Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5042

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
5,817,812	+				+0.7
5,817,812	+				-1.6
5,817,812	+				+0.7
5,817,812	+				-2.2
5,817,813	-				+0.7
5,817,823	+				-0.5
5,817,824	-				-0.9
5,817,891	+				-1.6
5,817,891	+				-0.3
5,817,892	-				+0.7
5,817,892	-				-1.1
5,817,892	-				-1.3
5,817,892	-				+0.7
5,817,895	+				+0.1
5,817,896	-				+0.3
5,817,896	-				-0.3
5,817,907	+				+0.7
5,817,907	+				-0.3
5,817,907	+				+0.7
5,817,907	+				+0.7
5,817,908	-				+0.7
5,818,055	+		Pf6N2E2_5041	0.18	-0.7
5,818,056	-		Pf6N2E2_5041	0.18	+0.7
5,818,349	+		Pf6N2E2_5041	0.57	-0.9
5,818,349	+		Pf6N2E2_5041	0.57	-1.3
5,818,350	-		Pf6N2E2_5041	0.57	+0.7
5,818,586	+		Pf6N2E2_5041	0.89	-0.9
5,818,587	-		Pf6N2E2_5041	0.89	-1.8
5,818,587	-		Pf6N2E2_5041	0.89	-0.9
5,818,622	+				+0.7
5,818,623	-				-0.6
5,818,623	-				+0.7
5,818,711	-				-0.3
5,818,740	-				-0.0
5,818,740	-				+0.7
5,818,740	-				-0.1
5,818,837	+				+0.7
5,818,837	+				-0.9
5,818,838	-				-0.7
5,818,838	-				-0.3
5,818,840	+				-0.3
5,818,840	+				+0.7
5,818,840	+				-1.3
5,818,840	+				+0.7
5,818,841	-				-0.3
5,818,841	-				+0.7
5,818,841	-				+0.7
5,818,841	-				-0.8
5,818,841	-				-0.3
5,818,841	-				-0.1
5,818,841	-				+0.7
5,818,859	-		Pf6N2E2_5042	0.13	-0.3
5,818,876	+		Pf6N2E2_5042	0.16	+0.7
5,818,927	+		Pf6N2E2_5042	0.27	-0.4
5,818,927	+		Pf6N2E2_5042	0.27	-0.3
5,818,928	-		Pf6N2E2_5042	0.27	+0.7
5,818,928	-		Pf6N2E2_5042	0.27	+0.7
5,818,928	-		Pf6N2E2_5042	0.27	-0.9
5,818,928	-		Pf6N2E2_5042	0.27	-0.3
5,818,928	-		Pf6N2E2_5042	0.27	-0.3
5,818,928	-		Pf6N2E2_5042	0.27	+0.7
5,818,934	-		Pf6N2E2_5042	0.28	+0.7
5,819,017	+		Pf6N2E2_5042	0.46	-0.9
5,819,017	+		Pf6N2E2_5042	0.46	+0.7
5,819,017	+		Pf6N2E2_5042	0.46	+0.7
5,819,017	+		Pf6N2E2_5042	0.46	-0.5
5,819,017	+		Pf6N2E2_5042	0.46	-0.9
5,819,017	+		Pf6N2E2_5042	0.46	+0.7
5,819,018	-		Pf6N2E2_5042	0.46	-1.9
5,819,018	-		Pf6N2E2_5042	0.46	-0.3
5,819,018	-		Pf6N2E2_5042	0.46	-1.3
5,819,018	-		Pf6N2E2_5042	0.46	-1.3
5,819,018	-		Pf6N2E2_5042	0.46	-2.3
5,819,018	-				+0.7
5,819,188	+		Pf6N2E2_5042	0.81	-0.3
5,819,908	+				-1.1
5,819,908	+				-0.8
5,819,909	-				-0.3
5,819,909	-				+0.7
5,819,909	-				+0.7
5,820,081	+				-0.3
5,820,081	+				-0.3