Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3502

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
4,081,302	-				-0.3
4,081,302	-				+0.7
4,081,405	+				-0.6
4,081,406	-				+0.2
4,081,552	-		Pf6N2E2_3501	0.18	-0.6
4,081,598	+		Pf6N2E2_3501	0.23	+0.7
4,081,598	+		Pf6N2E2_3501	0.23	-0.3
4,081,598	+		Pf6N2E2_3501	0.23	-0.5
4,081,599	-		Pf6N2E2_3501	0.24	-0.8
4,081,599	-		Pf6N2E2_3501	0.24	-0.3
4,081,599	-		Pf6N2E2_3501	0.24	-0.1
4,081,602	+		Pf6N2E2_3501	0.24	-0.6
4,081,602	+		Pf6N2E2_3501	0.24	+0.7
4,081,602	+		Pf6N2E2_3501	0.24	-0.3
4,081,602	+		Pf6N2E2_3501	0.24	+0.7
4,081,602	+		Pf6N2E2_3501	0.24	+0.7
4,081,602	+		Pf6N2E2_3501	0.24	+0.7
4,081,603	-		Pf6N2E2_3501	0.24	-0.3
4,081,603	-		Pf6N2E2_3501	0.24	-1.4
4,081,850	+		Pf6N2E2_3501	0.55	+0.7
4,081,851	-		Pf6N2E2_3501	0.55	-2.0
4,081,851	-		Pf6N2E2_3501	0.55	-0.6
4,081,851	-		Pf6N2E2_3501	0.55	-0.8
4,081,862	+		Pf6N2E2_3501	0.57	-0.8
4,081,862	+		Pf6N2E2_3501	0.57	+0.7
4,081,863	-		Pf6N2E2_3501	0.57	-1.6
4,081,871	+		Pf6N2E2_3501	0.58	+0.7
4,081,871	+		Pf6N2E2_3501	0.58	-0.8
4,081,871	+		Pf6N2E2_3501	0.58	-0.3
4,081,872	-		Pf6N2E2_3501	0.58	+0.7
4,081,872	-		Pf6N2E2_3501	0.58	-0.5
4,081,872	-		Pf6N2E2_3501	0.58	-1.0
4,081,872	-		Pf6N2E2_3501	0.58	-0.3
4,081,872	-		Pf6N2E2_3501	0.58	-0.3
4,081,874	+		Pf6N2E2_3501	0.58	-0.8
4,081,874	+		Pf6N2E2_3501	0.58	-1.3
4,081,874	+		Pf6N2E2_3501	0.58	+0.7
4,081,875	-		Pf6N2E2_3501	0.58	-0.3
4,081,875	-		Pf6N2E2_3501	0.58	+0.7
4,081,875	-		Pf6N2E2_3501	0.58	-0.8
4,081,875	-		Pf6N2E2_3501	0.58	-0.7
4,081,875	-		Pf6N2E2_3501	0.58	-0.5
4,081,875	-		Pf6N2E2_3501	0.58	-0.6
4,081,875	-		Pf6N2E2_3501	0.58	-0.8
4,081,875	-		Pf6N2E2_3501	0.58	-0.7
4,082,155	+				-1.3
4,082,156	-				+0.7
4,082,403	+		Pf6N2E2_3502	0.19	+0.7
4,082,403	+		Pf6N2E2_3502	0.19	-0.3
4,082,403	+		Pf6N2E2_3502	0.19	+0.3
4,082,404	-		Pf6N2E2_3502	0.19	+0.7
4,082,404	-		Pf6N2E2_3502	0.19	+0.7
4,082,463	-		Pf6N2E2_3502	0.25	+0.7
4,082,573	-		Pf6N2E2_3502	0.35	-0.8
4,082,573	-		Pf6N2E2_3502	0.35	+0.7
4,082,573	-		Pf6N2E2_3502	0.35	-0.9
4,082,735	-		Pf6N2E2_3502	0.51	+0.1
4,082,936	-		Pf6N2E2_3502	0.70	+0.7
4,082,973	-		Pf6N2E2_3502	0.73	+0.7
4,083,042	+		Pf6N2E2_3502	0.80	+0.7
4,083,346	+		Pf6N2E2_3503	0.13	-0.4
4,083,346	+		Pf6N2E2_3503	0.13	-0.4
4,083,400	+		Pf6N2E2_3503	0.28	+0.7
4,083,400	+		Pf6N2E2_3503	0.28	+1.7
4,083,400	+		Pf6N2E2_3503	0.28	-2.1
4,083,401	-		Pf6N2E2_3503	0.29	+0.7
4,083,401	-		Pf6N2E2_3503	0.29	+0.7
4,083,401	-		Pf6N2E2_3503	0.29	+0.7
4,083,401	-		Pf6N2E2_3503	0.29	+0.7
4,083,472	-		Pf6N2E2_3503	0.49	-0.3
4,083,524	+		Pf6N2E2_3503	0.64	-0.6
4,083,569	+		Pf6N2E2_3503	0.77	-0.2
4,083,570	-		Pf6N2E2_3503	0.77	+0.1
4,083,570	-		Pf6N2E2_3503	0.77	-0.3
4,083,582	+		Pf6N2E2_3503	0.80	-0.8
4,083,582	+		Pf6N2E2_3503	0.80	+0.7
4,083,583	-		Pf6N2E2_3503	0.81	-0.3
4,083,583	-		Pf6N2E2_3503	0.81	+0.7
4,083,583	-		Pf6N2E2_3503	0.81	-0.3
4,083,583	-		Pf6N2E2_3503	0.81	-0.8
4,083,589	+		Pf6N2E2_3503	0.82	-0.7
4,083,590	-		Pf6N2E2_3503	0.83	-0.8
4,083,590	-		Pf6N2E2_3503	0.83	+0.7
4,083,602	-		Pf6N2E2_3503	0.86	+0.7
4,083,610	+		Pf6N2E2_3503	0.88	+0.7
4,083,611	-		Pf6N2E2_3503	0.89	+0.7
4,083,611	-		Pf6N2E2_3503	0.89	+0.7
4,083,627	-				-0.3
4,083,627	-				+0.7
4,083,640	+				-0.3
4,083,640	+				-0.3
4,083,640	+				-2.2
4,083,641	-				+0.7
4,083,648	+				-0.7
4,083,648	+				-0.3
4,083,663	+				-0.3
4,083,710	+				+2.3
4,083,710	+				+0.7
4,083,711	-				-0.3
4,083,740	+				-0.3
4,083,820	+				-1.6
4,084,025	+				+0.7
4,084,025	+				-0.3
4,084,073	+				+0.7
4,084,073	+				+0.7
4,084,097	+		Pf6N2E2_3504	0.11	+0.7
4,084,097	+		Pf6N2E2_3504	0.11	+0.7
4,084,097	+		Pf6N2E2_3504	0.11	+0.7
4,084,097	+		Pf6N2E2_3504	0.11	+0.7
4,084,187	+		Pf6N2E2_3504	0.16	+0.7
4,084,187	+		Pf6N2E2_3504	0.16	+0.7
4,084,187	+		Pf6N2E2_3504	0.16	+0.7
4,084,188	-		Pf6N2E2_3504	0.16	-0.8
4,084,250	+		Pf6N2E2_3504	0.19	-0.8
4,084,250	+		Pf6N2E2_3504	0.19	+0.7
4,084,251	-		Pf6N2E2_3504	0.19	-0.3