Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16465

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
3,734,435	-				-0.9
3,734,435	-				+0.9
3,734,435	-				+2.6
3,734,435	-				+0.1
3,734,435	-				-1.6
3,734,507	+				+0.1
3,734,507	+				-2.2
3,734,508	-				+2.5
3,734,508	-				-1.8
3,734,508	-				-2.3
3,734,699	-		PFLU_RS16460	0.17	-0.6
3,734,724	+		PFLU_RS16460	0.20	-2.5
3,734,724	+		PFLU_RS16460	0.20	-2.4
3,734,724	+		PFLU_RS16460	0.20	+0.1
3,734,724	+		PFLU_RS16460	0.20	-0.8
3,734,724	+		PFLU_RS16460	0.20	-1.9
3,734,724	+		PFLU_RS16460	0.20	-1.3
3,734,724	+		PFLU_RS16460	0.20	-1.5
3,734,725	-		PFLU_RS16460	0.20	+0.6
3,734,725	-		PFLU_RS16460	0.20	+1.0
3,734,725	-		PFLU_RS16460	0.20	+0.7
3,734,751	+		PFLU_RS16460	0.24	+2.2
3,734,752	-		PFLU_RS16460	0.24	-0.3
3,734,988	-		PFLU_RS16460	0.55	+1.6
3,734,988	-		PFLU_RS16460	0.55	-2.4
3,735,101	+		PFLU_RS16460	0.70	-1.5
3,735,101	+		PFLU_RS16460	0.70	+1.7
3,735,102	-		PFLU_RS16460	0.70	+2.0
3,735,311	+				+1.4
3,735,311	+				+1.7
3,735,312	-				-1.5
3,735,325	+				-1.4
3,735,325	+				-1.1
3,735,325	+				+2.7
3,735,325	+				-0.2
3,735,325	+				-0.6
3,735,326	-				+0.2
3,735,326	-				-2.8
3,735,326	-				-1.9
3,735,326	-				+1.0
3,735,326	-				+1.0
3,735,326	-				-1.5
3,735,329	+				+0.0
3,735,329	+				+0.9
3,735,329	+				-2.6
3,735,329	+				-0.3
3,735,330	-				-0.6
3,735,330	-				+0.8
3,735,330	-				+2.3
3,735,330	-				+0.5
3,735,330	-				+1.1
3,735,347	+				+0.1
3,735,347	+				+2.6
3,735,348	-				+1.0
3,735,348	-				-1.9
3,735,348	-				-1.8
3,735,393	+				-1.6
3,735,393	+				-1.1
3,735,393	+				+0.4
3,735,393	+				-0.6
3,735,393	+				-0.5
3,735,394	-				-1.5
3,735,394	-				-1.5
3,735,394	-				+0.2
3,735,547	+				+0.7
3,735,547	+				-0.3
3,735,547	+				+4.9
3,735,547	+				-2.6
3,735,547	+				+0.7
3,735,547	+				+0.7
3,735,547	+				-0.9
3,735,547	+				+1.2
3,735,547	+				-1.1
3,735,547	+				+1.8
3,735,547	+				+0.7
3,735,547	+				+0.2
3,735,547	+				+2.7
3,735,548	-				+2.1
3,735,548	-				+0.7
3,735,548	-				-0.3
3,735,548	-				-0.8
3,735,548	-				+1.0
3,735,548	-				-1.1
3,735,548	-				-0.3
3,735,548	-				+0.4
3,735,649	+		PFLU_RS16465	0.15	-1.6
3,735,650	-		PFLU_RS16465	0.15	+0.0
3,735,650	-		PFLU_RS16465	0.15	-2.0
