Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3732

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
4,344,151	-		Pf6N2E2_3731	0.45	-0.3
4,344,151	-		Pf6N2E2_3731	0.45	-0.3
4,344,151	-		Pf6N2E2_3731	0.45	-0.3
4,344,182	+		Pf6N2E2_3731	0.51	+0.7
4,344,248	-		Pf6N2E2_3731	0.63	+0.7
4,344,280	-		Pf6N2E2_3731	0.69	+0.7
4,344,328	+		Pf6N2E2_3731	0.79	-0.3
4,344,328	+		Pf6N2E2_3731	0.79	-0.9
4,344,329	-		Pf6N2E2_3731	0.79	+0.7
4,344,378	+		Pf6N2E2_3731	0.88	-0.9
4,344,378	+		Pf6N2E2_3731	0.88	-0.3
4,344,378	+		Pf6N2E2_3731	0.88	-0.1
4,344,402	+				+0.7
4,344,435	+				+0.7
4,344,436	-				-0.2
4,344,535	+				-1.3
4,344,535	+				-0.9
4,344,535	+				+0.7
4,344,592	+				-0.3
4,344,789	+				+0.7
4,344,826	-				-0.3
4,344,841	+				-0.3
4,344,841	+				-0.9
4,344,841	+				-0.2
4,344,842	-				+0.1
4,344,919	+				-0.3
4,344,919	+				-0.9
4,344,920	-				-0.3
4,344,952	+				+0.7
4,344,953	-				-0.3
4,344,953	-				+0.7
4,344,953	-				-0.3
4,344,962	+				-0.6
4,344,962	+				-1.5
4,344,962	+				-0.9
4,344,962	+				+0.7
4,344,963	-				-1.0
4,344,970	+				-0.9
4,344,971	-				+0.5
4,344,996	+				-1.1
4,344,996	+				-0.3
4,344,996	+				-0.3
4,344,997	-				+0.7
4,344,997	-				+0.7
4,345,002	+				-1.3
4,345,026	+				+0.7
4,345,026	+				-0.2
4,345,026	+				-0.9
4,345,027	-				-0.8
4,345,031	+				-1.2
4,345,031	+				-0.6
4,345,031	+				+0.4
4,345,031	+				-0.9
4,345,031	+				-0.9
4,345,031	+				-0.3
4,345,031	+				-1.6
4,345,031	+				-0.9
4,345,031	+				+0.7
4,345,031	+				-1.3
4,345,032	-				-0.4
4,345,032	-				-0.9
4,345,032	-				+0.7
4,345,032	-				+0.7
4,345,032	-				+0.1
4,345,032	-				+0.7
4,345,033	+				+0.7
4,345,034	-				-1.3
4,345,103	-				+0.7
4,345,133	+				+1.3
4,345,133	+				-1.3
4,345,134	-				-2.4
4,345,134	-				+0.7
4,345,134	-				+0.7
4,345,134	-				-0.3
4,345,176	-		Pf6N2E2_3732	0.15	+0.7
4,345,197	-		Pf6N2E2_3732	0.18	+0.7
4,345,245	-		Pf6N2E2_3732	0.24	-0.3
4,345,259	+		Pf6N2E2_3732	0.26	-0.9
4,345,259	+		Pf6N2E2_3732	0.26	-1.3
4,345,260	-		Pf6N2E2_3732	0.26	-0.3
4,345,283	-		Pf6N2E2_3732	0.29	-0.3
4,345,331	+		Pf6N2E2_3732	0.35	+0.7
4,345,331	+		Pf6N2E2_3732	0.35	-0.3
4,345,331	+		Pf6N2E2_3732	0.35	+0.7
4,345,332	-		Pf6N2E2_3732	0.35	+0.7
4,345,386	-		Pf6N2E2_3732	0.42	+0.7
4,345,563	+		Pf6N2E2_3732	0.64	+3.1
4,345,564	-		Pf6N2E2_3732	0.64	+0.7
4,345,706	+		Pf6N2E2_3732	0.82	-0.9
4,345,709	-		Pf6N2E2_3732	0.83	+0.7
