Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04740

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
1,059,339	+				+0.9
1,059,339	+				+1.2
1,059,363	+				+2.1
1,059,363	+				-0.3
1,059,363	+				-0.1
1,059,363	+				+1.5
1,059,364	-				-0.4
1,059,364	-				+0.6
1,059,364	-				+2.1
1,059,367	+				+0.1
1,059,368	-				+3.5
1,059,368	-				+1.4
1,059,368	-				-1.1
1,059,368	-				-2.4
1,059,384	+				-1.2
1,059,444	-				-0.4
1,059,444	-				-0.6
1,059,444	-				+0.9
1,059,482	+				+0.8
1,059,482	+				-1.8
1,059,482	+				-2.7
1,059,482	+				-1.6
1,059,483	-				+1.0
1,059,483	-				-1.0
1,059,504	+				+1.2
1,059,504	+				-0.8
1,059,505	-				+0.2
1,059,541	-				-1.3
1,059,541	-				+0.2
1,059,581	-				-1.9
1,059,581	-				-1.7
1,059,581	-				-0.9
1,059,581	-				+1.7
1,059,658	-				-0.6
1,059,735	-				-1.1
1,059,747	-				+1.1
1,059,960	+		PFLU_RS04740	0.49	-1.1
1,059,961	-		PFLU_RS04740	0.49	+0.6
1,059,974	+		PFLU_RS04740	0.52	-1.2
1,059,975	-		PFLU_RS04740	0.52	+0.8
1,059,991	+		PFLU_RS04740	0.55	+2.5
1,059,996	+		PFLU_RS04740	0.56	+0.0
1,059,996	+		PFLU_RS04740	0.56	-1.6
1,059,997	-		PFLU_RS04740	0.57	-1.7
1,060,072	+		PFLU_RS04740	0.72	+1.2
1,060,072	+		PFLU_RS04740	0.72	-1.7
1,060,073	-		PFLU_RS04740	0.73	+0.4
1,060,073	-		PFLU_RS04740	0.73	+1.0
1,060,161	+				-0.6
1,060,161	+				-0.5
1,060,161	+				-1.4
1,060,161	+				-1.5
1,060,162	-				-0.1
1,060,162	-				-2.6
1,060,194	+				+1.0
1,060,194	+				-1.2
1,060,194	+				+0.8
1,060,194	+				+1.2
1,060,194	+				+1.9
1,060,194	+				+0.9
1,060,194	+				-1.5
1,060,194	+				-2.7
1,060,194	+				-0.1
1,060,195	-				+2.2
1,060,195	-				-1.6
1,060,195	-				+0.1
1,060,195	-				-2.2
1,060,195	-				+1.2
1,060,200	+				-1.1
1,060,200	+				-0.8
1,060,200	+				-0.1
1,060,200	+				-0.2
1,060,200	+				+1.5
1,060,201	-				+0.4
1,060,201	-				+0.2
1,060,201	-				+0.1
1,060,201	-				+1.5
1,060,201	-				-1.4
1,060,201	-				-1.7
1,060,203	+				+1.2
1,060,203	+				+1.2
1,060,203	+				+1.4
1,060,203	+				+3.6
1,060,203	+				-0.7
1,060,204	-				-1.5
1,060,204	-				+0.1
1,060,204	-				-0.1
1,060,204	-				-0.6
1,060,204	-				+2.2
1,060,204	-				-2.6
1,060,275	+				+2.6
1,060,275	+				-0.1
1,060,275	+				-0.1
1,060,275	+				-1.2
1,060,275	+				+0.2
1,060,276	-				-0.6
1,060,276	-				+2.2
1,060,276	-				+2.5
1,060,276	-				-1.7
1,060,276	-				-1.3
1,060,276	-				-0.8
