Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28190

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
6,277,409	+				+2.7
6,277,410	-				+1.0
6,277,410	-				+0.6
6,277,410	-				-0.2
6,277,410	-				-0.4
6,277,410	-				-0.3
6,277,410	-				-0.9
6,277,410	-				+2.2
6,277,513	+				-1.2
6,277,513	+				-1.2
6,277,513	+				-0.4
6,277,513	+				-0.5
6,277,513	+				-2.3
6,277,513	+				+3.0
6,277,513	+				-0.4
6,277,513	+				-0.1
6,277,513	+				+0.1
6,277,514	-				+0.3
6,277,514	-				-1.6
6,277,514	-				-0.4
6,277,514	-				-1.2
6,277,514	-				-1.7
6,277,514	-				-0.5
6,277,519	+				+1.9
6,277,519	+				-1.6
6,277,520	-				-0.7
6,277,584	+				-2.2
6,277,584	+				+2.6
6,277,584	+				-1.0
6,277,584	+				-1.0
6,277,584	+				-0.2
6,277,584	+				+1.5
6,277,584	+				-0.9
6,277,584	+				+2.6
6,277,584	+				-0.8
6,277,585	-				-1.5
6,277,585	-				-2.4
6,277,585	-				-0.1
6,277,585	-				+1.6
6,277,585	-				+1.5
6,277,585	-				-2.6
6,277,585	-				+1.6
6,277,585	-				-1.5
6,277,585	-				-0.0
6,277,585	-				-0.9
6,277,585	-				+0.1
6,277,585	-				+2.5
6,277,585	-				-0.9
6,277,793	+		PFLU_RS28185	0.36	-1.0
6,277,794	-		PFLU_RS28185	0.36	-1.5
6,277,823	-		PFLU_RS28185	0.41	-2.1
6,277,987	+		PFLU_RS28185	0.70	-0.5
6,277,987	+		PFLU_RS28185	0.70	-0.5
6,277,987	+		PFLU_RS28185	0.70	-1.5
6,277,987	+		PFLU_RS28185	0.70	+0.8
6,277,987	+		PFLU_RS28185	0.70	-0.7
6,277,988	-		PFLU_RS28185	0.70	-0.5
6,277,988	-		PFLU_RS28185	0.70	-0.8
6,277,988	-		PFLU_RS28185	0.70	+2.6
6,277,988	-		PFLU_RS28185	0.70	+1.7
6,277,988	-		PFLU_RS28185	0.70	-1.6
6,277,988	-		PFLU_RS28185	0.70	-1.7
6,278,008	+		PFLU_RS28185	0.73	+2.3
6,278,009	-		PFLU_RS28185	0.74	-2.0
6,278,009	-		PFLU_RS28185	0.74	-0.0
6,278,019	+		PFLU_RS28185	0.75	+0.9
6,278,019	+		PFLU_RS28185	0.75	+1.2
6,278,019	+		PFLU_RS28185	0.75	+1.4
6,278,019	+		PFLU_RS28185	0.75	-2.9
6,278,019	+		PFLU_RS28185	0.75	+0.5
6,278,019	+		PFLU_RS28185	0.75	-1.6
6,278,019	+		PFLU_RS28185	0.75	-0.2
6,278,019	+		PFLU_RS28185	0.75	-0.5
6,278,019	+		PFLU_RS28185	0.75	-1.9
6,278,019	+		PFLU_RS28185	0.75	-1.5
6,278,019	+		PFLU_RS28185	0.75	-3.9
6,278,019	+		PFLU_RS28185	0.75	-0.8
6,278,019	+		PFLU_RS28185	0.75	+1.1
6,278,019	+		PFLU_RS28185	0.75	+1.7
6,278,019	+		PFLU_RS28185	0.75	-1.0
6,278,019	+		PFLU_RS28185	0.75	-0.0
6,278,019	+		PFLU_RS28185	0.75	-2.0
6,278,019	+		PFLU_RS28185	0.75	-1.7
6,278,019	+		PFLU_RS28185	0.75	+0.9
6,278,020	-		PFLU_RS28185	0.75	+0.8
6,278,020	-		PFLU_RS28185	0.75	-0.2
6,278,020	-		PFLU_RS28185	0.75	+2.4
6,278,020	-		PFLU_RS28185	0.75	-1.0