3,735,697	+		PFLU_RS16465	0.18	-2.2
3,735,697	+		PFLU_RS16465	0.18	-1.2
3,735,697	+		PFLU_RS16465	0.18	-0.6
3,735,698	-		PFLU_RS16465	0.18	+0.5
3,735,722	+		PFLU_RS16465	0.20	-2.4
3,735,827	+		PFLU_RS16465	0.27	+1.2
3,735,827	+		PFLU_RS16465	0.27	-1.8
3,735,827	+		PFLU_RS16465	0.27	+1.5
3,735,827	+		PFLU_RS16465	0.27	+0.3
3,735,827	+		PFLU_RS16465	0.27	+1.7
3,735,828	-		PFLU_RS16465	0.28	-0.5
3,735,828	-		PFLU_RS16465	0.28	-0.6
3,735,828	-		PFLU_RS16465	0.28	+2.2
3,735,828	-		PFLU_RS16465	0.28	+1.4
3,735,828	-		PFLU_RS16465	0.28	+2.1
3,735,828	-		PFLU_RS16465	0.28	-1.5
3,736,099	+		PFLU_RS16465	0.46	+1.7
3,736,099	+		PFLU_RS16465	0.46	-0.3
3,736,099	+		PFLU_RS16465	0.46	+1.3
3,736,099	+		PFLU_RS16465	0.46	+0.9
3,736,100	-		PFLU_RS16465	0.47	-0.1
3,736,100	-		PFLU_RS16465	0.47	+3.5
3,736,100	-		PFLU_RS16465	0.47	+0.3
3,736,100	-		PFLU_RS16465	0.47	-0.9
3,736,112	+		PFLU_RS16465	0.47	+1.7
3,736,112	+		PFLU_RS16465	0.47	-2.6
3,736,113	-		PFLU_RS16465	0.47	+1.4
3,736,113	-		PFLU_RS16465	0.47	-1.1
3,736,144	-		PFLU_RS16465	0.50	+1.0
3,736,425	+		PFLU_RS16465	0.69	+0.1
3,736,425	+		PFLU_RS16465	0.69	-2.1
3,736,425	+		PFLU_RS16465	0.69	-0.6
3,736,425	+		PFLU_RS16465	0.69	+0.1
3,736,426	-		PFLU_RS16465	0.69	-0.6
3,736,426	-		PFLU_RS16465	0.69	+2.2
3,736,426	-		PFLU_RS16465	0.69	+0.1
3,736,426	-		PFLU_RS16465	0.69	+0.4
3,736,559	-		PFLU_RS16465	0.79	-1.3
3,736,598	-		PFLU_RS16465	0.81	+2.0
3,736,675	+		PFLU_RS16465	0.87	-1.3
3,736,676	-		PFLU_RS16465	0.87	+0.7
3,736,676	-		PFLU_RS16465	0.87	-2.0
3,736,676	-		PFLU_RS16465	0.87	-1.8
3,736,699	+		PFLU_RS16465	0.89	+0.6
3,736,699	+		PFLU_RS16465	0.89	+0.7
3,736,699	+		PFLU_RS16465	0.89	-0.3
3,736,699	+		PFLU_RS16465	0.89	-0.1
3,736,699	+		PFLU_RS16465	0.89	+0.1
3,736,699	+		PFLU_RS16465	0.89	-0.9
3,736,699	+		PFLU_RS16465	0.89	+1.0
3,736,699	+		PFLU_RS16465	0.89	-0.3
3,736,699	+		PFLU_RS16465	0.89	+1.7
3,736,700	-		PFLU_RS16465	0.89	-1.8
3,736,700	-		PFLU_RS16465	0.89	+0.7
3,736,700	-		PFLU_RS16465	0.89	+1.6
3,736,700	-		PFLU_RS16465	0.89	-2.1
3,736,700	-		PFLU_RS16465	0.89	+3.0
3,736,700	-		PFLU_RS16465	0.89	+0.7
3,736,700	-		PFLU_RS16465	0.89	+2.0
3,736,700	-		PFLU_RS16465	0.89	-0.8
3,736,700	-		PFLU_RS16465	0.89	+2.3
3,736,700	-		PFLU_RS16465	0.89	+1.4
