Experiment: 4-Aminobutyric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02095 and PFLU_RS02100 overlap by 4 nucleotides PFLU_RS02100 and PFLU_RS02105 overlap by 4 nucleotides PFLU_RS02105 and PFLU_RS02110 are separated by 33 nucleotides
PFLU_RS02095: PFLU_RS02095 - hypothetical protein, at 472,481 to 472,963
_RS02095
PFLU_RS02100: PFLU_RS02100 - class I SAM-dependent methyltransferase, at 472,960 to 473,709
_RS02100
PFLU_RS02105: PFLU_RS02105 - NAD(P)/FAD-dependent oxidoreductase, at 473,706 to 474,953
_RS02105
PFLU_RS02110: PFLU_RS02110 - MMPL family transporter, at 474,987 to 477,299
_RS02110
Position (kb) 473
474
475 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 472.706 kb on + strand, within PFLU_RS02095 at 472.706 kb on + strand, within PFLU_RS02095 at 472.706 kb on + strand, within PFLU_RS02095 at 472.706 kb on + strand, within PFLU_RS02095 at 472.707 kb on - strand, within PFLU_RS02095 at 473.096 kb on + strand, within PFLU_RS02100 at 473.096 kb on + strand, within PFLU_RS02100 at 473.096 kb on + strand, within PFLU_RS02100 at 473.096 kb on + strand, within PFLU_RS02100 at 473.096 kb on + strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.097 kb on - strand, within PFLU_RS02100 at 473.103 kb on - strand, within PFLU_RS02100 at 473.156 kb on + strand, within PFLU_RS02100 at 473.209 kb on + strand, within PFLU_RS02100 at 473.224 kb on - strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.225 kb on + strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.226 kb on - strand, within PFLU_RS02100 at 473.255 kb on + strand, within PFLU_RS02100 at 473.255 kb on + strand, within PFLU_RS02100 at 473.255 kb on + strand, within PFLU_RS02100 at 473.255 kb on + strand, within PFLU_RS02100 at 473.256 kb on - strand, within PFLU_RS02100 at 473.256 kb on - strand, within PFLU_RS02100 at 473.279 kb on + strand, within PFLU_RS02100 at 473.279 kb on + strand, within PFLU_RS02100 at 473.398 kb on + strand, within PFLU_RS02100 at 473.398 kb on + strand, within PFLU_RS02100 at 473.398 kb on + strand, within PFLU_RS02100 at 473.399 kb on - strand, within PFLU_RS02100 at 473.467 kb on + strand, within PFLU_RS02100 at 473.467 kb on + strand, within PFLU_RS02100 at 473.467 kb on + strand, within PFLU_RS02100 at 473.468 kb on - strand, within PFLU_RS02100 at 473.488 kb on + strand, within PFLU_RS02100 at 473.488 kb on + strand, within PFLU_RS02100 at 473.488 kb on + strand, within PFLU_RS02100 at 473.488 kb on + strand, within PFLU_RS02100 at 473.489 kb on - strand, within PFLU_RS02100 at 473.489 kb on - strand, within PFLU_RS02100 at 473.489 kb on - strand, within PFLU_RS02100 at 473.542 kb on + strand, within PFLU_RS02100 at 473.666 kb on + strand at 473.666 kb on + strand at 473.666 kb on + strand at 473.666 kb on + strand at 473.666 kb on + strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.667 kb on - strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.673 kb on + strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.674 kb on - strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.677 kb on + strand at 473.678 kb on - strand at 473.678 kb on - strand at 473.678 kb on - strand at 473.678 kb on - strand at 473.678 kb on - strand at 473.681 kb on + strand at 473.681 kb on + strand at 473.682 kb on - strand at 473.682 kb on - strand at 473.682 kb on - strand at 473.688 kb on + strand at 473.688 kb on + strand at 473.688 kb on + strand at 473.697 kb on + strand at 473.697 kb on + strand at 473.697 kb on + strand at 473.698 kb on - strand at 473.698 kb