Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18980

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
4,292,878	+				-0.6
4,292,878	+				-2.3
4,292,878	+				-1.7
4,292,878	+				-0.1
4,292,879	-				-0.8
4,292,879	-				-1.4
4,292,899	+				-1.8
4,292,899	+				-1.2
4,292,900	-				-2.6
4,292,900	-				-1.5
4,292,900	-				-0.9
4,292,900	-				-3.4
4,292,900	-				-0.7
4,292,900	-				+1.3
4,292,900	-				-1.9
4,292,902	+				-2.7
4,292,902	+				+0.0
4,292,902	+				+1.3
4,292,902	+				-1.4
4,292,902	+				-0.1
4,292,902	+				-2.5
4,292,902	+				-2.4
4,292,902	+				-1.3
4,292,902	+				-0.9
4,292,902	+				-2.7
4,292,902	+				-1.4
4,292,902	+				-0.9
4,292,903	-				-3.1
4,292,903	-				-1.1
4,292,903	-				-2.6
4,293,031	+				-0.8
4,293,031	+				+0.8
4,293,031	+				-1.4
4,293,032	-				-0.7
4,293,032	-				-2.3
4,293,032	-				-0.1
4,293,032	-				+3.3
4,293,032	-				-1.7
4,293,032	-				-1.4
4,293,032	-				-2.8
4,293,032	-				-0.9
4,293,032	-				-1.1
4,293,111	+				-1.5
4,293,111	+				-2.2
4,293,112	-				-1.1
4,293,286	+		PFLU_RS18975	0.29	+2.1
4,293,287	-		PFLU_RS18975	0.29	-1.4
4,293,287	-		PFLU_RS18975	0.29	-0.3
4,293,287	-		PFLU_RS18975	0.29	-0.7
4,293,287	-		PFLU_RS18975	0.29	+1.9
4,293,331	+		PFLU_RS18975	0.35	-1.4
4,293,331	+		PFLU_RS18975	0.35	-1.8
4,293,331	+		PFLU_RS18975	0.35	-1.4
4,293,331	+		PFLU_RS18975	0.35	+2.3
4,293,331	+		PFLU_RS18975	0.35	-1.1
4,293,331	+		PFLU_RS18975	0.35	+1.2
4,293,331	+		PFLU_RS18975	0.35	-0.4
4,293,331	+		PFLU_RS18975	0.35	-1.8
4,293,331	+		PFLU_RS18975	0.35	-2.4
4,293,331	+		PFLU_RS18975	0.35	-1.3
4,293,331	+		PFLU_RS18975	0.35	-1.7
4,293,331	+		PFLU_RS18975	0.35	+2.6
4,293,332	-		PFLU_RS18975	0.35	-2.9
4,293,332	-		PFLU_RS18975	0.35	-0.1
4,293,332	-		PFLU_RS18975	0.35	-0.9
4,293,332	-		PFLU_RS18975	0.35	-2.2
4,293,332	-		PFLU_RS18975	0.35	-3.0
4,293,332	-		PFLU_RS18975	0.35	-2.3
4,293,332	-		PFLU_RS18975	0.35	-0.7
4,293,332	-		PFLU_RS18975	0.35	-2.1
4,293,332	-		PFLU_RS18975	0.35	-2.3
4,293,332	-		PFLU_RS18975	0.35	-1.0
4,293,332	-		PFLU_RS18975	0.35	-2.7
4,293,332	-		PFLU_RS18975	0.35	-1.9
4,293,332	-		PFLU_RS18975	0.35	-3.4
4,293,332	-		PFLU_RS18975	0.35	-0.6
4,293,332	-		PFLU_RS18975	0.35	-2.3
4,293,368	+		PFLU_RS18975	0.40	-1.3
4,293,369	-		PFLU_RS18975	0.40	+0.9
4,293,385	+		PFLU_RS18975	0.42	+0.3
4,293,385	+		PFLU_RS18975	0.42	+0.4