3,736,700	-		PFLU_RS16465	0.89	-2.4
3,736,838	-				+0.6
3,736,878	+				-1.5
3,736,878	+				+0.7
3,736,878	+				-0.6
3,736,878	+				+1.3
3,736,878	+				+2.6
3,736,878	+				+3.5
3,736,878	+				+2.2
3,736,878	+				+0.1
3,736,879	-				+0.8
3,736,879	-				+1.1
3,736,922	+				+0.3
3,736,923	-				+0.5
3,736,988	+				+3.2
3,736,988	+				-0.8
3,736,989	-				-0.6
3,736,989	-				+0.1
3,736,989	-				-0.6
3,736,989	-				-0.3
3,736,989	-				-1.1
3,736,989	-				+1.3
3,736,989	-				+0.6
3,737,085	+		PFLU_RS16470	0.16	+0.1
3,737,086	-		PFLU_RS16470	0.16	+2.8
3,737,183	+		PFLU_RS16470	0.25	-1.2
3,737,217	-		PFLU_RS16470	0.29	+1.5
3,737,217	-		PFLU_RS16470	0.29	+1.7
3,737,320	+		PFLU_RS16470	0.39	+0.7
3,737,320	+		PFLU_RS16470	0.39	+1.7
3,737,320	+		PFLU_RS16470	0.39	+1.8
3,737,320	+		PFLU_RS16470	0.39	+0.9
3,737,320	+		PFLU_RS16470	0.39	+1.8
3,737,320	+		PFLU_RS16470	0.39	+1.1
3,737,320	+		PFLU_RS16470	0.39	+0.7
3,737,320	+		PFLU_RS16470	0.39	-1.1
3,737,320	+		PFLU_RS16470	0.39	+0.7
3,737,320	+		PFLU_RS16470	0.39	+2.8
3,737,320	+		PFLU_RS16470	0.39	+1.8
3,737,321	-		PFLU_RS16470	0.39	-0.9
3,737,321	-		PFLU_RS16470	0.39	+0.5
3,737,321	-		PFLU_RS16470	0.39	-0.3
3,737,321	-		PFLU_RS16470	0.39	+1.3
3,737,321	-		PFLU_RS16470	0.39	+1.7
3,737,321	-		PFLU_RS16470	0.39	-0.2
3,737,321	-		PFLU_RS16470	0.39	+0.6
3,737,321	-		PFLU_RS16470	0.39	-0.3
3,737,321	-		PFLU_RS16470	0.39	-0.3
3,737,337	-		PFLU_RS16470	0.40	-0.9
3,737,447	+		PFLU_RS16470	0.51	+1.0
3,737,447	+		PFLU_RS16470	0.51	-0.5
3,737,448	-		PFLU_RS16470	0.51	-1.8
3,737,448	-		PFLU_RS16470	0.51	-0.2
3,737,453	+		PFLU_RS16470	0.51	-1.5
3,737,465	+		PFLU_RS16470	0.53	+1.2
3,737,465	+		PFLU_RS16470	0.53	+1.5
3,737,466	-		PFLU_RS16470	0.53	+0.7
3,737,466	-		PFLU_RS16470	0.53	+2.0
3,737,466	-		PFLU_RS16470	0.53	+0.1
3,737,466	-		PFLU_RS16470	0.53	+3.6
3,737,517	-		PFLU_RS16470	0.58	+0.2
3,737,517	-		PFLU_RS16470	0.58	-1.9
3,737,517	-		PFLU_RS16470	0.58	+0.8
3,737,517	-		PFLU_RS16470	0.58	+0.7
3,737,759	+		PFLU_RS16470	0.81	+1.0
3,737,759	+		PFLU_RS16470	0.81	-1.1
3,737,759	+		PFLU_RS16470	0.81	+1.0
3,737,760	-		PFLU_RS16470	0.81	-1.2
3,737,760	-		PFLU_RS16470	0.81	-0.6
3,737,784	-		PFLU_RS16470	0.83	+1.9
3,737,784	-		PFLU_RS16470	0.83	+0.1
3,737,784	-		PFLU_RS16470	0.83	+3.0