Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1993

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,355,977	-				-0.5
2,356,088	+				+0.3
2,356,089	-				+0.5
2,356,162	-				+0.5
2,356,167	-				+0.5
2,356,167	-				+0.5
2,356,167	-				+0.5
2,356,167	-				+0.5
2,356,202	+				+0.5
2,356,232	-				+0.5
2,356,232	-				-1.1
2,356,326	-		Pf6N2E2_1991	0.39	-0.9
2,356,438	-				+0.5
2,356,439	+				+0.5
2,356,440	-				-1.1
2,356,440	-				+0.5
2,356,440	-				-1.5
2,356,464	-				+0.5
2,356,504	-				+0.5
2,356,511	+				+0.5
2,356,511	+				+0.5
2,356,512	-				+0.5
2,356,512	-				+0.5
2,356,512	-				-0.5
2,356,512	-				+0.5
2,356,568	+				+0.5
2,356,569	-				+0.5
2,356,579	-				+0.5
2,356,627	+		Pf6N2E2_1992	0.29	+0.5
2,357,283	+		Pf6N2E2_1993	0.28	+0.5
2,357,308	+		Pf6N2E2_1993	0.29	+0.5
2,357,309	-		Pf6N2E2_1993	0.29	-1.1
2,357,421	+		Pf6N2E2_1993	0.37	-1.1
2,357,508	+		Pf6N2E2_1993	0.43	-1.5
2,357,570	+		Pf6N2E2_1993	0.48	-1.6
2,357,570	+		Pf6N2E2_1993	0.48	-1.1
2,357,570	+		Pf6N2E2_1993	0.48	-0.5
2,357,573	-		Pf6N2E2_1993	0.48	-0.9
2,357,677	-		Pf6N2E2_1993	0.55	-0.1
2,357,749	+		Pf6N2E2_1993	0.60	-0.5
2,357,812	-		Pf6N2E2_1993	0.65	+0.5
2,357,975	+		Pf6N2E2_1993	0.76	-1.7
2,358,054	-		Pf6N2E2_1993	0.82	-0.5
2,358,167	+		Pf6N2E2_1993	0.89	-1.2
2,358,192	-				+0.5
2,358,239	-				-0.5
2,358,534	-		Pf6N2E2_1994	0.53	+0.5
2,358,600	+		Pf6N2E2_1994	0.70	+0.5
2,358,600	+		Pf6N2E2_1994	0.70	-0.5
2,358,601	-		Pf6N2E2_1994	0.70	-2.1
2,358,648	+		Pf6N2E2_1994	0.82	+0.5
2,358,684	+				-0.5
2,358,714	+				-0.5
2,358,746	+				-0.5
2,358,746	+				-0.5
2,358,746	+				+0.5
2,358,746	+				+0.5
2,358,747	-				-1.1
2,358,747	-				+0.5
2,358,931	-				+0.5
2,359,111	-		Pf6N2E2_1995	0.14	+0.5
2,359,111	-		Pf6N2E2_1995	0.14	+0.5
2,359,111	-		Pf6N2E2_1995	0.14	-0.7
2,359,111	-		Pf6N2E2_1995	0.14	-0.5
2,359,113	-		Pf6N2E2_1995	0.14	+0.5
2,359,113	-		Pf6N2E2_1995	0.14	-0.5
2,359,113	-		Pf6N2E2_1995	0.14	+0.5
2,359,113	-		Pf6N2E2_1995	0.14	-2.0
2,359,151	-		Pf6N2E2_1995	0.15	+0.5
2,359,164	-		Pf6N2E2_1995	0.16	-1.1
2,359,206	-		Pf6N2E2_1995	0.17	+0.5
2,359,210	-		Pf6N2E2_1995	0.17	+0.5