Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22130

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
4,977,580	+		PFLU_RS22120	0.49	-1.9
4,977,580	+		PFLU_RS22120	0.49	+0.2
4,977,580	+		PFLU_RS22120	0.49	-2.0
4,977,580	+		PFLU_RS22120	0.49	+0.2
4,977,580	+		PFLU_RS22120	0.49	-0.8
4,977,580	+		PFLU_RS22120	0.49	+1.0
4,977,580	+		PFLU_RS22120	0.49	-1.3
4,977,580	+		PFLU_RS22120	0.49	-0.7
4,977,580	+		PFLU_RS22120	0.49	-2.5
4,977,580	+		PFLU_RS22120	0.49	-2.1
4,977,580	+		PFLU_RS22120	0.49	+2.6
4,977,580	+		PFLU_RS22120	0.49	-1.6
4,977,580	+		PFLU_RS22120	0.49	+1.3
4,977,580	+		PFLU_RS22120	0.49	+2.3
4,977,581	-		PFLU_RS22120	0.50	+0.2
4,977,581	-		PFLU_RS22120	0.50	-0.3
4,977,581	-		PFLU_RS22120	0.50	-0.3
4,977,581	-		PFLU_RS22120	0.50	-1.5
4,977,581	-		PFLU_RS22120	0.50	+0.5
4,977,581	-		PFLU_RS22120	0.50	-0.7
4,977,581	-		PFLU_RS22120	0.50	-0.8
4,977,581	-		PFLU_RS22120	0.50	-2.0
4,977,581	-		PFLU_RS22120	0.50	+0.9
4,977,581	-		PFLU_RS22120	0.50	+0.3
4,977,581	-		PFLU_RS22120	0.50	+0.4
4,977,686	+		PFLU_RS22120	0.61	-0.2
4,977,686	+		PFLU_RS22120	0.61	-1.6
4,977,686	+		PFLU_RS22120	0.61	-1.7
4,977,686	+		PFLU_RS22120	0.61	+0.2
4,977,686	+		PFLU_RS22120	0.61	-2.0
4,977,686	+		PFLU_RS22120	0.61	+3.0
4,977,687	-		PFLU_RS22120	0.61	+1.3
4,977,687	-		PFLU_RS22120	0.61	-0.1
4,977,687	-		PFLU_RS22120	0.61	+0.8
4,977,815	+		PFLU_RS22120	0.74	-1.6
4,977,815	+		PFLU_RS22120	0.74	+2.2
4,977,815	+		PFLU_RS22120	0.74	+1.6
4,977,815	+		PFLU_RS22120	0.74	-1.2
4,977,815	+		PFLU_RS22120	0.74	-1.7
4,977,815	+		PFLU_RS22120	0.74	+0.8
4,977,816	-		PFLU_RS22120	0.74	+1.0
4,977,816	-		PFLU_RS22120	0.74	-2.6
4,977,816	-		PFLU_RS22120	0.74	-1.9
4,977,829	+		PFLU_RS22120	0.76	-1.0
4,977,975	-				+0.8
4,978,020	-				-1.6
4,978,020	-				-2.5
4,978,020	-				+0.9
4,978,035	+				-1.1
4,978,035	+				-1.2
4,978,036	-				-1.7
4,978,036	-				-0.8
4,978,132	+		PFLU_RS22125	0.17	+5.1
4,978,132	+		PFLU_RS22125	0.17	+4.5
4,978,132	+		PFLU_RS22125	0.17	+6.5
4,978,133	-		PFLU_RS22125	0.17	-1.2
4,978,133	-		PFLU_RS22125	0.17	-1.5
4,978,133	-		PFLU_RS22125	0.17	+0.7
4,978,171	+		PFLU_RS22125	0.26	+5.3
4,978,171	+		PFLU_RS22125	0.26	+6.2
4,978,171	+		PFLU_RS22125	0.26	+5.3
4,978,171	+		PFLU_RS22125	0.26	+5.7