4,345,730	+		Pf6N2E2_3732	0.85	-0.8
4,345,746	+		Pf6N2E2_3732	0.87	-0.3
4,345,747	-		Pf6N2E2_3732	0.88	+0.7
4,345,754	+		Pf6N2E2_3732	0.88	-0.3
4,345,755	-		Pf6N2E2_3732	0.89	-1.4
4,345,755	-		Pf6N2E2_3732	0.89	+0.7
4,345,755	-		Pf6N2E2_3732	0.89	-0.9
4,345,835	+				+0.7
4,345,899	+				-0.3
4,345,900	-				-0.3
4,345,900	-				+0.7
4,345,904	-				+1.1
4,345,946	-				+0.7
4,345,946	-				+0.7
4,345,949	+				-0.3
4,345,949	+				-0.6
4,345,949	+				+0.7
4,345,949	+				-2.7
4,345,949	+				+0.7
4,345,949	+				+0.7
4,345,949	+				+0.7
4,345,949	+				+0.7
4,345,949	+				+0.2
4,345,949	+				-0.3
4,345,949	+				-0.9
4,345,949	+				+0.7
4,345,949	+				-0.3
4,345,949	+				+0.7
4,345,949	+				-1.3
4,345,949	+				-0.3
4,345,950	-				+0.7
4,345,950	-				+0.7
4,345,950	-				-0.4
4,345,950	-				+0.7
4,345,950	-				-0.9
4,345,950	-				-0.3
4,345,950	-				-0.3
4,345,950	-				+0.7
4,345,951	+				+0.7
4,345,951	+				-0.3
4,345,951	+				+0.7
4,345,953	+				-0.1
4,345,953	+				-0.6
4,345,953	+				-0.3
4,345,954	-				-0.3
4,345,954	-				-0.3
4,345,954	-				+0.7
4,345,980	+				+0.7
4,345,980	+				+0.7
4,345,981	-				-0.9
4,345,981	-				-0.3
4,345,981	-				-0.3
4,345,981	-				-1.2
4,345,981	-				-0.3
4,345,981	-				-0.3
4,346,037	-				+0.1
4,346,037	-				+0.7
4,346,060	+				-0.2
4,346,060	+				-1.6
4,346,061	-				-2.1
4,346,061	-				+0.7
4,346,204	+				-1.2
4,346,367	+				-0.3
4,346,367	+				-0.3
4,346,367	+				-0.3
4,346,367	+				+0.7
4,346,367	+				-0.5
4,346,368	-				-0.9
4,346,369	+				-0.9
4,346,369	+				+0.7
4,346,369	+				-0.3
4,346,369	+				+1.7
4,346,369	+				-0.5
4,346,369	+				+0.3
4,346,370	-				+0.7
4,346,370	-				-0.7
4,346,370	-				-0.3
4,346,370	-				-1.3
4,346,370	-				-0.9
4,346,370	-				+0.7
4,346,370	-				+0.7
4,346,370	-				+0.7
4,346,370	-				+0.7
4,346,370	-				-1.3
4,346,370	-				-0.7
4,346,370	-				+0.9
4,346,421	+				-0.9
4,346,421	+				+0.7
4,346,456	+		Pf6N2E2_3733	0.11	+0.1
4,346,456	+		Pf6N2E2_3733	0.11	-1.3
4,346,456	+		Pf6N2E2_3733	0.11	-0.6
4,346,476	+		Pf6N2E2_3733	0.11	+0.7
4,346,722	+		Pf6N2E2_3733	0.17	+0.7
4,346,722	+		Pf6N2E2_3733	0.17	-0.6
4,346,733	+		Pf6N2E2_3733	0.18	+0.7
4,346,733	+		Pf6N2E2_3733	0.18	-0.4
4,346,733	+		Pf6N2E2_3733	0.18	-0.9
4,346,830	+		Pf6N2E2_3733	0.20	+0.7
4,346,830	+		Pf6N2E2_3733	0.20	+0.7
4,346,831	-		Pf6N2E2_3733	0.20	-0.5
4,346,831	-		Pf6N2E2_3733	0.20	+0.7
4,346,831	-		Pf6N2E2_3733	0.20	-0.9