Experiment: 4-Aminobutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04445 and PFLU_RS04450 overlap by 4 nucleotides PFLU_RS04450 and PFLU_RS04455 are separated by 114 nucleotides PFLU_RS04455 and PFLU_RS04460 are separated by 23 nucleotides
PFLU_RS04445: PFLU_RS04445 - ABC transporter substrate-binding protein, at 998,755 to 999,402
_RS04445
PFLU_RS04450: PFLU_RS04450 - STAS domain-containing protein, at 999,399 to 999,704
_RS04450
PFLU_RS04455: PFLU_RS04455 - BolA family transcriptional regulator, at 999,819 to 1,000,058
_RS04455
PFLU_RS04460: PFLU_RS04460 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,000,082 to 1,001,347
_RS04460
Position (kb) 999
1000
1001 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 998.896 kb on + strand, within PFLU_RS04445 at 998.896 kb on + strand, within PFLU_RS04445 at 998.896 kb on + strand, within PFLU_RS04445 at 998.897 kb on - strand, within PFLU_RS04445 at 998.920 kb on + strand, within PFLU_RS04445 at 998.920 kb on + strand, within PFLU_RS04445 at 998.920 kb on + strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.921 kb on - strand, within PFLU_RS04445 at 998.934 kb on + strand, within PFLU_RS04445 at 998.934 kb on + strand, within PFLU_RS04445 at 998.934 kb on + strand, within PFLU_RS04445 at 998.935 kb on - strand, within PFLU_RS04445 at 998.935 kb on - strand, within PFLU_RS04445 at 998.982 kb on + strand, within PFLU_RS04445 at 998.982 kb on + strand, within PFLU_RS04445 at 998.983 kb on - strand, within PFLU_RS04445 at 998.995 kb on + strand, within PFLU_RS04445 at 998.995 kb on + strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 998.996 kb on - strand, within PFLU_RS04445 at 999.068 kb on - strand, within PFLU_RS04445 at 999.068 kb on - strand, within PFLU_RS04445 at 999.088 kb on + strand, within PFLU_RS04445 at 999.088 kb on + strand, within PFLU_RS04445 at 999.088 kb on + strand, within PFLU_RS04445 at 999.088 kb on + strand, within PFLU_RS04445 at 999.088 kb on + strand, within PFLU_RS04445 at 999.089 kb on - strand, within PFLU_RS04445 at 999.089 kb on - strand, within PFLU_RS04445 at 999.106 kb on - strand, within PFLU_RS04445 at 999.197 kb on - strand, within PFLU_RS04445 at 999.197 kb on - strand, within PFLU_RS04445 at 999.197 kb on - strand, within PFLU_RS04445 at 999.197 kb on - strand, within PFLU_RS04445 at 999.235 kb on - strand, within PFLU_RS04445 at 999.375 kb on + strand at 999.574 kb on + strand, within PFLU_RS04450 at 999.702 kb on + strand at 999.702 kb on + strand at 999.703 kb on - strand at 999.703 kb on - strand at 999.703 kb on - strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.705 kb on + strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.706 kb on - strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.712 kb on + strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.713 kb on - strand at 999.715 kb on + strand at 999.715 kb on + strand at 999.716 kb on - strand at 999.716 kb on - strand at 999.716 kb on - strand at 999.742 kb on + strand at 999.743 kb on - strand at 999.743 kb on - strand at 999.743 kb on - strand at 999.743 kb on - strand at 999.774 kb on + strand at 999.774 kb on + strand at 999.774 kb on + strand at 999.829 kb on + strand at 999.829 kb on + strand at 999.836 kb on + strand at 999.836 kb on + strand at 999.836 kb on + strand at 999.874 kb on + strand, within PFLU_RS04455 at 999.874 kb on + strand, within PFLU_RS04455 at 999.874 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 999.966 kb on + strand, within PFLU_RS04455 at 1000.016 kb on + strand, within PFLU_RS04455
