Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3172

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
3,666,529	-		Pf6N2E2_3170	0.82	+0.7
3,666,647	+		Pf6N2E2_3170	0.89	-1.0
3,666,647	+		Pf6N2E2_3170	0.89	-1.9
3,666,647	+		Pf6N2E2_3170	0.89	-1.0
3,666,648	-		Pf6N2E2_3170	0.89	-0.3
3,666,648	-		Pf6N2E2_3170	0.89	-0.7
3,666,695	+				+0.7
3,666,835	+				-1.5
3,666,835	+				-0.3
3,666,836	-				-0.6
3,666,836	-				-1.3
3,666,836	-				-0.3
3,666,836	-				+0.7
3,666,836	-				-0.9
3,666,912	+				+0.7
3,666,912	+				-0.3
3,666,912	+				+0.7
3,666,913	-				-1.0
3,667,389	+		Pf6N2E2_3171	0.87	-0.9
3,667,414	+				+0.7
3,667,414	+				-1.3
3,667,431	+				+0.7
3,667,432	-				-0.3
3,667,440	+				+0.7
3,667,559	+				-2.3
3,667,667	+		Pf6N2E2_3172	0.21	-2.7
3,667,667	+		Pf6N2E2_3172	0.21	-1.8
3,667,668	-		Pf6N2E2_3172	0.21	+0.7
3,667,715	+		Pf6N2E2_3172	0.27	-0.3
3,667,716	-		Pf6N2E2_3172	0.27	+0.7
3,667,793	+		Pf6N2E2_3172	0.36	-1.2
3,667,793	+		Pf6N2E2_3172	0.36	+0.7
3,667,793	+		Pf6N2E2_3172	0.36	-1.9
3,667,793	+		Pf6N2E2_3172	0.36	+0.7
3,667,793	+		Pf6N2E2_3172	0.36	+0.7
3,667,794	-		Pf6N2E2_3172	0.36	-0.9
3,667,794	-		Pf6N2E2_3172	0.36	-0.3
3,667,794	-		Pf6N2E2_3172	0.36	-0.6
3,667,794	-		Pf6N2E2_3172	0.36	-1.3
3,667,794	-		Pf6N2E2_3172	0.36	-1.2
3,667,794	-		Pf6N2E2_3172	0.36	+0.7
3,667,795	+		Pf6N2E2_3172	0.37	+0.7
3,667,795	+		Pf6N2E2_3172	0.37	-0.3
3,667,796	-		Pf6N2E2_3172	0.37	-1.8
3,667,796	-		Pf6N2E2_3172	0.37	+0.7
3,667,851	-		Pf6N2E2_3172	0.44	-0.9
3,667,916	+		Pf6N2E2_3172	0.52	-0.3
3,667,917	-		Pf6N2E2_3172	0.52	-0.3
3,667,961	+		Pf6N2E2_3172	0.57	+0.7
3,667,962	-		Pf6N2E2_3172	0.58	-0.3
3,667,962	-		Pf6N2E2_3172	0.58	-0.9
3,667,962	-		Pf6N2E2_3172	0.58	+0.7
3,668,298	+				-0.3
3,668,298	+				+0.3
3,668,299	-				-0.9
3,668,299	-				+0.7
3,668,299	-				-0.3
3,668,383	+				+0.7
3,668,384	-				+1.7
3,668,384	-				+0.7
3,668,476	+		Pf6N2E2_3173	0.17	+0.7
3,668,494	+		Pf6N2E2_3173	0.18	+0.7
3,668,494	+		Pf6N2E2_3173	0.18	-1.0
3,668,495	-		Pf6N2E2_3173	0.18	+0.7
3,668,495	-		Pf6N2E2_3173	0.18	-0.3
3,668,495	-		Pf6N2E2_3173	0.18	-0.3
3,668,569	+		Pf6N2E2_3173	0.25	-0.9
