,455	+		PFLU_RS23830	0.15	+1.1
5,342,455	+		PFLU_RS23830	0.15	+3.5
5,342,455	+		PFLU_RS23830	0.15	+3.3
5,342,455	+		PFLU_RS23830	0.15	+4.4
5,342,455	+		PFLU_RS23830	0.15	+3.5
5,342,456	-		PFLU_RS23830	0.15	+6.2
5,342,456	-		PFLU_RS23830	0.15	+3.7
5,342,456	-		PFLU_RS23830	0.15	-0.5
5,342,456	-		PFLU_RS23830	0.15	+4.5
5,342,456	-		PFLU_RS23830	0.15	+2.9
5,342,456	-		PFLU_RS23830	0.15	+3.8
5,342,456	-		PFLU_RS23830	0.15	-1.1
5,342,456	-		PFLU_RS23830	0.15	-1.6
5,342,456	-		PFLU_RS23830	0.15	+3.4
5,342,456	-		PFLU_RS23830	0.15	+4.2
5,342,456	-		PFLU_RS23830	0.15	+1.7
5,342,456	-		PFLU_RS23830	0.15	+1.1
5,342,456	-		PFLU_RS23830	0.15	-0.2
5,342,469	+		PFLU_RS23830	0.16	+3.4
5,342,533	+		PFLU_RS23830	0.20	+0.1
5,342,533	+		PFLU_RS23830	0.20	+2.1
5,342,533	+		PFLU_RS23830	0.20	+4.0
5,342,533	+		PFLU_RS23830	0.20	+4.2
5,342,534	-		PFLU_RS23830	0.20	+0.9
5,342,534	-		PFLU_RS23830	0.20	+3.7
5,342,534	-		PFLU_RS23830	0.20	-0.6
5,342,534	-		PFLU_RS23830	0.20	+3.5
5,342,534	-		PFLU_RS23830	0.20	+4.1
5,342,534	-		PFLU_RS23830	0.20	-0.2
5,342,534	-		PFLU_RS23830	0.20	-0.5
5,342,534	-		PFLU_RS23830	0.20	+2.5
5,342,800	+		PFLU_RS23830	0.39	+3.7
5,342,800	+		PFLU_RS23830	0.39	-0.9
5,342,800	+		PFLU_RS23830	0.39	-0.7
5,342,800	+		PFLU_RS23830	0.39	+4.1
5,342,800	+		PFLU_RS23830	0.39	+3.4
5,342,801	-		PFLU_RS23830	0.39	+3.7
5,342,801	-		PFLU_RS23830	0.39	+2.1
5,342,801	-		PFLU_RS23830	0.39	+2.1
5,343,001	+		PFLU_RS23830	0.53	-0.2
5,343,001	+		PFLU_RS23830	0.53	+3.1
5,343,001	+		PFLU_RS23830	0.53	+4.9
5,343,001	+		PFLU_RS23830	0.53	+5.3
5,343,001	+		PFLU_RS23830	0.53	-0.5
5,343,001	+		PFLU_RS23830	0.53	+2.2
5,343,002	-		PFLU_RS23830	0.53	+0.5
5,343,002	-		PFLU_RS23830	0.53	+3.4
5,343,002	-		PFLU_RS23830	0.53	-0.2
5,343,053	+		PFLU_RS23830	0.56	+1.9
5,343,053	+		PFLU_RS23830	0.56	+1.9
5,343,053	+		PFLU_RS23830	0.56	+0.1
5,343,054	-		PFLU_RS23830	0.56	+1.1
5,343,054	-		PFLU_RS23830	0.56	+0.3
5,343,054	-		PFLU_RS23830	0.56	+1.1
5,343,054	-		PFLU_RS23830	0.56	+3.2
5,343,054	-		PFLU_RS23830	0.56	+0.8
5,343,054	-		PFLU_RS23830	0.56	+3.1
5,343,054	-		PFLU_RS23830	0.56	+4.4
5,343,054	-		PFLU_RS23830	0.56	+3.9
5,343,054	-		PFLU_RS23830	0.56	-0.7
5,343,205	+		PFLU_RS23830	0.67	+3.6
5,343,205	+		PFLU_RS23830	0.67	-1.2
5,343,205	+		PFLU_RS23830	0.67	-1.7