on - strand at 473.878 kb on + strand, within PFLU_RS02105 at 473.893 kb on + strand, within PFLU_RS02105 at 473.894 kb on - strand, within PFLU_RS02105 at 473.894 kb on - strand, within PFLU_RS02105 at 473.894 kb on - strand, within PFLU_RS02105 at 473.894 kb on - strand, within PFLU_RS02105 at 473.894 kb on - strand, within PFLU_RS02105 at 474.138 kb on - strand, within PFLU_RS02105 at 474.138 kb on - strand, within PFLU_RS02105 at 474.189 kb on - strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.314 kb on + strand, within PFLU_RS02105 at 474.315 kb on - strand, within PFLU_RS02105 at 474.315 kb on - strand, within PFLU_RS02105 at 474.493 kb on + strand, within PFLU_RS02105 at 474.494 kb on - strand, within PFLU_RS02105 at 474.527 kb on - strand, within PFLU_RS02105 at 474.671 kb on + strand, within PFLU_RS02105 at 474.672 kb on - strand, within PFLU_RS02105 at 474.672 kb on - strand, within PFLU_RS02105 at 474.694 kb on + strand, within PFLU_RS02105 at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.852 kb on + strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.853 kb on - strand at 474.978 kb on + strand at 474.990 kb on + strand at 474.990 kb on + strand at 474.990 kb on + strand at 474.990 kb on + strand at 474.991 kb on - strand at 474.991 kb on - strand at 475.028 kb on + strand at 475.028 kb on + strand at 475.028 kb on + strand at 475.028 kb on + strand at 475.028 kb on + strand at 475.029 kb on - strand at 475.029 kb on - strand at 475.070 kb on + strand at 475.195 kb on + strand at 475.196 kb on - strand at 475.196 kb on - strand at 475.704 kb on - strand, within PFLU_RS02110 at 475.704 kb on - strand, within PFLU_RS02110 at 475.704 kb on - strand, within PFLU_RS02110 at 475.768 kb on + strand, within PFLU_RS02110 at 475.769 kb on - strand, within PFLU_RS02110
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Aminobutyric (C) remove 472,706 + PFLU_RS02095 0.47 +0.0 472,706 + PFLU_RS02095 0.47 +0.3 472,706 + PFLU_RS02095 0.47 -0.8 472,706 + PFLU_RS02095 0.47 -1.8 472,707 - PFLU_RS02095 0.47 +1.7 473,096 + PFLU_RS02100 0.18 -0.4 473,096 + PFLU_RS02100 0.18 +1.2 473,096 + PFLU_RS02100 0.18 -1.1 473,096 + PFLU_RS02100 0.18 +1.2 473,096 + PFLU_RS02100 0.18 -0.3 473,097 - PFLU_RS02100 0.18 -1.8 473,097 - PFLU_RS02100 0.18 -2.6 473,097 - PFLU_RS02100 0.18 +1.6 473,097 - PFLU_RS02100 0.18 -0.2 473,097 - PFLU_RS02100 0.18 +1.7 473,097 - PFLU_RS02100 0.18 +0.3 473,103 - PFLU_RS02100 0.19 -0.8 473,156 + PFLU_RS02100 0.26 +2.7 473,209 + PFLU_RS02100 0.33 -1.2 473,224 - PFLU_RS02100 0.35 -2.1 473,225 + PFLU_RS02100 0.35 -1.4 473,225 + PFLU_RS02100 0.35 -2.3 473,225 + PFLU_RS02100 0.35 +0.7 473,225 + PFLU_RS02100 0.35 +0.9 473,225 + PFLU_RS02100 0.35 -1.1 473,225 + PFLU_RS02100 0.35 +0.3 473,225 + PFLU_RS02100 0.35 -2.2 473,225 + PFLU_RS02100 0.35 -2.3 473,225 + PFLU_RS02100 0.35 -2.1 473,225 + PFLU_RS02100 0.35 -0.3 473,225 + PFLU_RS02100 0.35 +3.0 473,225 + PFLU_RS02100 0.35 -2.6 473,225 + PFLU_RS02100 0.35 +1.8 473,225 + PFLU_RS02100 0.35 +0.8 473,225 + PFLU_RS02100 0.35 +0.9 473,225 + PFLU_RS02100 0.35 -2.6 473,226 - PFLU_RS02100 0.35 -2.4 473,226 - PFLU_RS02100 0.35 -1.3 473,226 - PFLU_RS02100 0.35 +0.2 473,226 - PFLU_RS02100 0.35 -0.3 473,226 - PFLU_RS02100 0.35 +1.5 473,226 - PFLU_RS02100 0.35 -1.2 473,226 - PFLU_RS02100 0.35 -1.1 473,226 - PFLU_RS02100 0.35 -1.6 473,226 - PFLU_RS02100 0.35 +1.5 473,255 + PFLU_RS02100 0.39 -0.2 473,255 + PFLU_RS02100 0.39 -2.5 473,255 + PFLU_RS02100 0.39 -0.8 473,255 + PFLU_RS02100 0.39 -1.8 473,256 - PFLU_RS02100 