3,668,570	-		Pf6N2E2_3173	0.25	+0.7
3,668,570	-		Pf6N2E2_3173	0.25	+0.7
3,668,614	+		Pf6N2E2_3173	0.29	-1.3
3,668,614	+		Pf6N2E2_3173	0.29	+0.7
3,668,614	+		Pf6N2E2_3173	0.29	-1.3
3,668,615	-		Pf6N2E2_3173	0.29	-0.9
3,668,615	-		Pf6N2E2_3173	0.29	-0.9
3,668,629	+		Pf6N2E2_3173	0.30	+0.7
3,668,629	+		Pf6N2E2_3173	0.30	-0.3
3,668,662	+		Pf6N2E2_3173	0.33	-0.9
3,668,662	+		Pf6N2E2_3173	0.33	-0.9
3,668,662	+		Pf6N2E2_3173	0.33	-0.3
3,668,662	+		Pf6N2E2_3173	0.33	-0.9
3,668,663	-		Pf6N2E2_3173	0.33	-0.3
3,668,663	-		Pf6N2E2_3173	0.33	-0.9
3,668,663	-		Pf6N2E2_3173	0.33	-0.5
3,668,663	-		Pf6N2E2_3173	0.33	+0.1
3,668,670	+		Pf6N2E2_3173	0.33	-0.9
3,668,670	+		Pf6N2E2_3173	0.33	-0.3
3,668,670	+		Pf6N2E2_3173	0.33	+0.7
3,668,670	+		Pf6N2E2_3173	0.33	-0.3
3,668,670	+		Pf6N2E2_3173	0.33	+0.7
3,668,671	-		Pf6N2E2_3173	0.34	+0.7
3,668,740	+		Pf6N2E2_3173	0.40	-1.3
3,668,741	-		Pf6N2E2_3173	0.40	+0.7
3,668,741	-		Pf6N2E2_3173	0.40	-0.3
3,668,741	-		Pf6N2E2_3173	0.40	-1.3
3,668,839	+		Pf6N2E2_3173	0.48	+0.7
3,668,860	+		Pf6N2E2_3173	0.50	+0.7
3,668,860	+		Pf6N2E2_3173	0.50	+1.3
3,668,860	+		Pf6N2E2_3173	0.50	+0.7
3,668,860	+		Pf6N2E2_3173	0.50	-1.5
3,668,861	-		Pf6N2E2_3173	0.50	-0.3
3,668,861	-		Pf6N2E2_3173	0.50	+0.7
3,668,861	-		Pf6N2E2_3173	0.50	+0.7
3,668,861	-		Pf6N2E2_3173	0.50	-0.3
3,668,861	-		Pf6N2E2_3173	0.50	+0.3
3,668,861	-				-0.8
3,669,070	+		Pf6N2E2_3173	0.68	+0.7
3,669,070	+		Pf6N2E2_3173	0.68	-0.2
3,669,070	+		Pf6N2E2_3173	0.68	+0.7
3,669,070	+		Pf6N2E2_3173	0.68	+0.7
3,669,070	+		Pf6N2E2_3173	0.68	+0.7
3,669,071	-		Pf6N2E2_3173	0.68	+1.7
3,669,071	-		Pf6N2E2_3173	0.68	+0.7
3,669,071	-		Pf6N2E2_3173	0.68	+0.7
3,669,071	-		Pf6N2E2_3173	0.68	+0.7
3,669,079	+		Pf6N2E2_3173	0.69	+0.7
3,669,079	+		Pf6N2E2_3173	0.69	+0.7
3,669,079	+		Pf6N2E2_3173	0.69	-1.7
3,669,080	-		Pf6N2E2_3173	0.69	-0.2
3,669,080	-		Pf6N2E2_3173	0.69	+0.7
3,669,080	-		Pf6N2E2_3173	0.69	+0.7
3,669,083	+		Pf6N2E2_3173	0.69	-0.3
3,669,083	+		Pf6N2E2_3173	0.69	-1.3
3,669,083	+		Pf6N2E2_3173	0.69	-0.9
3,669,084	-		Pf6N2E2_3173	0.69	+0.7
3,669,084	-		Pf6N2E2_3173	0.69	-0.3
3,669,203	-		Pf6N2E2_3173	0.80	-0.9
3,669,266	-		Pf6N2E2_3173	0.85	-0.9