5,343,205	+		PFLU_RS23830	0.67	+3.9
5,343,206	-		PFLU_RS23830	0.67	+3.1
5,343,206	-		PFLU_RS23830	0.67	+1.6
5,343,206	-		PFLU_RS23830	0.67	+0.7
5,343,244	+		PFLU_RS23830	0.69	+1.1
5,343,244	+		PFLU_RS23830	0.69	-2.5
5,343,277	-		PFLU_RS23830	0.72	+4.9
5,343,316	+		PFLU_RS23830	0.74	+3.2
5,343,316	+		PFLU_RS23830	0.74	+2.3
5,343,316	+		PFLU_RS23830	0.74	+5.7
5,343,316	+		PFLU_RS23830	0.74	+3.8
5,343,316	+		PFLU_RS23830	0.74	-0.2
5,343,316	+		PFLU_RS23830	0.74	+2.1
5,343,316	+		PFLU_RS23830	0.74	-1.2
5,343,316	+		PFLU_RS23830	0.74	-1.2
5,343,316	+		PFLU_RS23830	0.74	+0.5
5,343,316	+		PFLU_RS23830	0.74	+2.7
5,343,316	+		PFLU_RS23830	0.74	+1.8
5,343,316	+		PFLU_RS23830	0.74	+4.0
5,343,316	+		PFLU_RS23830	0.74	+2.1
5,343,316	+		PFLU_RS23830	0.74	+3.7
5,343,316	+		PFLU_RS23830	0.74	+3.2
5,343,316	+		PFLU_RS23830	0.74	+2.5
5,343,316	+		PFLU_RS23830	0.74	+0.5
5,343,316	+		PFLU_RS23830	0.74	+1.6
5,343,316	+		PFLU_RS23830	0.74	-1.4
5,343,316	+		PFLU_RS23830	0.74	+0.1
5,343,316	+		PFLU_RS23830	0.74	+2.9
5,343,316	+		PFLU_RS23830	0.74	+0.5
5,343,316	+		PFLU_RS23830	0.74	+0.2
5,343,316	+		PFLU_RS23830	0.74	+2.6
5,343,316	+		PFLU_RS23830	0.74	+3.7
5,343,317	-		PFLU_RS23830	0.74	+0.3
5,343,317	-		PFLU_RS23830	0.74	+0.7
5,343,317	-		PFLU_RS23830	0.74	+0.5
5,343,317	-		PFLU_RS23830	0.74	+3.5
5,343,317	-		PFLU_RS23830	0.74	+2.3
5,343,317	-		PFLU_RS23830	0.74	+4.5
5,343,317	-		PFLU_RS23830	0.74	+3.7
5,343,317	-		PFLU_RS23830	0.74	-0.9
5,343,317	-		PFLU_RS23830	0.74	-0.9
5,343,317	-		PFLU_RS23830	0.74	+3.6
5,343,317	-		PFLU_RS23830	0.74	+0.8
5,343,317	-		PFLU_RS23830	0.74	+3.0
5,343,317	-		PFLU_RS23830	0.74	+1.7
5,343,317	-		PFLU_RS23830	0.74	+3.5
5,343,317	-		PFLU_RS23830	0.74	+1.5
5,343,317	-		PFLU_RS23830	0.74	+1.1
5,343,317	-		PFLU_RS23830	0.74	+2.8
5,343,318	+		PFLU_RS23830	0.74	+2.6
5,343,319	-		PFLU_RS23830	0.74	+2.6
5,343,319	-		PFLU_RS23830	0.74	+0.3
5,343,379	+		PFLU_RS23830	0.79	+4.0
5,343,379	+		PFLU_RS23830	0.79	+3.9
5,343,380	-		PFLU_RS23830	0.79	+4.2
5,343,380	-		PFLU_RS23830	0.79	+2.6
5,343,380	-		PFLU_RS23830	0.79	+2.8
5,343,380	-		PFLU_RS23830	0.79	-0.2
5,343,522	+		PFLU_RS23830	0.88	-0.2
5,343,522	+		PFLU_RS23830	0.88	-1.5
5,343,522	+		PFLU_RS23830	0.88	+3.7
5,343,522	+		PFLU_RS23830	0.88	+1.3