6,278,020	-		PFLU_RS28185	0.75	-2.6
6,278,020	-		PFLU_RS28185	0.75	+0.7
6,278,020	-		PFLU_RS28185	0.75	-2.6
6,278,020	-		PFLU_RS28185	0.75	-1.6
6,278,020	-		PFLU_RS28185	0.75	+2.5
6,278,020	-		PFLU_RS28185	0.75	-0.4
6,278,020	-		PFLU_RS28185	0.75	-2.1
6,278,020	-		PFLU_RS28185	0.75	+0.8
6,278,025	+		PFLU_RS28185	0.76	-2.2
6,278,025	+		PFLU_RS28185	0.76	+1.4
6,278,085	+		PFLU_RS28185	0.87	+1.4
6,278,085	+		PFLU_RS28185	0.87	+2.6
6,278,085	+		PFLU_RS28185	0.87	+0.3
6,278,085	+		PFLU_RS28185	0.87	-1.6
6,278,085	+		PFLU_RS28185	0.87	-0.9
6,278,085	+		PFLU_RS28185	0.87	-1.7
6,278,086	-		PFLU_RS28185	0.87	+0.2
6,278,086	-		PFLU_RS28185	0.87	-0.6
6,278,086	-		PFLU_RS28185	0.87	-2.3
6,278,086	-		PFLU_RS28185	0.87	-1.1
6,278,086	-		PFLU_RS28185	0.87	+1.4
6,278,126	-				+1.0
6,278,168	+				+0.9
6,278,168	+				+4.3
6,278,168	+				-1.5
6,278,168	+				-0.9
6,278,168	+				-1.8
6,278,168	+				-1.5
6,278,168	+				+2.2
6,278,169	-				+1.8
6,278,169	-				+1.5
6,278,169	-				+2.8
6,278,169	-				+0.0
6,278,169	-				+1.5
6,278,220	+				-1.9
6,278,221	-				+0.2
6,278,241	+				+0.3
6,278,241	+				+1.6
6,278,242	-				+2.2
6,278,242	-				-1.5
6,278,306	+		PFLU_RS28190	0.20	-2.1
6,278,306	+		PFLU_RS28190	0.20	+1.2
6,278,306	+		PFLU_RS28190	0.20	+1.9
6,278,306	+		PFLU_RS28190	0.20	-1.3
6,278,306	+		PFLU_RS28190	0.20	-3.4
6,278,307	-		PFLU_RS28190	0.20	-0.2
6,278,307	-		PFLU_RS28190	0.20	+0.8
6,278,345	-		PFLU_RS28190	0.27	+0.9
6,278,453	+		PFLU_RS28190	0.47	-1.9
6,278,454	-		PFLU_RS28190	0.47	+1.9
6,278,501	+		PFLU_RS28190	0.56	-1.4
6,278,501	+		PFLU_RS28190	0.56	+0.9
6,278,501	+		PFLU_RS28190	0.56	+1.5
6,278,501	+		PFLU_RS28190	0.56	+2.4
6,278,502	-		PFLU_RS28190	0.56	+1.5
6,278,502	-		PFLU_RS28190	0.56	+0.4
6,278,502	-		PFLU_RS28190	0.56	-2.3
6,278,502	-		PFLU_RS28190	0.56	-1.3
6,278,502	-		PFLU_RS28190	0.56	-1.9
6,278,502	-		PFLU_RS28190	0.56	+1.0
6,278,502	-		PFLU_RS28190	0.56	+1.5
6,278,530	+		PFLU_RS28190	0.61	-1.2
6,278,531	-		PFLU_RS28190	0.61	+3.3
6,278,624	+		PFLU_RS28190	0.78	+1.8
6,278,624	+		PFLU_RS28190	0.78	-1.7
6,278,624	+		PFLU_RS28190	0.78	+0.0
6,278,624	+		PFLU_RS28190	0.78	+1.2
6,278,624	+		PFLU_RS28190	0.78	-1.6
6,278,624	+		PFLU_RS28190	0.78	+1.7
6,278,625	-		PFLU_RS28190	0.78	-0.7
6,278,625	-		PFLU_RS28190	0.78	-1.6
6,278,625	-		PFLU_RS28190	0.78	+1.8
6,278,625	-		PFLU_RS28190	0.78	+2.5
6,278,625	-		PFLU_RS28190	0.78	-0.9
6,278,625	-		PFLU_RS28190	0.78	-1.0
6,278,625	-		PFLU_RS28190	0.78	-1.2
6,278,627	+		PFLU_RS28190	0.78	+4.6
6,278,628	-		PFLU_RS28190	0.79	+0.5