4,978,171	+		PFLU_RS22125	0.26	+4.4
4,978,171	+		PFLU_RS22125	0.26	+4.9
4,978,171	+		PFLU_RS22125	0.26	+5.3
4,978,171	+		PFLU_RS22125	0.26	+5.1
4,978,171	+		PFLU_RS22125	0.26	+5.0
4,978,172	-		PFLU_RS22125	0.26	+1.9
4,978,172	-		PFLU_RS22125	0.26	+0.9
4,978,172	-		PFLU_RS22125	0.26	-1.9
4,978,172	-		PFLU_RS22125	0.26	-0.3
4,978,172	-		PFLU_RS22125	0.26	+2.3
4,978,172	-		PFLU_RS22125	0.26	-1.1
4,978,172	-		PFLU_RS22125	0.26	+1.0
4,978,172	-		PFLU_RS22125	0.26	-2.2
4,978,172	-		PFLU_RS22125	0.26	+1.8
4,978,172	-		PFLU_RS22125	0.26	-1.8
4,978,207	+		PFLU_RS22125	0.35	+7.0
4,978,207	+		PFLU_RS22125	0.35	+4.6
4,978,509	+				-1.6
4,978,509	+				+1.1
4,978,512	+				+0.9
4,978,512	+				-2.1
4,978,524	+				-0.3
4,978,524	+				-2.2
4,978,524	+				+1.6
4,978,524	+				+2.0
4,978,524	+				-0.3
4,978,525	-				+1.7
4,978,525	-				-1.6
4,978,525	-				+1.3
4,978,525	-				+0.3
4,978,525	-				+0.2
4,978,525	-				-2.7
4,978,525	-				-1.8
4,978,531	-				+2.3
4,978,541	+				-0.3
4,978,581	+				+0.7
4,978,582	-				-1.3
4,978,582	-				+0.3
4,978,957	+		PFLU_RS22130	0.31	-2.2
4,978,996	+		PFLU_RS22130	0.34	+2.7
4,978,996	+		PFLU_RS22130	0.34	-2.6
4,978,996	+		PFLU_RS22130	0.34	+2.2
4,978,997	-		PFLU_RS22130	0.34	-0.8
4,978,997	-		PFLU_RS22130	0.34	-1.5
4,978,997	-		PFLU_RS22130	0.34	+0.1
4,979,114	+		PFLU_RS22130	0.42	-1.5
4,979,114	+		PFLU_RS22130	0.42	+1.0
4,979,114	+		PFLU_RS22130	0.42	+2.0
4,979,114	+		PFLU_RS22130	0.42	+1.4
4,979,114	+		PFLU_RS22130	0.42	+1.3
4,979,115	-		PFLU_RS22130	0.42	+1.2
4,979,115	-		PFLU_RS22130	0.42	-0.4
4,979,115	-		PFLU_RS22130	0.42	+0.4
4,979,218	+		PFLU_RS22130	0.49	+1.3
4,979,218	+		PFLU_RS22130	0.49	+1.3
4,979,218	+		PFLU_RS22130	0.49	+2.2
4,979,218	+		PFLU_RS22130	0.49	+2.5
4,979,219	-		PFLU_RS22130	0.49	+0.2
4,979,219	-		PFLU_RS22130	0.49	+2.6
4,979,219	-		PFLU_RS22130	0.49	-1.2
4,979,219	-		PFLU_RS22130	0.49	+1.2
4,979,219	-		PFLU_RS22130	0.49	+0.6
4,979,219	-		PFLU_RS22130	0.49	-0.9
4,979,219	-		PFLU_RS22130	0.49	-3.1
4,979,219	-		PFLU_RS22130	0.49	-1.0
4,979,286	-		PFLU_RS22130	0.54	-3.8
4,979,344	+		PFLU_RS22130	0.58	+1.6
4,979,344	+		PFLU_RS22130	0.58	+2.6
4,979,345	-		PFLU_RS22130	0.58	+0.0
4,979,345	-		PFLU_RS22130	0.58	+1.2
4,979,345	-		PFLU_RS22130	0.58	+0.9