1,060,276	-				+3.1
1,060,276	-				+0.2
1,060,283	+				+0.6
1,060,283	+				+2.0
1,060,283	+				+0.6
1,060,284	-				+0.3
1,060,284	-				+1.2
1,060,295	+				-0.8
1,060,295	+				-2.6
1,060,295	+				-2.4
1,060,295	+				-0.3
1,060,295	+				+2.5
1,060,296	-		PFLU_RS30220	0.10	-3.0
1,060,296	-		PFLU_RS30220	0.10	+0.3
1,060,299	+		PFLU_RS30220	0.10	+1.2
1,060,299	+		PFLU_RS30220	0.10	+3.5
1,060,299	+		PFLU_RS30220	0.10	-1.8
1,060,299	+		PFLU_RS30220	0.10	+1.4
1,060,299	+		PFLU_RS30220	0.10	+0.1
1,060,299	+		PFLU_RS30220	0.10	-3.2
1,060,299	+		PFLU_RS30220	0.10	-1.2
1,060,299	+		PFLU_RS30220	0.10	+1.7
1,060,300	-		PFLU_RS30220	0.10	+0.6
1,060,300	-		PFLU_RS30220	0.10	+1.9
1,060,300	-		PFLU_RS30220	0.10	-2.5
1,060,300	-		PFLU_RS30220	0.10	-1.7
1,060,300	-		PFLU_RS30220	0.10	-0.4
1,060,300	-		PFLU_RS30220	0.10	+2.2
1,060,300	-		PFLU_RS30220	0.10	+3.8
1,060,300	-		PFLU_RS30220	0.10	-1.5
1,060,334	+		PFLU_RS30220	0.14	+1.9
1,060,334	+		PFLU_RS30220	0.14	-0.9
1,060,335	-		PFLU_RS30220	0.14	-1.5
1,060,500	+		PFLU_RS30220	0.30	-2.8
1,060,532	-		PFLU_RS30220	0.34	+2.3
1,060,533	+		PFLU_RS30220	0.34	+2.0
1,060,587	+		PFLU_RS30220	0.39	-1.8
1,060,587	+		PFLU_RS30220	0.39	+0.1
1,060,611	+		PFLU_RS30220	0.41	-1.7
1,060,612	-		PFLU_RS30220	0.41	+1.6
1,060,614	+		PFLU_RS30220	0.42	-0.4
1,060,614	+		PFLU_RS30220	0.42	-0.4
1,060,689	+		PFLU_RS30220	0.49	+1.3
1,060,704	+		PFLU_RS30220	0.51	-0.2
1,060,723	-		PFLU_RS30220	0.53	+0.4
1,060,723	-		PFLU_RS30220	0.53	+5.0
1,060,725	-		PFLU_RS30220	0.53	+1.8
1,060,725	-		PFLU_RS30220	0.53	-2.8
1,060,725	-		PFLU_RS30220	0.53	-0.7
1,060,725	-		PFLU_RS30220	0.53	-0.9
1,060,810	-		PFLU_RS30220	0.61	-1.5
1,060,862	+		PFLU_RS30220	0.66	-1.0
1,060,911	+		PFLU_RS30220	0.71	+2.8
1,060,911	+		PFLU_RS30220	0.71	+1.4
1,060,911	+		PFLU_RS30220	0.71	+1.3
1,060,912	-		PFLU_RS30220	0.71	-1.4
1,060,912	-		PFLU_RS30220	0.71	+0.6
1,060,912	-		PFLU_RS30220	0.71	+2.4
1,060,913	+		PFLU_RS30220	0.71	+1.5
1,060,913	+		PFLU_RS30220	0.71	+0.2
1,060,913	+		PFLU_RS30220	0.71	-3.3
1,060,913	+		PFLU_RS30220	0.71	-0.4
1,060,914	-		PFLU_RS30220	0.72	+1.6
1,060,914	-		PFLU_RS30220	0.72	-2.4
1,060,914	-		PFLU_RS30220	0.72	-1.5
1,060,914	-		PFLU_RS30220	0.72	+0.3
1,060,914	-		PFLU_RS30220	0.72	-1.4
1,060,914	-		PFLU_RS30220	0.72	+2.4
1,060,914	-		PFLU_RS30220	0.72	+0.2
1,060,914	-		PFLU_RS30220	0.72	-1.1
