Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5994

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
6,809,194	+		Pf6N2E2_5992	0.47	+0.6
6,809,194	+		Pf6N2E2_5992	0.47	+0.6
6,809,194	+		Pf6N2E2_5992	0.47	+0.6
6,809,402	-		Pf6N2E2_5992	0.81	+0.6
6,809,432	+		Pf6N2E2_5992	0.86	-0.5
6,809,432	+		Pf6N2E2_5992	0.86	-0.4
6,809,433	-				-0.4
6,809,433	-		Pf6N2E2_5992	0.87	+0.2
6,809,616	+				-0.4
6,809,617	-				-1.0
6,809,617	-				-0.4
6,809,617	-				-0.5
6,809,617	-				-0.9
6,809,733	+		Pf6N2E2_5993	0.32	+0.6
6,809,734	-		Pf6N2E2_5993	0.33	+0.6
6,809,877	+				-0.6
6,809,877	+				+0.6
6,809,877	+				+0.6
6,809,877	+				+0.6
6,809,878	-				+0.6
6,809,878	-				-0.4
6,809,987	+				-0.8
6,809,987	+				-0.5
6,809,987	+				+0.6
6,809,988	-				+0.6
6,809,988	-				+0.6
6,809,988	-				+1.6
6,809,988	-				-0.4
6,809,988	-				-1.0
6,809,988	-				-1.0
6,809,988	-				-1.0
6,810,021	+				+0.6
6,810,106	+				-1.0
6,810,107	-				+0.6
6,810,316	+		Pf6N2E2_5994	0.65	-0.9
6,810,316	+		Pf6N2E2_5994	0.65	+0.6
6,810,316	+		Pf6N2E2_5994	0.65	-0.8
6,810,316	+		Pf6N2E2_5994	0.65	-3.5
6,810,316	+		Pf6N2E2_5994	0.65	-1.3
6,810,316	+		Pf6N2E2_5994	0.65	-0.7
6,810,316	+		Pf6N2E2_5994	0.65	+0.6
6,810,317	-		Pf6N2E2_5994	0.65	-0.4
6,810,325	+		Pf6N2E2_5994	0.68	-1.0
6,810,501	-				-1.0
6,810,562	+				+0.6
6,810,563	-				-1.2
6,810,600	+				+0.6
6,810,601	-				+0.6
6,810,601	-				-0.4
6,810,601	-				+0.6
6,810,601	-				+0.6
6,810,604	+				-0.4
6,810,604	+				+0.6
6,810,604	+				+0.6
6,810,605	-				+0.6
6,810,605	-				-0.8
6,810,605	-				-1.0
6,810,610	+				-0.4
6,810,643	+				+0.6
6,810,643	+				+0.6
6,810,644	-				+0.6
6,810,644	-				-0.7
6,810,644	-				+0.6
6,810,644	-				+0.2
6,810,769	-				+0.6
6,810,820	-				+0.6
6,810,852	+				-1.4
6,810,852	+				+0.6
6,810,852	+				-0.3
6,810,853	-				+0.6
6,810,853	-				+0.6
6,810,853	-				-0.4
6,810,853	-				+0.6
6,810,883	-				+0.6
6,810,977	+		Pf6N2E2_5995	0.11	-1.0
6,810,978	-		Pf6N2E2_5995	0.11	-1.0
6,810,978	-		Pf6N2E2_5995	0.11	-2.0
6,810,991	-		Pf6N2E2_5995	0.12	-1.4
6,811,034	+		Pf6N2E2_5995	0.15	-0.5
6,811,035	-		Pf6N2E2_5995	0.15	+0.6
6,811,035	-		Pf6N2E2_5995	0.15	+0.6
6,811,128	+		Pf6N2E2_5995	0.21	+0.6
6,811,195	-		Pf6N2E2_5995	0.26	-0.4
6,811,236	+		Pf6N2E2_5995	0.29	+0.6
6,811,236	+		Pf6N2E2_5995	0.29	-0.7
6,811,236	+		Pf6N2E2_5995	0.29	+0.6
6,811,236	+		Pf6N2E2_5995	0.29	-1.4
6,811,236	+		Pf6N2E2_5995	0.29	-0.4
6,811,236	+		Pf6N2E2_5995	0.29	-0.9
6,811,236	+		Pf6N2E2_5995	0.29	-0.4
6,811,236	+		Pf6N2E2_5995	0.29	+0.6
6,811,237	-		Pf6N2E2_5995	0.29	+0.6
6,811,237	-		Pf6N2E2_5995	0.29	+0.6
6,811,237	-		Pf6N2E2_5995	0.29	+0.6
6,811,237	-		Pf6N2E2_5995	0.29	-0.7
6,811,237	-		Pf6N2E2_5995	0.29	+0.6
6,811,237	-		Pf6N2E2_5995	0.29	-1.8
6,811,237	-		Pf6N2E2_5995	0.29	-0.9
6,811,237	-		Pf6N2E2_5995	0.29	-0.5
6,811,284	+		Pf6N2E2_5995	0.33	+0.6
6,811,284	+		Pf6N2E2_5995	0.33	+0.6
6,811,284	+		Pf6N2E2_5995	0.33	-1.0
6,811,284	+		Pf6N2E2_5995	0.33	-1.4
6,811,284	+		Pf6N2E2_5995	0.33	+0.6
6,811,285	-		Pf6N2E2_5995	0.33	-0.4
6,811,285	-		Pf6N2E2_5995	0.33	-0.4
6,811,285	-		Pf6N2E2_5995	0.33	-0.4
6,811,285	-		Pf6N2E2_5995	0.33	+0.6
6,811,285	-		Pf6N2E2_5995	0.33	-0.4
6,811,285	-		Pf6N2E2_5995	0.33	-0.4
6,811,287	+		Pf6N2E2_5995	0.33	+0.6
6,811,287	+		Pf6N2E2_5995	0.33	-0.4
6,811,287	+		Pf6N2E2_5995	0.33	+0.6
6,811,287	+		Pf6N2E2_5995	0.33	-1.0
6,811,287	+		Pf6N2E2_5995	0.33	+0.6
6,811,287	+		Pf6N2E2_5995	0.33	+0.6
6,811,287	+		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	-0.4
6,811,288	-		Pf6N2E2_5995	0.33	-1.0
6,811,288	-		Pf6N2E2_5995	0.33	-1.3
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	-0.4
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	+0.6
6,811,288	-		Pf6N2E2_5995	0.33	-1.9
6,811,288	-		Pf6N2E2_5995	0.33	-0.6
6,811,288	-		Pf6N2E2_5995	0.33	-1.4
6,811,311	-		Pf6N2E2_5995	0.34	-1.0
6,811,311	-		Pf6N2E2_5995	0.34	-0.0
6,811,329	+		Pf6N2E2_5995	0.36	+0.6
6,811,329	+		Pf6N2E2_5995	0.36	-0.4
6,811,329	+		Pf6N2E2_5995	0.36	+0.6
6,811,329	+		Pf6N2E2_5995	0.36	+0.6
6,811,329	+				-0.4
6,811,330	-		Pf6N2E2_5995	0.36	+0.6
6,811,330	-		Pf6N2E2_5995	0.36	-1.0
6,811,401	-		Pf6N2E2_5995	0.41	+0.6
6,811,426	+		Pf6N2E2_5995	0.43	-0.6
6,811,427	-		Pf6N2E2_5995	0.43	+0.6