4,293,386	-		PFLU_RS18975	0.42	-2.2
4,293,386	-		PFLU_RS18975	0.42	-0.2
4,293,386	-		PFLU_RS18975	0.42	-2.3
4,293,386	-		PFLU_RS18975	0.42	-2.2
4,293,464	+		PFLU_RS18975	0.51	-0.1
4,293,464	+		PFLU_RS18975	0.51	-2.7
4,293,464	+		PFLU_RS18975	0.51	+0.7
4,293,464	+		PFLU_RS18975	0.51	-0.1
4,293,465	-		PFLU_RS18975	0.52	+0.3
4,293,465	-		PFLU_RS18975	0.52	-2.3
4,293,465	-		PFLU_RS18975	0.52	+0.1
4,293,465	-		PFLU_RS18975	0.52	-1.6
4,293,465	-		PFLU_RS18975	0.52	-0.2
4,293,465	-		PFLU_RS18975	0.52	-1.7
4,293,465	-		PFLU_RS18975	0.52	-0.0
4,293,465	-		PFLU_RS18975	0.52	-0.6
4,293,465	-		PFLU_RS18975	0.52	-2.1
4,293,584	+		PFLU_RS18975	0.66	+2.1
4,293,584	+		PFLU_RS18975	0.66	+0.3
4,293,584	+		PFLU_RS18975	0.66	+3.4
4,293,584	+		PFLU_RS18975	0.66	-0.7
4,293,584	+		PFLU_RS18975	0.66	-0.5
4,293,584	+		PFLU_RS18975	0.66	-1.7
4,293,584	+		PFLU_RS18975	0.66	-1.0
4,293,584	+		PFLU_RS18975	0.66	-2.1
4,293,584	+		PFLU_RS18975	0.66	+1.9
4,293,584	+		PFLU_RS18975	0.66	+0.3
4,293,584	+		PFLU_RS18975	0.66	-0.7
4,293,585	-		PFLU_RS18975	0.66	-0.8
4,293,585	-		PFLU_RS18975	0.66	-0.7
4,293,585	-		PFLU_RS18975	0.66	-2.7
4,293,585	-		PFLU_RS18975	0.66	-1.6
4,293,585	-		PFLU_RS18975	0.66	-1.1
4,293,585	-		PFLU_RS18975	0.66	-3.3
4,293,604	+		PFLU_RS18975	0.69	-0.4
4,293,604	+		PFLU_RS18975	0.69	-0.1
4,293,605	-		PFLU_RS18975	0.69	-1.8
4,293,743	-		PFLU_RS18975	0.86	-2.0
4,294,035	+				-0.1
4,294,035	+				-0.4
4,294,035	+				-0.9
4,294,035	+				+0.5
4,294,035	+				-0.7
4,294,036	-				-1.4
4,294,036	-				-3.0
4,294,036	-				-2.9
4,294,036	-				-2.8
4,294,036	-				-2.6
4,294,036	-				-1.6
4,294,036	-				-2.6
4,294,036	-				-2.4
4,294,334	+		PFLU_RS18980	0.25	-0.4
4,294,335	-		PFLU_RS18980	0.25	-1.6
4,294,335	-		PFLU_RS18980	0.25	-2.9
4,294,335	-		PFLU_RS18980	0.25	-0.4
4,294,461	+		PFLU_RS18980	0.32	+2.2
4,294,524	+		PFLU_RS18980	0.35	+2.0
4,294,524	+		PFLU_RS18980	0.35	+1.9
4,294,525	-		PFLU_RS18980	0.35	-1.3
4,294,659	+		PFLU_RS18980	0.42	-2.8
4,294,659	+		PFLU_RS18980	0.42	-0.0
4,294,875	+		PFLU_RS18980	0.53	-0.7
4,294,875	+		PFLU_RS18980	0.53	-2.7
4,294,875	+		PFLU_RS18980	0.53	-0.7
4,294,875	+		PFLU_RS18980	0.53	-2.0
4,294,875	+		PFLU_RS18980	0.53	-2.5
4,294,875	+		PFLU_RS18980	0.53	-1.4
4,294,875	+		PFLU_RS18980	0.53	+1.3
4,294,875	+		PFLU_RS18980	0.53	-1.3
4,294,876	-		PFLU_RS18980	0.53	+1.3
