Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05475

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
1,225,380	+				-2.6
1,225,381	-				-0.6
1,225,389	+				+1.9
1,225,389	+				+2.0
1,225,389	+				+3.2
1,225,389	+				+0.8
1,225,389	+				+0.4
1,225,389	+				-0.8
1,225,390	-				+1.5
1,225,582	-				+2.0
1,225,582	-				+3.0
1,225,582	-				+2.6
1,225,800	-				-0.3
1,225,847	+				+0.3
1,225,847	+				+1.6
1,225,847	+				+1.2
1,225,847	+				-1.5
1,225,847	+				-2.8
1,225,848	-				-1.7
1,225,848	-				-0.3
1,226,015	+				-1.4
1,226,079	+				+0.2
1,226,079	+				-0.9
1,226,079	+				+1.8
1,226,079	+				-2.0
1,226,080	-				+0.7
1,226,080	-				-0.3
1,226,157	+				-0.4
1,226,157	+				-0.2
1,226,158	-				-0.3
1,226,178	+				+1.0
1,226,181	-				+1.2
1,226,181	-				-0.4
1,226,209	+				-2.5
1,226,210	-				+0.6
1,226,212	-				-0.1
1,226,250	-				-0.3
1,226,283	+				+2.6
1,226,283	+				+0.3
1,226,283	+				-1.7
1,226,284	-				+0.2
1,226,284	-				-0.8
1,226,293	-				-0.3
1,226,322	-				-1.8
1,226,337	+				-0.5
1,226,337	+				+0.7
1,226,337	+				+0.5
1,226,337	+				+0.6
1,226,338	-				-0.8
1,226,338	-				+1.8
1,226,338	-				-0.5
1,226,338	-				+0.6
1,226,338	-				+0.6
1,226,343	+				-0.9
1,226,343	+				+2.3
1,226,343	+				+0.5
1,226,343	+				+0.2
1,226,343	+				-2.2
1,226,343	+				-0.2
1,226,343	+				+0.2
1,226,344	-				+0.2
1,226,344	-				-2.3
1,226,421	+				-1.0
1,226,518	+		PFLU_RS05475	0.12	-1.7
1,226,518	+		PFLU_RS05475	0.12	-1.0
1,226,519	-		PFLU_RS05475	0.12	-1.2
1,226,519	-		PFLU_RS05475	0.12	+2.4
1,226,519	-		PFLU_RS05475	0.12	-0.0
1,226,519	-		PFLU_RS05475	0.12	-2.4
1,226,519	-		PFLU_RS05475	0.12	-0.6
1,226,519	-		PFLU_RS05475	0.12	-2.0
1,226,519	-		PFLU_RS05475	0.12	+1.2
1,226,519	-		PFLU_RS05475	0.12	+2.4
1,226,519	-		PFLU_RS05475	0.12	-0.3
1,226,609	-		PFLU_RS05475	0.19	+0.4
1,226,620	+		PFLU_RS05475	0.20	+0.1
1,226,620	+		PFLU_RS05475	0.20	+4.4
1,226,621	-		PFLU_RS05475	0.20	-1.0
1,226,621	-		PFLU_RS05475	0.20	-1.6
1,226,659	+		PFLU_RS05475	0.22	+2.4
1,226,713	+		PFLU_RS05475	0.26	+0.6
1,226,713	+		PFLU_RS05475	0.26	+2.3
1,226,713	+		PFLU_RS05475	0.26	+0.7
1,226,713	+		PFLU_RS05475	0.26	+0.4
1,226,713	+		PFLU_RS05475	0.26	-0.6
1,226,713	+		PFLU_RS05475	0.26	-0.9
1,226,714	-		PFLU_RS05475	0.26	-0.3
1,226,714	-		PFLU_RS05475	0.26	+2.6
1,226,714	-		PFLU_RS05475	0.26	-1.4
1,226,714	-		PFLU_RS05475	0.26	-3.2
1,226,714	-		PFLU_RS05475	0.26	-1.0
1,226,714	-		PFLU_RS05475	0.26	+4.2
1,226,714	-		PFLU_RS05475	0.26	-0.6
1,226,714	-		PFLU_RS05475	0.26	-2.4