0.39 -0.7 473,256 - PFLU_RS02100 0.39 +0.9 473,279 + PFLU_RS02100 0.43 +1.8 473,279 + PFLU_RS02100 0.43 +0.5 473,398 + PFLU_RS02100 0.58 +1.9 473,398 + PFLU_RS02100 0.58 +1.8 473,398 + PFLU_RS02100 0.58 -0.7 473,399 - PFLU_RS02100 0.59 -0.8 473,467 + PFLU_RS02100 0.68 +2.5 473,467 + PFLU_RS02100 0.68 +1.5 473,467 + PFLU_RS02100 0.68 +0.2 473,468 - PFLU_RS02100 0.68 +3.0 473,488 + PFLU_RS02100 0.70 +0.3 473,488 + PFLU_RS02100 0.70 -0.9 473,488 + PFLU_RS02100 0.70 -1.4 473,488 + PFLU_RS02100 0.70 -0.2 473,489 - PFLU_RS02100 0.71 -0.3 473,489 - PFLU_RS02100 0.71 -0.0 473,489 - PFLU_RS02100 0.71 -1.6 473,542 + PFLU_RS02100 0.78 -1.0 473,666 + +0.6 473,666 + -0.8 473,666 + +0.2 473,666 + +2.1 473,666 + -2.4 473,667 - +3.1 473,667 - -1.2 473,667 - -2.0 473,667 - -0.5 473,667 - +2.2 473,667 - -0.8 473,667 - +1.1 473,667 - -1.0 473,667 - +0.5 473,667 - +1.0 473,667 - -1.9 473,673 + -1.5 473,673 + +1.5 473,673 + +0.2 473,673 + +1.0 473,673 + +2.5 473,673 + -0.8 473,673 + +0.6 473,673 + -1.7 473,673 + -1.8 473,673 + -1.1 473,674 - +2.5 473,674 - -0.2 473,674 - +0.0 473,674 - +0.1 473,674 - +0.5 473,674 - -2.6 473,674 - +0.3 473,674 - +0.2 473,674 - -1.3 473,677 + -2.3 473,677 + +2.4 473,677 + +1.4 473,677 + -1.8 473,677 + +0.3 473,677 + +1.6 473,677 + -2.3 473,677 + +2.0 473,677 + -0.1 473,677 + -2.2 473,677 + -2.0 473,677 + +1.6 473,678 - -1.8 473,678 - +2.2 473,678 - -2.6 473,678 - +2.0 473,678 - -0.2 473,681 + -2.9 473,681 + -0.6 473,682 - +0.2 473,682 - -1.3 473,682 - -1.8 473,688 + -1.2 473,688 + -1.1 473,688 + -2.5 473,697 + -1.8 473,697 + +1.1 473,697 + +1.3 473,698 - +1.3 473,698 - -1.6 473,878 + PFLU_RS02105 0.14 +1.3 473,893 + PFLU_RS02105 0.15 -2.5 473,894 - PFLU_RS02105 0.15 -1.1 473,894 - PFLU_RS02105 0.15 +0.7 473,894 - PFLU_RS02105 0.15 +1.3 473,894 - PFLU_RS02105 0.15 +0.8 473,894 - PFLU_RS02105 0.15 -0.1 474,138 - PFLU_RS02105 0.35 -2.5 474,138 - PFLU_RS02105 0.35 -1.2 474,189 - PFLU_RS02105 0.39 +2.1 474,314 + PFLU_RS02105 0.49 -0.8 474,314 + PFLU_RS02105 0.49 +0.2 474,314 + PFLU_RS02105 0.49 -0.3 474,314 + PFLU_RS02105 0.49 -1.8 474,314 + PFLU_RS02105 0.49 +0.6 474,314 + PFLU_RS02105 0.49 +0.7 474,315 - PFLU_RS02105 0.49 -0.3 474,315 - PFLU_RS02105 0.49 -1.7 474,493 + PFLU_RS02105 0.63 -2.2 474,494 - PFLU_RS02105 0.63 -1.4 474,527 - PFLU_RS02105 0.66 +1.7 474,671 + PFLU_RS02105 0.77 +0.6 474,672 - PFLU_RS02105 0.77 -1.5 474,672 - PFLU_RS02105 0.77 -1.4 474,694 + PFLU_RS02105 0.79 -1.1 474,852 + -0.7 474,852 + -1.5 474,852 + -1.5 474,852 + +0.3 474,852 + -0.7 474,852 + -1.7 474,852 + -0.5 474,852 + +0.2 474,852 + -2.2 474,852 + +0.2 474,852 + -0.3 474,852 + -0.3 474,852 + +0.2 474,852 + +0.2 474,852 + -0.3 474,852 + +2.2 474,852 + -0.8 474,853 - +2.8 474,853 - -1.0 474,853 - +0.7 474,853 - -1.8 474,853 - +0.6 474,853 - -1.4 474,853 - -1.6 474,853 - -0.0 474,853 - -0.3 474,853 - -2.7 474,853 - +0.4 474,853 - +0.4 474,853 - +1.6 474,853 - -0.7 474,853 - +1.1 474,853 - -0.7 474,853 - -2.0 474,853 - -2.8 474,853 - +1.4 474,853 - -2.6 474,853 - -0.7 474,853 - -2.6 474,853 - -0.3 474,853 - +1.5 474,853 - +1.6 474,978 + +1.2 474,990 + -0.8 474,990 + -0.4 474,990 + -0.3 474,990 + -0.8 474,991 - +0.6 474,991 - +2.3 475,028 + +1.3 475,028 + +0.6 475,028 + +2.1 475,028 + -0.1 475,028 + -0.7 475,029 - +0.3 475,029 - +1.9 475,070 + -0.6 475,195 + -1.6 475,196 - +2.8 475,196 - +3.1 475,704 - PFLU_RS02110 0.31 -0.1 475,704 - PFLU_RS02110 0.31 -0.4 475,704 - PFLU_RS02110 0.31 +0.2 475,768 + PFLU_RS02110 0.34 -1.2 475,769 - PFLU_RS02110 0.34 -0.8
Or see this region's nucleotide sequence