6,278,628	-		PFLU_RS28190	0.79	+0.4
6,278,717	+				+0.5
6,278,718	-				+0.5
6,278,733	+				-0.9
6,278,733	+				-1.2
6,278,733	+				+0.2
6,278,734	-				+0.8
6,278,734	-				-2.4
6,278,734	-				-1.3
6,278,734	-				-1.5
6,278,734	-				-0.3
6,278,734	-				-1.4
6,278,734	-				+2.2
6,278,734	-				+0.8
6,278,734	-				-1.9
6,278,734	-				-0.7
6,278,737	+				-1.9
6,278,737	+				-0.3
6,278,737	+				-0.7
6,278,737	+				+2.2
6,278,737	+				-1.4
6,278,737	+				-0.6
6,278,738	-				-2.7
6,278,738	-				+1.0
6,278,760	-				+3.2
6,278,778	+				+0.8
6,278,786	+				+0.6
6,278,786	+				+0.9
6,278,786	+				-0.4
6,278,787	-				-1.4
6,278,787	-				-1.5
6,278,787	-				-1.5
6,278,787	-				-0.8
6,278,787	-				+1.7
6,278,790	+				-2.0
6,278,798	+				-0.6
6,278,799	-				-2.3
6,278,834	-				+1.5
6,278,847	+				-0.7
6,278,847	+				+0.6
6,278,848	-				+2.3
6,278,848	-				+1.6
6,278,856	+				+1.1
6,278,856	+				+0.2
6,278,856	+				+3.1
6,278,856	+				-0.7
6,278,856	+				-1.8
6,278,856	+				-1.8
6,278,856	+				-1.8
6,278,856	+				-0.5
6,278,856	+				-0.3
6,278,856	+				+3.0
6,278,856	+				-1.9
6,278,856	+				-2.5
6,278,857	-				+1.3
6,278,857	-				+2.1
6,278,857	-				-0.9
6,278,857	-				-0.0
6,278,857	-				+1.5
6,278,857	-				-0.9
6,278,857	-				+0.2
6,278,857	-				-2.1
6,278,857	-				+0.6
6,278,857	-				+0.9
6,278,861	+				-2.3
6,278,861	+				-1.7
6,278,861	+				-1.9
6,278,862	-				-0.7
6,278,862	-				+0.8
6,278,873	-				-0.4
6,278,873	-				-1.9
6,278,873	-				-2.1
6,278,879	+				-0.2
6,278,879	+				+2.9
6,278,879	+				-0.1
6,278,879	+				-1.5
6,278,879	+				+0.4
6,278,880	-				-0.7
6,278,880	-				-0.8
6,278,880	-				-0.5
6,278,880	-				+0.8
6,278,880	-				-1.0
6,278,880	-				+0.4
6,278,880	-				+2.3
6,278,880	-				-0.1
6,278,885	+				-2.1
6,278,885	+				-0.0
6,278,885	+				+0.3
6,278,886	-				-1.0
6,278,886	-				-1.2
6,278,933	+				+0.3
6,278,933	+				+2.3
6,278,933	+				+2.5
6,278,933	+				+2.7
6,278,933	+				+1.2
6,278,933	+				-0.9
6,278,933	+				-0.0
6,278,933	+				+2.7
6,278,933	+				+1.3
6,278,933	+				-1.2
6,278,933	+				-2.5
6,278,933	+				-1.3
6,278,933	+				-0.2
6,278,933	+				-1.1
6,278,933	+				+1.0
6,278,933	+				-1.2
6,278,933	+				+0.2
6,278,933	+				-2.0
6,278,933	+				+1.7
6,278,933	+				+0.6
6,278,933	+				-1.7
6,278,933	+				+1.2
6,278,933	+				+0.7
6,278,933	+				+0.7
6,278,933	+				-1.5
6,278,933	+				-1.8
6,278,933	+				+0.3
6,278,934	-				+1.7
6,278,934	-				-0.4
6,278,934	-				+2.1
6,278,934	-				-0.0
6,278,934	-				+0.1
6,278,934	-				-0.4
6,278,934	-				-0.9
6,278,934	-				-2.9
6,278,934	-				-2.1