4,294,876	-		PFLU_RS18980	0.53	+1.9
4,294,876	-		PFLU_RS18980	0.53	-1.7
4,294,876	-		PFLU_RS18980	0.53	+0.3
4,294,876	-		PFLU_RS18980	0.53	-0.1
4,295,004	+		PFLU_RS18980	0.60	+1.1
4,295,004	+		PFLU_RS18980	0.60	-0.5
4,295,004	+		PFLU_RS18980	0.60	-2.1
4,295,004	+		PFLU_RS18980	0.60	-2.1
4,295,004	+		PFLU_RS18980	0.60	+0.8
4,295,004	+		PFLU_RS18980	0.60	-0.8
4,295,004	+		PFLU_RS18980	0.60	-1.6
4,295,004	+		PFLU_RS18980	0.60	-1.6
4,295,005	-		PFLU_RS18980	0.60	-2.6
4,295,005	-		PFLU_RS18980	0.60	-2.1
4,295,005	-		PFLU_RS18980	0.60	-1.1
4,295,125	+		PFLU_RS18980	0.66	+0.0
4,295,126	-		PFLU_RS18980	0.66	+0.9
4,295,126	-		PFLU_RS18980	0.66	+7.6
4,295,180	+		PFLU_RS18980	0.69	-1.7
4,295,181	-		PFLU_RS18980	0.69	-2.6
4,295,190	+		PFLU_RS18980	0.69	+0.0
4,295,191	-		PFLU_RS18980	0.70	+1.5
4,295,259	+		PFLU_RS18980	0.73	-0.1
4,295,259	+		PFLU_RS18980	0.73	-3.1
4,295,259	+		PFLU_RS18980	0.73	-2.0
4,295,259	+		PFLU_RS18980	0.73	+1.9
4,295,259	+		PFLU_RS18980	0.73	+0.1
4,295,260	-		PFLU_RS18980	0.73	+1.2
4,295,260	-		PFLU_RS18980	0.73	-2.0
4,295,260	-		PFLU_RS18980	0.73	+0.3
4,295,260	-		PFLU_RS18980	0.73	+1.9
4,295,260	-		PFLU_RS18980	0.73	+0.9
4,295,260	-		PFLU_RS18980	0.73	-0.3
4,295,260	-		PFLU_RS18980	0.73	-1.0
4,295,260	-		PFLU_RS18980	0.73	+0.1
4,295,260	-		PFLU_RS18980	0.73	+1.6
4,295,300	+		PFLU_RS18980	0.75	-0.3
4,295,401	+		PFLU_RS18980	0.80	-1.3
4,295,402	-		PFLU_RS18980	0.80	-2.1
4,295,402	-		PFLU_RS18980	0.80	-0.9
4,295,478	+		PFLU_RS18980	0.84	-0.1
4,295,478	+		PFLU_RS18980	0.84	-1.4
4,295,478	+		PFLU_RS18980	0.84	-2.5
4,295,478	+		PFLU_RS18980	0.84	-2.0
4,295,478	+		PFLU_RS18980	0.84	-1.9
4,295,478	+		PFLU_RS18980	0.84	-2.0
4,295,478	+		PFLU_RS18980	0.84	-0.9
4,295,478	+		PFLU_RS18980	0.84	+0.9
4,295,478	+		PFLU_RS18980	0.84	-0.4
4,295,478	+		PFLU_RS18980	0.84	-1.1
4,295,478	+		PFLU_RS18980	0.84	+1.6
4,295,478	+		PFLU_RS18980	0.84	-0.1
4,295,479	-		PFLU_RS18980	0.84	-1.7
4,295,479	-		PFLU_RS18980	0.84	-0.4
4,295,479	-		PFLU_RS18980	0.84	-0.4
4,295,479	-		PFLU_RS18980	0.84	-0.3
4,295,479	-		PFLU_RS18980	0.84	-3.3
4,295,479	-		PFLU_RS18980	0.84	-0.7
4,295,479	-		PFLU_RS18980	0.84	-1.9
4,295,479	-		PFLU_RS18980	0.84	+1.4
4,295,479	-		PFLU_RS18980	0.84	-0.7
4,295,479	-		PFLU_RS18980	0.84	-0.4
4,295,479	-		PFLU_RS18980	0.84	+0.6
4,295,479	-		PFLU_RS18980	0.84	-1.8
4,295,479	-		PFLU_RS18980	0.84	-1.4
