Experiment: 4-Aminobutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18850 and PFLU_RS18855 overlap by 4 nucleotides PFLU_RS18855 and PFLU_RS18860 overlap by 4 nucleotides PFLU_RS18860 and PFLU_RS18865 overlap by 4 nucleotides PFLU_RS18865 and PFLU_RS18870 are separated by 24 nucleotides
PFLU_RS18850: PFLU_RS18850 - monovalent cation/H+ antiporter subunit D, at 4,261,864 to 4,263,546
_RS18850
PFLU_RS18855: PFLU_RS18855 - Na+/H+ antiporter subunit E, at 4,263,543 to 4,264,031
_RS18855
PFLU_RS18860: PFLU_RS18860 - K+/H+ antiporter subunit F, at 4,264,028 to 4,264,306
_RS18860
PFLU_RS18865: PFLU_RS18865 - Na+/H+ antiporter subunit G, at 4,264,303 to 4,264,641
_RS18865
PFLU_RS18870: PFLU_RS18870 - hypothetical protein, at 4,264,666 to 4,265,232
_RS18870
Position (kb) 4264
4265 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4263.352 kb on + strand, within PFLU_RS18850 at 4263.427 kb on + strand at 4263.428 kb on - strand at 4263.469 kb on + strand at 4263.469 kb on + strand at 4263.469 kb on + strand at 4263.469 kb on + strand at 4263.470 kb on - strand at 4263.929 kb on + strand, within PFLU_RS18855 at 4263.999 kb on + strand at 4263.999 kb on + strand at 4263.999 kb on + strand at 4263.999 kb on + strand at 4264.000 kb on - strand at 4264.000 kb on - strand at 4264.000 kb on - strand at 4264.000 kb on - strand at 4264.151 kb on + strand, within PFLU_RS18860 at 4264.151 kb on + strand, within PFLU_RS18860 at 4264.151 kb on + strand, within PFLU_RS18860 at 4264.151 kb on + strand, within PFLU_RS18860 at 4264.152 kb on - strand, within PFLU_RS18860 at 4264.152 kb on - strand, within PFLU_RS18860 at 4264.152 kb on - strand, within PFLU_RS18860 at 4264.152 kb on - strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.157 kb on + strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.158 kb on - strand, within PFLU_RS18860 at 4264.214 kb on + strand, within PFLU_RS18860 at 4264.214 kb on + strand, within PFLU_RS18860 at 4264.214 kb on + strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.215 kb on - strand, within PFLU_RS18860 at 4264.385 kb on + strand, within PFLU_RS18865 at 4264.385 kb on + strand, within PFLU_RS18865 at 4264.386 kb on - strand, within PFLU_RS18865 at 4264.473 kb on + strand, within PFLU_RS18865 at 4264.473 kb on + strand, within PFLU_RS18865 at 4264.474 kb on - strand, within PFLU_RS18865 at 4264.477 kb on + strand, within PFLU_RS18865 at 4264.477 kb on + strand, within PFLU_RS18865 at 4264.477 kb on + strand, within PFLU_RS18865 at 4264.478 kb on - strand, within PFLU_RS18865 at 4264.532 kb on + strand, within PFLU_RS18865 at 4264.533 kb on - strand, within PFLU_RS18865 at 4264.643 kb on + strand at 4264.643 kb on + strand at 4264.643 