4,979,345	-		PFLU_RS22130	0.58	+0.5
4,979,345	-		PFLU_RS22130	0.58	+2.3
4,979,345	-		PFLU_RS22130	0.58	-0.2
4,979,345	-		PFLU_RS22130	0.58	-1.6
4,979,345	-		PFLU_RS22130	0.58	-0.8
4,979,358	+		PFLU_RS22130	0.59	-0.6
4,979,358	+		PFLU_RS22130	0.59	-0.5
4,979,358	+		PFLU_RS22130	0.59	+2.0
4,979,358	+		PFLU_RS22130	0.59	+3.2
4,979,359	-		PFLU_RS22130	0.59	-1.9
4,979,359	-		PFLU_RS22130	0.59	+1.1
4,979,359	-		PFLU_RS22130	0.59	-2.6
4,979,359	-		PFLU_RS22130	0.59	+0.8
4,979,362	+		PFLU_RS22130	0.59	+1.2
4,979,362	+		PFLU_RS22130	0.59	+2.8
4,979,362	+		PFLU_RS22130	0.59	+0.8
4,979,362	+		PFLU_RS22130	0.59	+2.2
4,979,362	+		PFLU_RS22130	0.59	+2.3
4,979,362	+		PFLU_RS22130	0.59	+2.8
4,979,362	+		PFLU_RS22130	0.59	+1.0
4,979,362	+		PFLU_RS22130	0.59	+3.9
4,979,362	+		PFLU_RS22130	0.59	+3.8
4,979,362	+		PFLU_RS22130	0.59	+1.7
4,979,362	+		PFLU_RS22130	0.59	+1.2
4,979,362	+		PFLU_RS22130	0.59	+3.4
4,979,362	+		PFLU_RS22130	0.59	+3.0
4,979,362	+		PFLU_RS22130	0.59	+2.9
4,979,362	+		PFLU_RS22130	0.59	+2.5
4,979,362	+		PFLU_RS22130	0.59	+1.9
4,979,362	+		PFLU_RS22130	0.59	+0.3
4,979,362	+		PFLU_RS22130	0.59	+1.1
4,979,362	+		PFLU_RS22130	0.59	+2.2
4,979,362	+		PFLU_RS22130	0.59	+1.3
4,979,362	+		PFLU_RS22130	0.59	+2.1
4,979,362	+		PFLU_RS22130	0.59	+2.6
4,979,362	+		PFLU_RS22130	0.59	+2.7
4,979,362	+		PFLU_RS22130	0.59	+0.0
4,979,362	+		PFLU_RS22130	0.59	+3.6
4,979,362	+		PFLU_RS22130	0.59	+4.1
4,979,362	+		PFLU_RS22130	0.59	+0.0
4,979,362	+		PFLU_RS22130	0.59	+2.4
4,979,362	+		PFLU_RS22130	0.59	+2.7
4,979,362	+		PFLU_RS22130	0.59	+2.7
4,979,362	+		PFLU_RS22130	0.59	+1.8
4,979,362	+		PFLU_RS22130	0.59	+1.6
4,979,362	+		PFLU_RS22130	0.59	+0.4
4,979,362	+		PFLU_RS22130	0.59	+1.9
4,979,362	+		PFLU_RS22130	0.59	+2.5
4,979,362	+		PFLU_RS22130	0.59	+1.4
4,979,362	+		PFLU_RS22130	0.59	-0.6
4,979,362	+		PFLU_RS22130	0.59	+2.0
4,979,362	+		PFLU_RS22130	0.59	+4.0
4,979,362	+		PFLU_RS22130	0.59	+1.8
4,979,362	+		PFLU_RS22130	0.59	-0.8
4,979,363	-		PFLU_RS22130	0.59	+2.4
4,979,363	-		PFLU_RS22130	0.59	+0.2
4,979,363	-		PFLU_RS22130	0.59	-2.2
4,979,363	-		PFLU_RS22130	0.59	-0.1
4,979,363	-		PFLU_RS22130	0.59	+1.1
4,979,363	-		PFLU_RS22130	0.59	-0.6
4,979,363	-		PFLU_RS22130	0.59	+2.3