4,295,479	-		PFLU_RS18980	0.84	-2.1
4,295,479	-		PFLU_RS18980	0.84	-2.0
4,295,675	+				+2.0
4,295,675	+				-0.7
4,295,775	+				+2.1
4,295,775	+				-2.6
4,295,775	+				-0.7
4,295,776	-				+1.9
4,295,776	-				-0.1
4,295,868	+		PFLU_RS18985	0.15	-1.8
4,295,906	-		PFLU_RS18985	0.21	+2.6
4,295,906	-		PFLU_RS18985	0.21	+0.5
4,296,069	+		PFLU_RS18985	0.47	+1.9
4,296,069	+		PFLU_RS18985	0.47	+0.3
4,296,070	-		PFLU_RS18985	0.47	+1.6
4,296,070	-		PFLU_RS18985	0.47	-0.1
4,296,162	+		PFLU_RS18985	0.61	+0.3
4,296,162	+		PFLU_RS18985	0.61	-2.8
4,296,162	+		PFLU_RS18985	0.61	+0.3
4,296,163	-		PFLU_RS18985	0.61	+2.1
4,296,163	-		PFLU_RS18985	0.61	+0.9
4,296,171	+		PFLU_RS18985	0.63	-0.1
4,296,171	+		PFLU_RS18985	0.63	+1.8
4,296,171	+		PFLU_RS18985	0.63	-0.7
4,296,172	-		PFLU_RS18985	0.63	-1.1
4,296,172	-		PFLU_RS18985	0.63	-0.2
4,296,172	-		PFLU_RS18985	0.63	-1.1
4,296,231	+		PFLU_RS18985	0.72	+0.4
4,296,401	-				+1.9
4,296,418	+				+1.2
4,296,418	+				+2.4
4,296,418	+				-0.9
4,296,418	+				+0.1
4,296,418	+				-0.4
4,296,418	+				-0.4
4,296,419	-				+0.1
4,296,419	-				+0.2
4,296,419	-				+2.6
4,296,419	-				+0.1
4,296,419	-				-1.1
4,296,419	-				-2.2
4,296,443	-				-1.3
4,296,443	-				-0.8
4,296,443	-				+0.4
4,296,453	+				-2.5
4,296,453	+				+2.9
4,296,453	+				-1.7
4,296,453	+				-0.1
4,296,453	+				-0.1
4,296,453	+				-1.2
4,296,453	+				-1.4
4,296,453	+				+2.2
4,296,454	-				+2.1
4,296,454	-				+0.9
4,296,454	-				+0.7
4,296,454	-				+1.2
4,296,454	-				-3.1
4,296,454	-				+1.6
4,296,454	-				-2.5
4,296,454	-				-1.9
4,296,454	-				+0.3
4,296,454	-				-1.2
4,296,454	-				-2.0
4,296,456	+				+2.8
4,296,457	-				-0.4
4,296,463	+				+3.2
4,296,464	-				+1.4
4,296,473	+				-0.9
4,296,473	+				+2.4
4,296,473	+				+0.3
4,296,473	+				+1.9
4,296,473	+				-2.6
4,296,473	+				-0.9
4,296,473	+				-1.8
4,296,473	+				-1.1
4,296,473	+				-0.9
4,296,474	-				-0.9
4,296,474	-				-0.7
4,296,474	-				-1.9
4,296,474	-				-0.5
4,296,474	-				-0.5
4,296,474	-				-2.2
4,296,477	+				+0.8
4,296,477	+				+1.2
4,296,477	+				+2.9
4,296,477	+				+1.3
4,296,478	-				+0.5
4,296,478	-				+3.5
4,296,478	-				-0.9
4,296,478	-				+0.8
4,296,478	-				-0.7
4,296,478	-				-1.2
4,296,478	-				+0.9
4,296,478	-				-3.0
4,296,478	-				+0.4
4,296,478	-				-1.5
4,296,483	-				-0.7
4,296,483	-				+1.2
4,296,486	+				-0.1