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Aminobutyric (C) remove 998,896 + PFLU_RS04445 0.22 +2.0 998,896 + PFLU_RS04445 0.22 -1.3 998,896 + PFLU_RS04445 0.22 +3.6 998,897 - PFLU_RS04445 0.22 +2.2 998,920 + PFLU_RS04445 0.25 -1.0 998,920 + PFLU_RS04445 0.25 +1.2 998,920 + PFLU_RS04445 0.25 +2.9 998,921 - PFLU_RS04445 0.26 +0.7 998,921 - PFLU_RS04445 0.26 +2.2 998,921 - PFLU_RS04445 0.26 +0.2 998,921 - PFLU_RS04445 0.26 +0.2 998,921 - PFLU_RS04445 0.26 +2.2 998,921 - PFLU_RS04445 0.26 +3.2 998,934 + PFLU_RS04445 0.28 +3.5 998,934 + PFLU_RS04445 0.28 -0.8 998,934 + PFLU_RS04445 0.28 +0.6 998,935 - PFLU_RS04445 0.28 +2.5 998,935 - PFLU_RS04445 0.28 +0.6 998,982 + PFLU_RS04445 0.35 -0.8 998,982 + PFLU_RS04445 0.35 -0.4 998,983 - PFLU_RS04445 0.35 +1.4 998,995 + PFLU_RS04445 0.37 -1.7 998,995 + PFLU_RS04445 0.37 -0.4 998,996 - PFLU_RS04445 0.37 +2.3 998,996 - PFLU_RS04445 0.37 +1.2 998,996 - PFLU_RS04445 0.37 +3.7 998,996 - PFLU_RS04445 0.37 -0.4 998,996 - PFLU_RS04445 0.37 -0.8 998,996 - PFLU_RS04445 0.37 +0.6 998,996 - PFLU_RS04445 0.37 -0.8 999,068 - PFLU_RS04445 0.48 -1.0 999,068 - PFLU_RS04445 0.48 -0.3 999,088 + PFLU_RS04445 0.51 +0.2 999,088 + PFLU_RS04445 0.51 +2.9 999,088 + PFLU_RS04445 0.51 -0.1 999,088 + PFLU_RS04445 0.51 -0.1 999,088 + PFLU_RS04445 0.51 -0.8 999,089 - PFLU_RS04445 0.52 +3.0 999,089 - PFLU_RS04445 0.52 -0.6 999,106 - PFLU_RS04445 0.54 -0.4 999,197 - PFLU_RS04445 0.68 -1.4 999,197 - PFLU_RS04445 0.68 -1.0 999,197 - PFLU_RS04445 0.68 -0.4 999,197 - PFLU_RS04445 0.68 -0.6 999,235 - PFLU_RS04445 0.74 -0.4 999,375 + +1.2 999,574 + PFLU_RS04450 0.57 +0.2 999,702 + +0.8 999,702 + -0.5 999,703 - +0.3 999,703 - +1.6 999,703 - +0.0 999,705 + +1.8 999,705 + -2.2 999,705 + +2.5 999,705 + +2.2 999,705 + -0.5 999,705 + -1.0 999,705 + +1.8 999,705 + -1.8 999,705 + +4.2 999,706 - +4.3 999,706 - -1.3 999,706 - -0.6 999,706 - -1.3 999,706 - +0.8 999,706 - +3.8 999,706 - -1.1 999,706 - -2.3 999,706 - -0.6 999,706 - +0.9 999,706 - +2.1 999,706 - +3.2 999,706 - +1.4 999,712 + +2.1 999,712 + +1.4 999,712 + -0.2 999,712 + -1.3 999,712 + -0.7 999,712 + -0.1 999,712 + -2.3 999,712 + +0.6 999,712 + +1.1 999,712 + +1.4 999,713 - +0.6 999,713 - -0.2 999,713 - -0.3 999,713 - -2.3 999,713 - +0.6 999,713 - -0.9 999,713 - +2.2 999,713 - +0.7 999,713 - -0.6 999,713 - +2.1 999,713 - +3.0 999,713 - +0.3 999,715 + -0.9 999,715 + +2.1 999,716 - -2.2 999,716 - +1.1 999,716 - +0.3 999,742 + +1.1 999,743 - -0.3 999,743 - +1.4 999,743 - +0.2 999,743 - +1.9 999,774 + -1.1 999,774 + +0.1 999,774 + -0.7 999,829 + -0.1 999,829 + -0.1 999,836 + -1.1 999,836 + +0.2 999,836 + -1.0 999,874 + PFLU_RS04455 0.23 -1.3 999,874 + PFLU_RS04455 0.23 -1.1 999,874 + PFLU_RS04455 0.23 -0.4 999,966 + PFLU_RS04455 0.61 -0.1 999,966 + PFLU_RS04455 0.61 -1.8 999,966 + PFLU_RS04455 0.61 -2.2 999,966 + PFLU_RS04455 0.61 -1.3 999,966 + PFLU_RS04455 0.61 -1.1 999,966 + PFLU_RS04455 0.61 -0.6 999,966 + PFLU_RS04455 0.61 -1.1 999,966 + PFLU_RS04455 0.61 -0.1 999,966 + PFLU_RS04455 0.61 -1.3 999,966 + PFLU_RS04455 0.61 -1.1 999,966 + PFLU_RS04455 0.61 -0.1 999,966 + PFLU_RS04455 0.61 -1.8 999,966 + PFLU_RS04455 0.61 -0.4 999,966 + PFLU_RS04455 0.61 +0.8 999,966 + PFLU_RS04455 0.61 -1.1 999,966 + PFLU_RS04455 0.61 -1.4 999,966 + PFLU_RS04455 0.61 +0.9 999,966 + PFLU_RS04455 0.61 -1.3 999,966 + PFLU_RS04455 0.61 -0.1 999,966 + PFLU_RS04455 0.61 +1.1 1,000,016 + PFLU_RS04455 0.82 -1.0
Or see this region's nucleotide sequence