1,226,979	-		PFLU_RS05475	0.45	+1.2
1,227,115	+		PFLU_RS05475	0.55	-1.7
1,227,115	+		PFLU_RS05475	0.55	-0.2
1,227,115	+		PFLU_RS05475	0.55	-0.4
1,227,115	+		PFLU_RS05475	0.55	-0.1
1,227,115	+		PFLU_RS05475	0.55	-0.6
1,227,116	-		PFLU_RS05475	0.55	+0.1
1,227,116	-		PFLU_RS05475	0.55	-0.2
1,227,116	-		PFLU_RS05475	0.55	-0.5
1,227,116	-		PFLU_RS05475	0.55	-0.4
1,227,304	+		PFLU_RS05475	0.68	-0.7
1,227,304	+		PFLU_RS05475	0.68	-0.6
1,227,305	-		PFLU_RS05475	0.68	-0.4
1,227,357	+		PFLU_RS05475	0.72	-1.0
1,227,358	-		PFLU_RS05475	0.72	-1.7
1,227,424	+		PFLU_RS05475	0.77	-2.6
1,227,424	+		PFLU_RS05475	0.77	+1.5
1,227,424	+		PFLU_RS05475	0.77	-1.1
1,227,425	-		PFLU_RS05475	0.77	-0.4
1,227,425	-		PFLU_RS05475	0.77	-1.9
1,227,425	-		PFLU_RS05475	0.77	-0.8
1,227,425	-		PFLU_RS05475	0.77	+1.1
1,227,425	-		PFLU_RS05475	0.77	-2.1
1,227,425	-		PFLU_RS05475	0.77	+1.2
1,227,562	+		PFLU_RS05475	0.86	+1.9
1,227,563	-		PFLU_RS05475	0.86	-1.3
1,227,592	+		PFLU_RS05475	0.89	+0.9
1,227,637	+				-0.0
1,227,637	+				-0.8
1,227,637	+				-0.8
1,227,638	-				-0.0
1,227,638	-				+2.2
1,227,664	+				-0.2
1,227,664	+				+3.1
1,227,665	-				-0.1
1,227,686	+				+0.9
1,227,687	-				-1.9
1,227,706	+				-0.9
1,227,706	+				+1.3
1,227,706	+				+0.4
1,227,706	+				+1.6
1,227,706	+				+0.4
1,227,706	+				-0.9
1,227,706	+				+0.8
1,227,707	-				-0.3
1,227,707	-				+2.4
1,227,707	-				+1.0
1,227,707	-				-1.3
1,227,707	-				+0.3
1,227,707	-				-3.0
1,227,707	-				-1.4
1,227,751	+				-2.6
1,227,751	+				-0.2
1,227,827	+				+1.7
1,227,828	-				-1.0
1,227,850	+				+0.3
1,227,850	+				-0.1
1,227,850	+				+2.9
1,227,851	-				+2.0
1,227,876	-				+1.5
1,227,965	+				-1.8
1,227,980	+				-1.3
1,227,980	+				-0.8
1,227,981	-				+0.5
1,228,100	+				-1.4
1,228,100	+				-0.8
1,228,100	+				+0.0
1,228,100	+				+2.0
1,228,101	-				+3.0
1,228,101	-				+2.2
1,228,101	-				-0.8
1,228,101	-				-1.2
1,228,101	-				+0.7
1,228,101	-				+1.4
1,228,101	-				-1.5
1,228,101	-				-1.9
1,228,253	+				+2.0
1,228,253	+				+0.4
1,228,254	-				-0.6
1,228,254	-				-0.6
1,228,392	-				+0.7
1,228,505	+		PFLU_RS05480	0.11	+1.3
1,228,505	+		PFLU_RS05480	0.11	-1.6
1,228,505	+		PFLU_RS05480	0.11	-0.2
1,228,605	+		PFLU_RS05480	0.13	-1.2
1,228,606	-		PFLU_RS05480	0.13	+0.6
1,228,616	-		PFLU_RS05480	0.13	+0.3
1,228,616	-		PFLU_RS05480	0.13	+2.2
1,228,632	+		PFLU_RS05480	0.13	-1.0
1,228,632	+		PFLU_RS05480	0.13	+1.2
1,228,632	+		PFLU_RS05480	0.13	-2.7
1,228,633	-		PFLU_RS05480	0.13	+1.7
1,228,712	+		PFLU_RS05480	0.14	-1.6