Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4262

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
4,958,879	+		Pf6N2E2_4260	0.63	-0.2
4,958,880	-		Pf6N2E2_4260	0.63	-1.8
4,958,880	-		Pf6N2E2_4260	0.63	+0.8
4,958,880	-		Pf6N2E2_4260	0.63	-0.8
4,958,908	+		Pf6N2E2_4260	0.66	-0.5
4,958,909	-		Pf6N2E2_4260	0.66	-1.2
4,958,909	-		Pf6N2E2_4260	0.66	-0.2
4,959,279	-		Pf6N2E2_4261	0.13	-1.2
4,959,279	-		Pf6N2E2_4261	0.13	+0.8
4,959,279	-		Pf6N2E2_4261	0.13	-0.5
4,959,279	-		Pf6N2E2_4261	0.13	+0.8
4,959,298	-		Pf6N2E2_4261	0.15	-0.4
4,959,535	-		Pf6N2E2_4261	0.51	-0.8
4,959,546	+		Pf6N2E2_4261	0.52	-0.8
4,959,546	+		Pf6N2E2_4261	0.52	+0.8
4,959,546	+		Pf6N2E2_4261	0.52	-1.2
4,959,546	+		Pf6N2E2_4261	0.52	+0.4
4,959,546	+		Pf6N2E2_4261	0.52	-0.2
4,959,547	-		Pf6N2E2_4261	0.53	-0.2
4,959,547	-		Pf6N2E2_4261	0.53	-0.2
4,959,547	-		Pf6N2E2_4261	0.53	-0.2
4,959,547	-		Pf6N2E2_4261	0.53	+0.8
4,959,547	-		Pf6N2E2_4261	0.53	+0.8
4,959,554	+		Pf6N2E2_4261	0.54	+0.2
4,959,554	+		Pf6N2E2_4261	0.54	-1.2
4,959,554	+		Pf6N2E2_4261	0.54	-0.2
4,959,554	+		Pf6N2E2_4261	0.54	+0.8
4,959,554	+		Pf6N2E2_4261	0.54	-0.8
4,959,554	+		Pf6N2E2_4261	0.54	-0.4
4,959,555	-		Pf6N2E2_4261	0.54	+0.8
4,959,735	+		Pf6N2E2_4261	0.81	+0.8
4,959,736	-		Pf6N2E2_4261	0.81	+0.8
4,959,736	-		Pf6N2E2_4261	0.81	+0.8
4,959,935	+				-1.5
4,959,935	+				-0.2
4,959,935	+				-1.2
4,959,935	+				-0.2
4,959,936	-				-0.8
4,959,936	-				-0.2
4,960,148	+		Pf6N2E2_4262	0.35	-0.7
4,960,148	+		Pf6N2E2_4262	0.35	+0.8
4,960,148	+		Pf6N2E2_4262	0.35	+0.8
4,960,149	-		Pf6N2E2_4262	0.35	+0.8
4,960,149	-		Pf6N2E2_4262	0.35	-0.3
4,960,149	-		Pf6N2E2_4262	0.35	-0.5
4,960,149	-		Pf6N2E2_4262	0.35	+0.8
4,960,149	-		Pf6N2E2_4262	0.35	-0.6
4,960,178	-		Pf6N2E2_4262	0.39	+0.1
4,960,249	+		Pf6N2E2_4262	0.47	+0.8
4,960,323	+		Pf6N2E2_4262	0.56	+0.2
4,960,324	-		Pf6N2E2_4262	0.56	-0.2
4,960,367	+		Pf6N2E2_4262	0.61	-0.8
4,960,367	+		Pf6N2E2_4262	0.61	-0.2
4,960,368	-		Pf6N2E2_4262	0.62	-0.5
4,960,442	+		Pf6N2E2_4262	0.71	-0.2
4,960,442	+		Pf6N2E2_4262	0.71	+0.2
4,960,442	+		Pf6N2E2_4262	0.71	-0.6
4,960,442	+		Pf6N2E2_4262	0.71	-1.2
4,960,442	+		Pf6N2E2_4262	0.71	+0.2
4,960,442	+		Pf6N2E2_4262	0.71	-0.2
4,960,442	+		Pf6N2E2_4262	0.71	+0.8
4,960,442	+		Pf6N2E2_4262	0.71	+0.8
4,960,443	-		Pf6N2E2_4262	0.71	+0.8
4,960,450	+		Pf6N2E2_4262	0.72	-0.2
4,960,451	-		Pf6N2E2_4262	0.72	-0.2
4,960,451	-		Pf6N2E2_4262	0.72	-0.5
4,960,479	-		Pf6N2E2_4262	0.75	+0.8
4,960,523	+		Pf6N2E2_4262	0.80	-0.8
4,960,523	+		Pf6N2E2_4262	0.80	-0.2
4,960,569	+		Pf6N2E2_4262	0.86	-0.5
4,960,569	+		Pf6N2E2_4262	0.86	-0.2
4,960,569	+		Pf6N2E2_4262	0.86	-0.4
4,960,570	-		Pf6N2E2_4262	0.86	-0.2
4,960,570	-		Pf6N2E2_4262	0.86	-0.8