kb on + strand at 4264.643 kb on + strand at 4264.643 kb on + strand at 4264.644 kb on - strand at 4264.644 kb on - strand at 4264.644 kb on - strand at 4264.644 kb on - strand at 4264.644 kb on - strand at 4264.719 kb on + strand at 4264.719 kb on + strand at 4264.719 kb on + strand at 4264.719 kb on + strand at 4264.719 kb on + strand at 4264.720 kb on - strand at 4264.720 kb on - strand at 4264.721 kb on + strand at 4264.722 kb on - strand at 4264.722 kb on - strand at 4265.002 kb on + strand, within PFLU_RS18870 at 4265.003 kb on - strand, within PFLU_RS18870 at 4265.003 kb on - strand, within PFLU_RS18870 at 4265.003 kb on - strand, within PFLU_RS18870 at 4265.003 kb on - strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.042 kb on + strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.043 kb on - strand, within PFLU_RS18870 at 4265.044 kb on + strand, within PFLU_RS18870 at 4265.044 kb on + strand, within PFLU_RS18870 at 4265.044 kb on + strand, within PFLU_RS18870 at 4265.044 kb on + strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.045 kb on - strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.057 kb on + strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.058 kb on - strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.077 kb on + strand, within PFLU_RS18870 at 4265.078 kb on - strand, within PFLU_RS18870 at 4265.078 kb on - strand, within PFLU_RS18870 at 4265.078 kb on - strand, within PFLU_RS18870 at 4265.078 kb on - strand, within PFLU_RS18870 at 4265.078 kb on - strand, within PFLU_RS18870 at 4265.082 kb on + strand, within PFLU_RS18870 at 4265.082 kb on + strand, within PFLU_RS18870 at 4265.188 kb on + strand at 4265.188 kb on + strand at 4265.188 kb on + strand at 4265.188 kb on + strand at 4265.188 kb on + strand at 4265.189 kb on - strand at 4265.189 kb on - strand at 4265.203 kb on + strand at 4265.203 kb on + strand at 4265.204 kb on - strand at 4265.204 kb on - strand at 4265.270 kb on - strand at 4265.270 kb on - strand at 4265.387 kb on + strand at 4265.387 kb on + strand at 4265.387 kb on + strand at 4265.388 kb on - strand at 4265.388 kb on - strand at 4265.388 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand at 4265.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Aminobutyric (C) remove 4,263,352 + PFLU_RS18850 0.88 -1.9 4,263,427 + +0.7 4,263,428 - -2.0 4,263,469 + +1.8 4,263,469 + +3.2 4,263,469 + +0.4 4,263,469 + -2.2 4,263,470 - -2.5 4,263,929 + PFLU_RS18855 0.79 -0.8 4,263,999 + -1.1 4,263,999 + -1.6 4,263,999 + +3.0 4,263,999 + +1.9 4,264,000 - -1.1 4,264,000 - +0.9 4,264,000 - -0.3 4,264,000 - +1.9 4,264,151 + PFLU_RS18860 0.44 -0.9 4,264,151 + PFLU_RS18860 0.44 -2.0 4,264,151 + PFLU_RS18860 