5,343,523	-		PFLU_RS23830	0.88	-0.2
5,343,523	-		PFLU_RS23830	0.88	+3.4
5,343,523	-		PFLU_RS23830	0.88	+4.9
5,343,648	+				+1.1
5,343,648	+				+5.0
5,343,648	+				+5.7
5,343,648	+				-0.7
5,343,648	+				-1.1
5,343,648	+				+2.8
5,343,648	+				+5.0
5,343,648	+				+3.3
5,343,648	+				+2.6
5,343,648	+				+0.3
5,343,648	+				+1.4
5,343,648	+				+7.0
5,343,649	-				-1.5
5,343,649	-				+3.4
5,343,649	-				+0.8
5,343,649	-				+1.8
5,343,649	-				+2.0
5,343,649	-				-0.2
5,343,649	-				-0.5
5,343,795	+		PFLU_RS23835	0.14	+0.9
5,343,795	+		PFLU_RS23835	0.14	-3.2
5,343,796	-		PFLU_RS23835	0.14	-1.2
5,343,796	-		PFLU_RS23835	0.14	+0.8
5,343,796	-		PFLU_RS23835	0.14	+2.2
5,343,834	+		PFLU_RS23835	0.18	-0.9
5,343,834	+		PFLU_RS23835	0.18	-2.2
5,343,834	+		PFLU_RS23835	0.18	+0.6
5,343,835	-		PFLU_RS23835	0.18	-1.2
5,343,835	-		PFLU_RS23835	0.18	+2.5
5,343,835	-		PFLU_RS23835	0.18	-0.2
5,343,835	-		PFLU_RS23835	0.18	-1.5
5,343,958	+		PFLU_RS23835	0.29	-2.4
5,343,958	+		PFLU_RS23835	0.29	+2.0
5,343,958	+		PFLU_RS23835	0.29	+4.5
5,343,959	-		PFLU_RS23835	0.29	-0.2
5,344,038	+		PFLU_RS23835	0.37	-0.3
5,344,038	+		PFLU_RS23835	0.37	-2.8
5,344,039	-		PFLU_RS23835	0.37	+1.4
5,344,134	+		PFLU_RS23835	0.46	-1.6
5,344,134	+		PFLU_RS23835	0.46	+1.0
5,344,174	+		PFLU_RS23835	0.50	+0.1
5,344,174	+		PFLU_RS23835	0.50	-1.1
5,344,174	+		PFLU_RS23835	0.50	-3.0
5,344,174	+		PFLU_RS23835	0.50	-0.6
5,344,175	-		PFLU_RS23835	0.50	+1.0
5,344,175	-		PFLU_RS23835	0.50	+0.5
5,344,175	-		PFLU_RS23835	0.50	-1.1
5,344,175	-		PFLU_RS23835	0.50	+1.1
5,344,175	-		PFLU_RS23835	0.50	-2.1
5,344,175	-		PFLU_RS23835	0.50	-0.4
5,344,175	-		PFLU_RS23835	0.50	+2.1
5,344,176	+		PFLU_RS23835	0.50	-2.4
5,344,177	-		PFLU_RS23835	0.50	-1.5
5,344,342	-		PFLU_RS23835	0.66	+1.1
5,344,342	-		PFLU_RS23835	0.66	+1.0
5,344,399	-		PFLU_RS23835	0.71	-1.8
5,344,399	-		PFLU_RS23835	0.71	-1.4
5,344,414	+		PFLU_RS23835	0.72	+1.4
5,344,415	-		PFLU_RS23835	0.73	-2.2
5,344,415	-		PFLU_RS23835	0.73	-0.6
5,344,415	-		PFLU_RS23835	0.73	+1.9
5,344,452	+		PFLU_RS23835	0.76	+1.4
5,344,599	+		PFLU_RS23835	0.90	+0.4
5,344,599	+		PFLU_RS23835	0.90	+1.2
5,344,599	+		PFLU_RS23835	0.90	-0.2
5,344,600	-				-1.0
5,344,600	-				+1.6
5,344,664	+				-3.4
5,344,664	+				-0.5
5,344,665	-				+1.5