1,060,914	-		PFLU_RS30220	0.72	+1.2
1,060,914	-		PFLU_RS30220	0.72	+2.3
1,060,914	-		PFLU_RS30220	0.72	-2.2
1,061,064	+		PFLU_RS30220	0.86	-1.8
1,061,064	+		PFLU_RS30220	0.86	+1.7
1,061,064	+		PFLU_RS30220	0.86	+0.2
1,061,064	+		PFLU_RS30220	0.86	-0.0
1,061,064	+		PFLU_RS30220	0.86	+2.4
1,061,064	+		PFLU_RS30220	0.86	-1.2
1,061,064	+		PFLU_RS30220	0.86	+0.7
1,061,065	-		PFLU_RS30220	0.87	-0.8
1,061,065	-		PFLU_RS30220	0.87	+0.1
1,061,065	-		PFLU_RS30220	0.87	+2.4
1,061,065	-		PFLU_RS30220	0.87	-0.1
1,061,065	-		PFLU_RS30220	0.87	-0.0
1,061,065	-		PFLU_RS30220	0.87	-1.1
1,061,065	-		PFLU_RS30220	0.87	+1.8
1,061,097	+		PFLU_RS30220	0.90	+1.9
1,061,097	+		PFLU_RS30220	0.90	-2.0
1,061,098	-		PFLU_RS30220	0.90	+0.6
1,061,106	+				-2.7
1,061,107	-				-0.6
1,061,116	+				+2.7
1,061,117	-				+1.0
1,061,117	-				+0.6
1,061,117	-				+2.2
1,061,129	+				+2.4
1,061,129	+				-0.1
1,061,129	+				+1.8
1,061,161	+				+0.1
1,061,161	+				+0.2
1,061,161	+				+2.2
1,061,161	+				-0.8
1,061,161	+				+0.6
1,061,161	+				-3.2
1,061,161	+				+0.5
1,061,161	+				-0.4
1,061,161	+				+2.1
1,061,161	+				+0.4
1,061,161	+				-1.2
1,061,161	+				-2.2
1,061,161	+				+0.7
1,061,161	+				-1.8
1,061,161	+				+3.6
1,061,161	+				+0.5
1,061,161	+				-0.9
1,061,161	+				-0.7
1,061,161	+				-0.1
1,061,161	+				+0.7
1,061,161	+				-0.9
1,061,161	+				-0.7
1,061,161	+				+1.1
1,061,161	+				+1.1
1,061,161	+				-0.3
1,061,161	+				-1.2
1,061,161	+				+2.4
1,061,161	+				-0.7
1,061,161	+				-1.3
1,061,161	+				+0.9
1,061,161	+				-0.6
1,061,161	+				-0.2
1,061,161	+				-1.9
1,061,161	+				-1.7
1,061,161	+				-0.7
1,061,161	+				-1.5
1,061,162	-				+0.2
1,061,162	-				+1.2
1,061,162	-				-0.1
1,061,162	-				+1.3
1,061,162	-				+0.3
1,061,162	-				+2.1
1,061,162	-				+2.0
1,061,162	-				+2.6
1,061,162	-				-0.9
1,061,162	-				+3.0
1,061,162	-				-1.1
1,061,162	-				+0.1
1,061,162	-				+0.1
1,061,162	-				+1.5
1,061,162	-				+1.1
1,061,162	-				+2.1
1,061,162	-				+0.2
1,061,162	-				-1.9
1,061,162	-				-1.1
1,061,162	-				+0.4
1,061,162	-				-0.4
1,061,162	-				+2.8
1,061,162	-				+2.2
1,061,162	-				-1.9
1,061,163	+				-0.9
1,061,163	+				-3.1
1,061,163	+				+2.2
1,061,163	+				-1.1
1,061,164	-				-0.2
1,061,164	-				-1.4
1,061,164	-				-1.2
1,061,197	+				-0.6
1,061,197	+				-0.9
1,061,198	-				+0.4
1,061,198	-				+0.9