4,979,363	-		PFLU_RS22130	0.59	+0.2
4,979,363	-		PFLU_RS22130	0.59	-1.5
4,979,363	-		PFLU_RS22130	0.59	+0.1
4,979,363	-		PFLU_RS22130	0.59	+1.4
4,979,363	-		PFLU_RS22130	0.59	-2.4
4,979,363	-		PFLU_RS22130	0.59	-0.3
4,979,363	-		PFLU_RS22130	0.59	-0.8
4,979,363	-		PFLU_RS22130	0.59	-0.3
4,979,363	-		PFLU_RS22130	0.59	-0.9
4,979,363	-		PFLU_RS22130	0.59	+0.3
4,979,363	-		PFLU_RS22130	0.59	-1.6
4,979,363	-		PFLU_RS22130	0.59	-0.3
4,979,363	-		PFLU_RS22130	0.59	-0.4
4,979,363	-		PFLU_RS22130	0.59	+0.2
4,979,363	-		PFLU_RS22130	0.59	+0.9
4,979,363	-		PFLU_RS22130	0.59	-1.6
4,979,363	-		PFLU_RS22130	0.59	+0.2
4,979,363	-		PFLU_RS22130	0.59	+1.4
4,979,363	-		PFLU_RS22130	0.59	+1.2
4,979,363	-		PFLU_RS22130	0.59	+0.7
4,979,363	-		PFLU_RS22130	0.59	-0.2
4,979,363	-		PFLU_RS22130	0.59	+1.8
4,979,363	-		PFLU_RS22130	0.59	-0.6
4,979,363	-		PFLU_RS22130	0.59	+0.1
4,979,363	-		PFLU_RS22130	0.59	+2.0
4,979,461	+		PFLU_RS22130	0.66	+0.3
4,979,461	+		PFLU_RS22130	0.66	+1.8
4,979,461	+		PFLU_RS22130	0.66	+3.9
4,979,461	+		PFLU_RS22130	0.66	+1.9
4,979,461	+		PFLU_RS22130	0.66	+2.4
4,979,461	+		PFLU_RS22130	0.66	+2.5
4,979,461	+		PFLU_RS22130	0.66	+1.6
4,979,462	-		PFLU_RS22130	0.66	+4.7
4,979,462	-		PFLU_RS22130	0.66	-0.2
4,979,680	+		PFLU_RS22130	0.81	+2.2
4,979,680	+		PFLU_RS22130	0.81	-1.0
4,979,680	+		PFLU_RS22130	0.81	+4.6
4,979,680	+		PFLU_RS22130	0.81	+1.9
4,979,680	+		PFLU_RS22130	0.81	-1.2
4,979,680	+		PFLU_RS22130	0.81	+3.1
4,979,681	-		PFLU_RS22130	0.81	+1.2
4,979,681	-		PFLU_RS22130	0.81	-1.0
4,979,681	-		PFLU_RS22130	0.81	-3.2
4,979,681	-		PFLU_RS22130	0.81	-1.1
4,979,681	-		PFLU_RS22130	0.81	-1.3
4,979,863	-				+0.6
4,979,863	-				+0.2
4,979,863	-				+0.7
4,979,902	+				+3.3
4,979,902	+				+3.8
4,979,902	+				+0.1
4,979,902	+				+3.9
4,979,902	+				+3.0
4,979,902	+				+2.4
4,979,903	-				-1.6
4,979,903	-				+0.6
4,979,903	-				+1.1
4,979,903	-				+0.2
4,979,903	-				-0.6
4,979,903	-				-0.8
4,979,903	-				+0.0
4,979,903	-				+1.3
4,979,903	-				-0.8
4,979,903	-				-0.3
4,979,903	-				-2.8
4,979,944	+				+4.2
4,979,945	-				-0.3
4,980,099	-				+0.9
4,980,130	+				+0.0
4,980,130	+				-0.8
4,980,130	+				-0.3
4,980,131	-				-0.0
4,980,131	-				+1.3
4,980,131	-				+2.3
4,980,139	+				+2.1