4,960,571	+		Pf6N2E2_4262	0.86	-0.8
4,960,572	-		Pf6N2E2_4262	0.86	-0.5
4,960,572	-		Pf6N2E2_4262	0.86	-0.2
4,960,572	-		Pf6N2E2_4262	0.86	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	-0.7
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	-0.3
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.7
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,582	+		Pf6N2E2_4262	0.88	-0.4
4,960,582	+		Pf6N2E2_4262	0.88	+0.8
4,960,582	+		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.8
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.3
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.8
4,960,583	-		Pf6N2E2_4262	0.88	+0.8
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	+0.8
4,960,583	-		Pf6N2E2_4262	0.88	+0.8
4,960,583	-		Pf6N2E2_4262	0.88	-1.8
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,583	-		Pf6N2E2_4262	0.88	-0.2
4,960,874	-				-0.2
4,960,913	+				-1.2
4,960,914	-				+0.2
4,960,914	-				+0.2
4,960,914	-				-1.2
4,960,914	-				-0.2
4,960,914	-				-0.2
4,961,091	+				+0.8
4,961,091	+				+0.8
4,961,092	-				+0.8
4,961,092	-				-1.2
4,961,092	-				-0.3
4,961,092	-				-0.7
4,961,095	+				+0.8
4,961,095	+				+0.8
4,961,095	+				+0.8
4,961,095	+				-0.8
4,961,095	+				-0.8
4,961,096	-				+0.8
4,961,096	-				-0.6
4,961,096	-				-0.8
4,961,096	-				-1.2
4,961,096	-				+0.8
4,961,096	-				-0.2
4,961,099	+				-0.8
4,961,099	+				-0.8
4,961,100	-				+0.8
4,961,124	-				-0.2
4,961,124	-				-0.8
4,961,125	+				+0.8
4,961,125	+				-0.2
4,961,125	+				-0.3
4,961,125	+				-0.2
4,961,125	+				-0.3
4,961,125	+				-1.0
4,961,125	+				+0.8
4,961,125	+				-1.0
4,961,125	+				-0.2
4,961,125	+				+0.8
4,961,125	+				+0.8
4,961,125	+				-0.2
4,961,126	-				-1.4
4,961,126	-				-0.8
4,961,126	-				-1.1
4,961,126	-				+0.8
4,961,126	-				+0.8
4,961,126	-				-0.8
4,961,126	-				+0.5
4,961,126	-				+0.8
4,961,169	-				+0.1
4,961,384	+				+0.8
4,961,384	+				+0.8
4,961,384	+				-0.2
4,961,384	+				-0.2
4,961,384	+				-0.2
4,961,385	-				+0.8
4,961,385	-				+0.8
4,961,385	-				+0.8
4,961,386	+				+0.8
4,961,386	+				-2.2
4,961,386	+				-1.5
4,961,386	+				+0.8
4,961,386	+				-0.8
4,961,386	+				+0.8
4,961,386	+				-0.2
4,961,386	+				-0.0
4,961,386	+				-0.8
4,961,386	+				-0.8
4,961,386	+				+0.8
4,961,386	+				+0.8
4,961,386	+				-0.2
4,961,386	+				-1.2
4,961,386	+				-1.2
4,961,386	+				-0.4
4,961,386	+				-1.2
4,961,387	-				-0.2
4,961,387	-				-0.6
4,961,387	-				-0.4
4,961,387	-				-0.2
4,961,387	-				-0.8
4,961,387	-				-0.2
4,961,387	-				+0.8
4,961,387	-				-1.5
4,961,387	-				-0.2
4,961,387	-				+0.2
4,961,487	-				-0.4
4,961,511	+				-0.8
4,961,511	+				+0.8
4,961,675	-		Pf6N2E2_4263	0.23	+0.8