4,296,486	+				+1.9
4,296,486	+				+5.0
4,296,486	+				+0.9
4,296,486	+				-1.2
4,296,486	+				+0.8
4,296,486	+				-2.2
4,296,486	+				-0.4
4,296,486	+				-1.2
4,296,486	+				-0.9
4,296,486	+				+0.5
4,296,486	+				-1.5
4,296,486	+				+2.9
4,296,486	+				-2.1
4,296,486	+				-0.1
4,296,486	+				-1.5
4,296,486	+				-1.9
4,296,486	+				+1.4
4,296,486	+				+2.6
4,296,486	+				-0.5
4,296,486	+				+0.3
4,296,486	+				+0.5
4,296,486	+				+0.3
4,296,486	+				+1.4
4,296,486	+				+2.1
4,296,486	+				+1.2
4,296,486	+				+0.1
4,296,486	+				-1.7
4,296,487	-				+1.8
4,296,487	-				-0.1
4,296,487	-				+1.7
4,296,487	-				-0.4
4,296,487	-				-1.2
4,296,487	-				+1.8
4,296,487	-				-0.4
4,296,487	-				-1.4
4,296,487	-				-0.4
4,296,487	-				-0.4
4,296,487	-				+0.2
4,296,487	-				-2.0
4,296,487	-				+2.8
4,296,487	-				-0.9
4,296,487	-				+2.0
4,296,487	-				-1.4
4,296,487	-				+0.9
4,296,487	-				+0.6
4,296,487	-				-0.8
4,296,487	-				-0.7
4,296,487	-				+0.7
4,296,487	-				-0.5
4,296,487	-				-1.9
4,296,487	-				+1.2
4,296,487	-				-1.2
4,296,487	-				+0.4
4,296,487	-				-0.1
4,296,487	-				+2.3
4,296,487	-				-0.1
4,296,487	-				-1.7
4,296,487	-				+0.4
4,296,487	-				-0.8
4,296,487	-				+0.9
4,296,487	-				+1.1
4,296,489	+				+0.7
4,296,489	+				+1.3
4,296,489	+				+1.2
4,296,489	+				+0.3
4,296,489	+				+2.1
4,296,489	+				-3.1
4,296,490	-				-2.2
4,296,490	-				+0.9
4,296,490	-				-0.1
4,296,490	-				-1.5
4,296,490	-				+1.7
4,296,501	+				-1.5
4,296,501	+				+1.6
4,296,501	+				-0.1
4,296,501	+				+2.5
4,296,502	-				-1.9
4,296,526	+				+2.2
4,296,647	+		PFLU_RS18990	0.31	-0.7
4,296,647	+		PFLU_RS18990	0.31	-0.9
4,296,647	+		PFLU_RS18990	0.31	+1.0
4,296,647	+		PFLU_RS18990	0.31	+3.1
4,296,647	+		PFLU_RS18990	0.31	-1.2
4,296,647	+		PFLU_RS18990	0.31	-2.0
4,296,648	-		PFLU_RS18990	0.32	+1.9
4,296,648	-		PFLU_RS18990	0.32	+2.1
4,296,648	-		PFLU_RS18990	0.32	-1.9
4,296,648	-		PFLU_RS18990	0.32	-0.7
4,296,648	-		PFLU_RS18990	0.32	-0.1
4,296,676	+		PFLU_RS18990	0.40	+1.2
4,296,676	+		PFLU_RS18990	0.40	+4.0
4,296,677	-		PFLU_RS18990	0.40	-0.9
4,296,677	-		PFLU_RS18990	0.40	+1.3
4,296,718	+		PFLU_RS18990	0.52	-0.7
4,296,718	+		PFLU_RS18990	0.52	+0.7
4,296,719	-		PFLU_RS18990	0.52	+2.2
4,296,719	-		PFLU_RS18990	0.52	-1.2
4,296,759	+		PFLU_RS18990	0.63	+0.9
4,296,759	+		PFLU_RS18990	0.63	+1.5