4,980,139	+				+1.8
4,980,139	+				+0.6
4,980,139	+				-0.7
4,980,140	-				+1.5
4,980,140	-				-0.8
4,980,140	-				-2.1
4,980,140	-				+2.4
4,980,140	-				-1.8
4,980,147	+				-2.1
4,980,147	+				-0.6
4,980,147	+				-1.2
4,980,148	-				-2.0
4,980,148	-				-0.2
4,980,148	-				-1.5
4,980,148	-				-0.5
4,980,148	-				+0.0
4,980,148	-				-1.2
4,980,148	-				-1.5
4,980,148	-				+0.8
4,980,174	+				+2.6
4,980,175	-				+0.0
4,980,177	+				-1.0
4,980,177	+				-1.0
4,980,211	-				-0.1
4,980,211	-				-2.2
4,980,211	-				-1.7
4,980,227	+				-0.4
4,980,227	+				-0.2
4,980,227	+				+0.4
4,980,227	+				+0.8
4,980,228	-				-1.7
4,980,228	-				-1.3
4,980,228	-				+1.0
4,980,228	-				+0.3
4,980,228	-				+0.8
4,980,246	+				-1.0
4,980,246	+				-1.5
4,980,246	+				+0.2
4,980,247	-				+1.1
4,980,247	-				-1.1
4,980,247	-				+1.0
4,980,247	-				-1.0
4,980,247	-				-0.3
4,980,247	-				+0.1
4,980,247	-				-0.4
4,980,247	-				-1.5
4,980,247	-				-1.1
4,980,271	+		PFLU_RS22135	0.11	+0.0
4,980,287	+		PFLU_RS22135	0.12	-0.7
4,980,287	+		PFLU_RS22135	0.12	-2.3
4,980,288	-		PFLU_RS22135	0.12	+2.9
4,980,312	+		PFLU_RS22135	0.14	-0.8
4,980,312	+		PFLU_RS22135	0.14	+1.0
4,980,312	+		PFLU_RS22135	0.14	+2.4
4,980,312	+		PFLU_RS22135	0.14	+1.2
4,980,312	+		PFLU_RS22135	0.14	+1.5
4,980,312	+		PFLU_RS22135	0.14	+0.7
4,980,312	+		PFLU_RS22135	0.14	+1.0
4,980,312	+		PFLU_RS22135	0.14	+0.5
4,980,312	+		PFLU_RS22135	0.14	-3.2
4,980,313	-		PFLU_RS22135	0.14	+2.1
4,980,313	-		PFLU_RS22135	0.14	-2.6
4,980,313	-		PFLU_RS22135	0.14	-1.3
4,980,313	-		PFLU_RS22135	0.14	-1.8
4,980,313	-		PFLU_RS22135	0.14	-1.8
4,980,445	-		PFLU_RS22135	0.24	+0.0
4,980,490	-		PFLU_RS22135	0.27	+1.9
4,980,603	+		PFLU_RS22135	0.35	-1.3
4,980,603	+		PFLU_RS22135	0.35	+0.6
4,980,603	+		PFLU_RS22135	0.35	+0.4
4,980,603	+		PFLU_RS22135	0.35	+0.8
4,980,603	+		PFLU_RS22135	0.35	-0.3
4,980,603	+		PFLU_RS22135	0.35	+3.2
4,980,604	-		PFLU_RS22135	0.35	+0.2
4,980,604	-		PFLU_RS22135	0.35	+0.9
4,980,683	+		PFLU_RS22135	0.41	+0.1
4,980,683	+		PFLU_RS22135	0.41	+3.4
4,980,684	-		PFLU_RS22135	0.41	-1.8
4,980,684	-		PFLU_RS22135	0.41	-0.1
4,980,706	-		PFLU_RS22135	0.43	-1.5
4,980,795	+		PFLU_RS22135	0.49	+0.4
4,980,795	+		PFLU_RS22135	0.49	+0.7
