Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4265

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
4,962,665	-		Pf6N2E2_4264	0.10	-1.5
4,962,861	+		Pf6N2E2_4264	0.40	+0.2
4,962,861	+		Pf6N2E2_4264	0.40	+0.8
4,962,862	-		Pf6N2E2_4264	0.40	+0.8
4,962,862	-		Pf6N2E2_4264	0.40	+0.8
4,962,913	+		Pf6N2E2_4264	0.48	-0.8
4,962,991	+		Pf6N2E2_4264	0.60	+0.8
4,963,014	+		Pf6N2E2_4264	0.64	+0.8
4,963,014	+		Pf6N2E2_4264	0.64	+0.8
4,963,014	+		Pf6N2E2_4264	0.64	+0.8
4,963,014	+		Pf6N2E2_4264	0.64	-0.2
4,963,014	+		Pf6N2E2_4264	0.64	-0.1
4,963,014	+		Pf6N2E2_4264	0.64	-1.0
4,963,015	-		Pf6N2E2_4264	0.64	+0.8
4,963,015	-		Pf6N2E2_4264	0.64	+0.8
4,963,015	-		Pf6N2E2_4264	0.64	-0.8
4,963,015	-		Pf6N2E2_4264	0.64	-0.2
4,963,142	+		Pf6N2E2_4264	0.83	-1.9
4,963,143	-		Pf6N2E2_4264	0.83	-0.8
4,963,228	+				-0.1
4,963,228	+				+0.8
4,963,228	+				-0.2
4,963,229	-				+0.8
4,963,229	-				+0.8
4,963,229	-				+0.8
4,963,248	+				+0.8
4,963,299	+		Pf6N2E2_4265	0.15	-0.8
4,963,326	+		Pf6N2E2_4265	0.22	+0.8
4,963,326	+		Pf6N2E2_4265	0.22	+0.0
4,963,326	+		Pf6N2E2_4265	0.22	-0.2
4,963,326	+		Pf6N2E2_4265	0.22	-0.2
4,963,327	-		Pf6N2E2_4265	0.23	-0.8
4,963,327	-		Pf6N2E2_4265	0.23	+0.3
4,963,351	+		Pf6N2E2_4265	0.29	+0.2
4,963,351	+		Pf6N2E2_4265	0.29	+0.5
4,963,351	+		Pf6N2E2_4265	0.29	-0.8
4,963,351	+		Pf6N2E2_4265	0.29	-0.2
4,963,352	-		Pf6N2E2_4265	0.30	-0.2
4,963,410	+		Pf6N2E2_4265	0.46	-0.3
4,963,410	+		Pf6N2E2_4265	0.46	-0.2
4,963,410	+		Pf6N2E2_4265	0.46	+0.8
4,963,410	+		Pf6N2E2_4265	0.46	+0.8
4,963,410	+		Pf6N2E2_4265	0.46	+0.2
4,963,411	-		Pf6N2E2_4265	0.46	-0.2
4,963,411	-		Pf6N2E2_4265	0.46	+0.8
4,963,411	-		Pf6N2E2_4265	0.46	-0.8
4,963,411	-		Pf6N2E2_4265	0.46	+0.6
4,963,411	-		Pf6N2E2_4265	0.46	-0.8
4,963,600	+				+0.8
4,963,600	+				-0.8
4,963,600	+				-0.8
4,963,601	-				-0.8
4,963,627	+				-0.4
4,963,627	+				-1.3
4,963,627	+				+0.8
4,963,627	+				+0.7
4,963,627	+				-0.2
4,963,627	+				+0.8
4,963,628	-				-0.8
4,963,628	-				-0.2
4,963,628	-				+0.2
4,963,801	+		Pf6N2E2_4266	0.18	+0.8
4,963,881	+		Pf6N2E2_4266	0.26	+0.1
4,963,882	-		Pf6N2E2_4266	0.26	-1.2
4,963,882	-		Pf6N2E2_4266	0.26	-0.8
4,963,882	-		Pf6N2E2_4266	0.26	+0.8
4,963,885	+		Pf6N2E2_4266	0.27	-1.4
4,963,886	-		Pf6N2E2_4266	0.27	-2.0
4,964,162	+		Pf6N2E2_4266	0.55	+0.8
4,964,163	-		Pf6N2E2_4266	0.55	+0.8
4,964,163	-		Pf6N2E2_4266	0.55	+0.8
4,964,163	-		Pf6N2E2_4266	0.55	+0.8
4,964,163	-		Pf6N2E2_4266	0.55	-0.4
4,964,163	-		Pf6N2E2_4266	0.55	-0.8
4,964,237	-		Pf6N2E2_4266	0.63	-0.3
4,964,247	+		Pf6N2E2_4266	0.64	+0.8
4,964,247	+		Pf6N2E2_4266	0.64	-0.2
4,964,248	-		Pf6N2E2_4266	0.64	-0.2
4,964,248	-		Pf6N2E2_4266	0.64	-0.2
4,964,309	+		Pf6N2E2_4266	0.70	-0.5
4,964,309	+		Pf6N2E2_4266	0.70	+0.8
4,964,309	+		Pf6N2E2_4266	0.70	+0.8
4,964,309	+		Pf6N2E2_4266	0.70	-0.2
4,964,309	+		Pf6N2E2_4266	0.70	-0.2
4,964,310	-		Pf6N2E2_4266	0.71	-0.8
4,964,310	-		Pf6N2E2_4266	0.71	-0.2
4,964,310	-		Pf6N2E2_4266	0.71	+1.6
4,964,310	-		Pf6N2E2_4266	0.71	-0.8
4,964,310	-		Pf6N2E2_4266	0.71	-0.2
4,964,310	-		Pf6N2E2_4266	0.71	+0.8
4,964,335	+		Pf6N2E2_4266	0.73	+0.8
4,964,336	-		Pf6N2E2_4266	0.73	-0.9
4,964,395	-		Pf6N2E2_4266	0.79	-0.2