0.44 -2.7 4,264,151 + PFLU_RS18860 0.44 +1.9 4,264,152 - PFLU_RS18860 0.44 -0.0 4,264,152 - PFLU_RS18860 0.44 -1.7 4,264,152 - PFLU_RS18860 0.44 -0.7 4,264,152 - PFLU_RS18860 0.44 -1.1 4,264,157 + PFLU_RS18860 0.46 -0.7 4,264,157 + PFLU_RS18860 0.46 +0.3 4,264,157 + PFLU_RS18860 0.46 +1.6 4,264,157 + PFLU_RS18860 0.46 +2.1 4,264,157 + PFLU_RS18860 0.46 +0.9 4,264,157 + PFLU_RS18860 0.46 -1.3 4,264,157 + PFLU_RS18860 0.46 +0.0 4,264,157 + PFLU_RS18860 0.46 +1.3 4,264,157 + PFLU_RS18860 0.46 +2.2 4,264,157 + PFLU_RS18860 0.46 +0.2 4,264,157 + PFLU_RS18860 0.46 -0.7 4,264,157 + PFLU_RS18860 0.46 -2.4 4,264,158 - PFLU_RS18860 0.47 +1.6 4,264,158 - PFLU_RS18860 0.47 +1.5 4,264,158 - PFLU_RS18860 0.47 +2.5 4,264,158 - PFLU_RS18860 0.47 +0.6 4,264,158 - PFLU_RS18860 0.47 -2.6 4,264,158 - PFLU_RS18860 0.47 +0.7 4,264,158 - PFLU_RS18860 0.47 +2.4 4,264,158 - PFLU_RS18860 0.47 -0.8 4,264,158 - PFLU_RS18860 0.47 +3.5 4,264,214 + PFLU_RS18860 0.67 +1.5 4,264,214 + PFLU_RS18860 0.67 +1.3 4,264,214 + PFLU_RS18860 0.67 +1.9 4,264,215 - PFLU_RS18860 0.67 -1.1 4,264,215 - PFLU_RS18860 0.67 +1.8 4,264,215 - PFLU_RS18860 0.67 -1.7 4,264,215 - PFLU_RS18860 0.67 +1.4 4,264,215 - PFLU_RS18860 0.67 -0.6 4,264,215 - PFLU_RS18860 0.67 +0.6 4,264,215 - PFLU_RS18860 0.67 -0.0 4,264,385 + PFLU_RS18865 0.24 -1.6 4,264,385 + PFLU_RS18865 0.24 +0.9 4,264,386 - PFLU_RS18865 0.24 +0.9 4,264,473 + PFLU_RS18865 0.50 +0.5 4,264,473 + PFLU_RS18865 0.50 -1.3 4,264,474 - PFLU_RS18865 0.50 +1.6 4,264,477 + PFLU_RS18865 0.51 -2.1 4,264,477 + PFLU_RS18865 0.51 -1.3 4,264,477 + PFLU_RS18865 0.51 -1.1 4,264,478 - PFLU_RS18865 0.52 -0.1 4,264,532 + PFLU_RS18865 0.68 -1.8 4,264,533 - PFLU_RS18865 0.68 -1.8 4,264,643 + -0.9 4,264,643 + +2.0 4,264,643 + -1.7 4,264,643 + +1.1 4,264,643 + +1.0 4,264,644 - +2.0 4,264,644 - -0.4 4,264,644 - -0.7 4,264,644 - -0.1 4,264,644 - +1.9 4,264,719 + -1.3 4,264,719 + +1.1 4,264,719 + -1.0 4,264,719 + -1.8 4,264,719 + +0.3 4,264,720 - -0.1 4,264,720 - +2.4 4,264,721 + +0.1 4,264,722 - +0.1 4,264,722 - -0.1 4,265,002 + PFLU_RS18870 0.59 -1.1 4,265,003 - PFLU_RS18870 0.59 +1.4 4,265,003 - PFLU_RS18870 0.59 +0.9 4,265,003 - PFLU_RS18870 0.59 +2.7 4,265,003 - PFLU_RS18870 0.59 +1.2 4,265,042 + PFLU_RS18870 0.66 +0.7 4,265,042 + PFLU_RS18870 0.66 +0.6 4,265,042 + PFLU_RS18870 0.66 -2.1 4,265,042 + PFLU_RS18870 0.66 -0.2 4,265,042 + PFLU_RS18870 0.66 -0.9 4,265,042 + PFLU_RS18870 0.66 -1.3 4,265,042 + PFLU_RS18870 0.66 -2.2 4,265,042 + PFLU_RS18870 0.66 -0.1 4,265,042 + PFLU_RS18870 0.66 -1.4 4,265,042 + PFLU_RS18870 0.66 -0.1 4,265,042 + PFLU_RS18870 0.66 -0.2 4,265,042 + PFLU_RS18870 0.66 -0.4 4,265,042 + PFLU_RS18870 0.66 +1.9 4,265,042 + PFLU_RS18870 0.66 +0.6 4,265,042 + PFLU_RS18870 