4,980,795	+		PFLU_RS22135	0.49	+0.0
4,980,795	+		PFLU_RS22135	0.49	-0.4
4,980,795	+		PFLU_RS22135	0.49	-0.6
4,980,795	+		PFLU_RS22135	0.49	+0.8
4,980,795	+		PFLU_RS22135	0.49	+1.9
4,980,795	+		PFLU_RS22135	0.49	-1.4
4,980,795	+		PFLU_RS22135	0.49	-0.3
4,980,795	+		PFLU_RS22135	0.49	-0.6
4,980,795	+		PFLU_RS22135	0.49	-1.2
4,980,795	+		PFLU_RS22135	0.49	-2.0
4,980,795	+		PFLU_RS22135	0.49	+1.0
4,980,796	-		PFLU_RS22135	0.49	-0.2
4,980,796	-		PFLU_RS22135	0.49	-0.3
4,980,796	-		PFLU_RS22135	0.49	-1.9
4,980,796	-		PFLU_RS22135	0.49	-0.2
4,980,796	-		PFLU_RS22135	0.49	+1.1
4,980,796	-		PFLU_RS22135	0.49	-1.5
4,980,796	-		PFLU_RS22135	0.49	-2.1
4,980,796	-		PFLU_RS22135	0.49	-0.6
4,980,796	-		PFLU_RS22135	0.49	-1.2
4,980,796	-		PFLU_RS22135	0.49	-2.0
4,980,796	-		PFLU_RS22135	0.49	-2.0
4,980,807	+		PFLU_RS22135	0.50	-1.2
4,980,807	+		PFLU_RS22135	0.50	-0.9
4,980,807	+		PFLU_RS22135	0.50	-0.8
4,980,807	+		PFLU_RS22135	0.50	-1.8
4,980,807	+		PFLU_RS22135	0.50	+2.4
4,980,807	+		PFLU_RS22135	0.50	-1.7
4,980,807	+		PFLU_RS22135	0.50	-0.9
4,980,807	+		PFLU_RS22135	0.50	+0.3
4,980,807	+		PFLU_RS22135	0.50	-1.0
4,980,807	+		PFLU_RS22135	0.50	+1.4
4,980,808	-		PFLU_RS22135	0.50	+1.7
4,980,808	-		PFLU_RS22135	0.50	-2.9
4,980,808	-		PFLU_RS22135	0.50	+1.3
4,980,808	-		PFLU_RS22135	0.50	-1.2
4,980,808	-		PFLU_RS22135	0.50	-0.8
4,980,808	-		PFLU_RS22135	0.50	-0.3
4,980,808	-		PFLU_RS22135	0.50	+0.4
4,980,808	-		PFLU_RS22135	0.50	-0.8
4,980,808	-		PFLU_RS22135	0.50	+0.4
4,980,836	+		PFLU_RS22135	0.52	+2.2
4,980,837	-		PFLU_RS22135	0.52	-1.6
4,980,837	-		PFLU_RS22135	0.52	+0.4
4,980,882	+		PFLU_RS22135	0.55	-0.4
4,980,882	+		PFLU_RS22135	0.55	+3.9
4,980,882	+		PFLU_RS22135	0.55	-1.8
4,980,882	+		PFLU_RS22135	0.55	+0.7
4,980,882	+		PFLU_RS22135	0.55	+1.7
4,980,882	+		PFLU_RS22135	0.55	-1.6
4,980,882	+		PFLU_RS22135	0.55	-0.8
4,980,882	+		PFLU_RS22135	0.55	+0.9
4,980,882	+		PFLU_RS22135	0.55	+1.4
4,980,883	-		PFLU_RS22135	0.55	+0.7
4,980,883	-		PFLU_RS22135	0.55	+1.6
4,980,883	-		PFLU_RS22135	0.55	-1.0
4,980,883	-		PFLU_RS22135	0.55	+0.0
4,980,883	-		PFLU_RS22135	0.55	-2.8
4,980,883	-		PFLU_RS22135	0.55	-0.5
4,980,906	+		PFLU_RS22135	0.57	+2.1
4,980,907	-		PFLU_RS22135	0.57	-2.7
4,980,907	-		PFLU_RS22135	0.57	+0.0