Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4774

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
5,513,578	+		Pf6N2E2_4772	0.36	-0.8
5,513,578	+		Pf6N2E2_4772	0.36	-0.3
5,513,578	+		Pf6N2E2_4772	0.36	-0.3
5,513,578	+		Pf6N2E2_4772	0.36	+0.7
5,513,578	+		Pf6N2E2_4772	0.36	+0.7
5,513,578	+		Pf6N2E2_4772	0.36	-0.3
5,513,667	+		Pf6N2E2_4772	0.44	-0.7
5,513,722	+		Pf6N2E2_4772	0.48	-1.1
5,513,722	+		Pf6N2E2_4772	0.48	+0.7
5,514,028	+		Pf6N2E2_4772	0.74	+0.7
5,514,028	+		Pf6N2E2_4772	0.74	+0.7
5,514,028	+		Pf6N2E2_4772	0.74	-1.4
5,514,029	-		Pf6N2E2_4772	0.75	-1.0
5,514,029	-		Pf6N2E2_4772	0.75	-0.3
5,514,029	-		Pf6N2E2_4772	0.75	-0.3
5,514,029	-		Pf6N2E2_4772	0.75	-0.3
5,514,029	-		Pf6N2E2_4772	0.75	-0.6
5,514,208	+		Pf6N2E2_4772	0.90	-0.3
5,514,232	+				-0.3
5,514,233	-				+0.7
5,514,486	-		Pf6N2E2_4773	0.68	-1.7
5,514,573	+				-0.8
5,514,573	+				-0.3
5,514,573	+				-1.3
5,514,573	+				-0.8
5,514,573	+				+0.7
5,514,574	-				-0.3
5,514,574	-				+0.7
5,514,574	-				-0.8
5,514,574	-				-0.3
5,514,574	-				-0.3
5,514,578	+				+0.7
5,514,578	+				-1.3
5,514,579	-				+0.7
5,514,619	+				-0.3
5,514,641	-				-1.2
5,514,733	+		Pf6N2E2_4774	0.22	-1.6
5,514,733	+		Pf6N2E2_4774	0.22	-1.0
5,514,734	-		Pf6N2E2_4774	0.22	-1.2
5,514,802	+		Pf6N2E2_4774	0.31	+0.8
5,514,802	+		Pf6N2E2_4774	0.31	+0.8
5,514,803	-		Pf6N2E2_4774	0.31	-0.5
5,514,803	-		Pf6N2E2_4774	0.31	+0.8
5,514,944	-		Pf6N2E2_4774	0.50	-0.6
5,515,158	-		Pf6N2E2_4774	0.78	+0.8
5,515,168	+		Pf6N2E2_4774	0.79	+0.8
5,515,168	+		Pf6N2E2_4774	0.79	-0.2
5,515,225	+		Pf6N2E2_4774	0.87	+0.8
5,515,225	+		Pf6N2E2_4774	0.87	-0.2
5,515,225	+		Pf6N2E2_4774	0.87	-1.5
5,515,225	+		Pf6N2E2_4774	0.87	-1.2
5,515,225	+		Pf6N2E2_4774	0.87	-1.5
5,515,225	+		Pf6N2E2_4774	0.87	-0.8
5,515,225	+		Pf6N2E2_4774	0.87	-0.8
5,515,225	+		Pf6N2E2_4774	0.87	+0.8
5,515,225	+		Pf6N2E2_4774	0.87	-0.2
5,515,226	-		Pf6N2E2_4774	0.87	-2.6
5,515,226	-		Pf6N2E2_4774	0.87	+0.8
5,515,226	-		Pf6N2E2_4774	0.87	+0.8
5,515,226	-		Pf6N2E2_4774	0.87	+0.8
5,515,226	-		Pf6N2E2_4774	0.87	+0.1
5,515,226	-		Pf6N2E2_4774	0.87	-0.8
5,515,226	-		Pf6N2E2_4774	0.87	-1.3
5,515,226	-		Pf6N2E2_4774	0.87	+0.8
5,515,226	-		Pf6N2E2_4774	0.87	-2.4
5,515,241	-		Pf6N2E2_4774	0.89	-0.2
5,515,262	-				-0.8
5,515,262	-				-0.8
5,515,262	-				-1.1
5,515,262	-				-1.2
5,515,262	-				-0.2
5,515,360	-				+0.8
5,515,360	-				-0.2
5,515,439	-		Pf6N2E2_4775	0.12	+0.7
5,515,445	-		Pf6N2E2_4775	0.12	-0.3
5,515,445	-		Pf6N2E2_4775	0.12	-1.8
5,515,582	+		Pf6N2E2_4775	0.27	-1.6
5,515,582	+		Pf6N2E2_4775	0.27	+0.7
5,515,582	+		Pf6N2E2_4775	0.27	-1.6
5,515,659	+		Pf6N2E2_4775	0.36	-0.3
5,515,659	+		Pf6N2E2_4775	0.36	+0.7
5,515,659	+		Pf6N2E2_4775	0.36	-0.3
5,515,660	-		Pf6N2E2_4775	0.36	-0.3
5,515,660	-		Pf6N2E2_4775	0.36	-3.0
5,515,660	-		Pf6N2E2_4775	0.36	+0.7
5,515,660	-		Pf6N2E2_4775	0.36	+0.7
5,515,660	-		Pf6N2E2_4775	0.36	+0.7
5,515,660	-		Pf6N2E2_4775	0.36	-1.1
5,515,660	-		Pf6N2E2_4775	0.36	+0.7
5,516,228	+				+0.7
5,516,228	+				+0.7
5,516,228	+				-0.3
5,516,228	+				+0.7
5,516,229	-				+0.7
5,516,229	-				-0.3
5,516,229	-				-1.6
5,516,271	-				+0.7
5,516,297	-				-0.3
5,516,297	-				-0.8