0.66 -0.6 4,265,042 + PFLU_RS18870 0.66 -0.4 4,265,042 + PFLU_RS18870 0.66 +0.2 4,265,042 + PFLU_RS18870 0.66 -0.3 4,265,043 - PFLU_RS18870 0.66 +1.1 4,265,043 - PFLU_RS18870 0.66 +1.6 4,265,043 - PFLU_RS18870 0.66 -2.6 4,265,043 - PFLU_RS18870 0.66 +0.6 4,265,043 - PFLU_RS18870 0.66 +1.9 4,265,043 - PFLU_RS18870 0.66 +2.5 4,265,043 - PFLU_RS18870 0.66 -2.0 4,265,043 - PFLU_RS18870 0.66 -0.2 4,265,043 - PFLU_RS18870 0.66 -2.2 4,265,043 - PFLU_RS18870 0.66 -2.4 4,265,043 - PFLU_RS18870 0.66 -0.6 4,265,043 - PFLU_RS18870 0.66 -0.1 4,265,043 - PFLU_RS18870 0.66 +0.9 4,265,043 - PFLU_RS18870 0.66 -0.9 4,265,043 - PFLU_RS18870 0.66 -2.2 4,265,043 - PFLU_RS18870 0.66 -1.1 4,265,043 - PFLU_RS18870 0.66 -1.1 4,265,043 - PFLU_RS18870 0.66 +0.4 4,265,043 - PFLU_RS18870 0.66 -0.4 4,265,044 + PFLU_RS18870 0.67 -2.9 4,265,044 + PFLU_RS18870 0.67 +2.6 4,265,044 + PFLU_RS18870 0.67 +1.6 4,265,044 + PFLU_RS18870 0.67 -2.1 4,265,045 - PFLU_RS18870 0.67 -2.1 4,265,045 - PFLU_RS18870 0.67 -0.3 4,265,045 - PFLU_RS18870 0.67 +1.2 4,265,045 - PFLU_RS18870 0.67 +0.6 4,265,045 - PFLU_RS18870 0.67 -2.1 4,265,045 - PFLU_RS18870 0.67 -0.1 4,265,057 + PFLU_RS18870 0.69 -0.5 4,265,057 + PFLU_RS18870 0.69 -2.0 4,265,057 + PFLU_RS18870 0.69 +1.5 4,265,057 + PFLU_RS18870 0.69 +2.8 4,265,057 + PFLU_RS18870 0.69 -2.4 4,265,057 + PFLU_RS18870 0.69 -1.6 4,265,057 + PFLU_RS18870 0.69 -0.4 4,265,058 - PFLU_RS18870 0.69 -0.7 4,265,058 - PFLU_RS18870 0.69 +0.4 4,265,058 - PFLU_RS18870 0.69 +2.6 4,265,058 - PFLU_RS18870 0.69 -1.7 4,265,058 - PFLU_RS18870 0.69 +0.5 4,265,058 - PFLU_RS18870 0.69 -1.1 4,265,058 - PFLU_RS18870 0.69 -0.4 4,265,058 - PFLU_RS18870 0.69 -0.9 4,265,077 + PFLU_RS18870 0.72 -1.7 4,265,077 + PFLU_RS18870 0.72 +1.9 4,265,077 + PFLU_RS18870 0.72 +1.0 4,265,077 + PFLU_RS18870 0.72 +1.6 4,265,077 + PFLU_RS18870 0.72 +0.7 4,265,077 + PFLU_RS18870 0.72 +2.7 4,265,077 + PFLU_RS18870 0.72 +0.3 4,265,078 - PFLU_RS18870 0.73 +1.3 4,265,078 - PFLU_RS18870 0.73 -1.3 4,265,078 - PFLU_RS18870 0.73 +1.0 4,265,078 - PFLU_RS18870 0.73 -2.2 4,265,078 - PFLU_RS18870 0.73 -0.7 4,265,082 + PFLU_RS18870 0.73 -2.5 4,265,082 + PFLU_RS18870 0.73 -0.3 4,265,188 + +2.1 4,265,188 + -0.1 4,265,188 + -0.1 4,265,188 + -2.0 4,265,188 + +0.9 4,265,189 - -1.1 4,265,189 - +1.1 4,265,203 + -0.1 4,265,203 + -1.8 4,265,204 - -1.6 4,265,204 - +2.6 4,265,270 - -0.9 4,265,270 - -1.6 4,265,387 + -0.1 4,265,387 + +1.6 4,265,387 + +1.7 4,265,388 - +3.0 4,265,388 - -1.9 4,265,388 - -0.7 4,265,470 - -1.6 4,265,470 - +0.0 4,265,470 - -3.2 4,265,470 - -0.6 4,265,470 - -0.4 4,265,470 - -0.0 4,265,470 - +0.8 4,265,470 - +0.9 4,265,470 - +3.0 4,265,470 - -1.9 4,265,470 - -2.5 4,265,470 - -3.3
Or see this region's nucleotide sequence