6,278,934	-				+0.4
6,278,934	-				+4.3
6,278,934	-				+2.6
6,278,934	-				-0.4
6,278,934	-				+2.0
6,278,934	-				-1.2
6,278,934	-				+0.9
6,278,934	-				+2.6
6,278,934	-				+2.3
6,278,934	-				+1.0
6,278,934	-				+1.2
6,278,934	-				+3.2
6,278,960	+				-0.7
6,278,960	+				+1.5
6,278,960	+				-1.4
6,278,960	+				+2.9
6,278,961	-				-0.2
6,278,961	-				+1.1
6,278,961	-				+1.0
6,278,961	-				-0.5
6,278,961	-				-1.8
6,278,961	-				-1.2
6,278,961	-				-0.7
6,278,961	-				+0.1
6,278,961	-				-0.7
6,278,980	-				-1.8
6,278,980	-				+0.2
6,278,980	-				-1.4
6,278,980	-				-2.2
6,279,164	-		PFLU_RS28195	0.10	-2.3
6,279,353	-		PFLU_RS28195	0.24	-1.5
6,279,406	+		PFLU_RS28195	0.28	-0.0
6,279,407	-		PFLU_RS28195	0.28	-0.1
6,279,407	-		PFLU_RS28195	0.28	-2.4
6,279,463	+		PFLU_RS28195	0.32	-1.2
6,279,463	+		PFLU_RS28195	0.32	-0.9
6,279,463	+		PFLU_RS28195	0.32	+1.2
6,279,463	+		PFLU_RS28195	0.32	+2.1
6,279,463	+		PFLU_RS28195	0.32	-1.5
6,279,463	+		PFLU_RS28195	0.32	-1.8
6,279,463	+		PFLU_RS28195	0.32	-1.0
6,279,463	+		PFLU_RS28195	0.32	-0.5
6,279,464	-		PFLU_RS28195	0.32	-0.1
6,279,464	-		PFLU_RS28195	0.32	-1.4
6,279,464	-		PFLU_RS28195	0.32	-0.0
6,279,464	-		PFLU_RS28195	0.32	-1.8
6,279,464	-		PFLU_RS28195	0.32	+0.3
6,279,464	-		PFLU_RS28195	0.32	-1.1
6,279,523	+		PFLU_RS28195	0.36	-1.3
6,279,523	+		PFLU_RS28195	0.36	-2.2
6,279,523	+		PFLU_RS28195	0.36	-0.1
6,279,523	+		PFLU_RS28195	0.36	+1.2
6,279,523	+		PFLU_RS28195	0.36	+0.1
6,279,523	+		PFLU_RS28195	0.36	-2.1
6,279,523	+		PFLU_RS28195	0.36	-2.6
6,279,523	+		PFLU_RS28195	0.36	-2.8
6,279,524	-		PFLU_RS28195	0.36	+0.6
6,279,524	-		PFLU_RS28195	0.36	-0.3
6,279,524	-		PFLU_RS28195	0.36	+0.9
6,279,524	-		PFLU_RS28195	0.36	-3.5
6,279,524	-		PFLU_RS28195	0.36	+0.9
6,279,524	-		PFLU_RS28195	0.36	-0.4
6,279,524	-		PFLU_RS28195	0.36	-1.8
6,279,524	-		PFLU_RS28195	0.36	-2.5
6,279,524	-		PFLU_RS28195	0.36	+0.8
6,279,571	+		PFLU_RS28195	0.39	-1.8
6,279,572	-		PFLU_RS28195	0.39	-0.8
6,279,715	+		PFLU_RS28195	0.49	-2.4
6,279,715	+		PFLU_RS28195	0.49	-0.5
6,279,715	+		PFLU_RS28195	0.49	-2.7
6,279,715	+		PFLU_RS28195	0.49	-1.6
6,279,715	+		PFLU_RS28195	0.49	-1.0
6,279,715	+		PFLU_RS28195	0.49	+1.8
6,279,715	+		PFLU_RS28195	0.49	-1.2
6,279,715	+		PFLU_RS28195	0.49	-0.4
6,279,715	+		PFLU_RS28195	0.49	-0.9
6,279,715	+		PFLU_RS28195	0.49	-0.5
6,279,715	+		PFLU_RS28195	0.49	-0.8
6,279,716	-		PFLU_RS28195	0.50	-1.8
6,279,716	-		PFLU_RS28195	0.50	-2.2
6,279,716	-		PFLU_RS28195	0.50	-1.5
6,279,716	-		PFLU_RS28195	0.50	-0.8
6,279,716	-		PFLU_RS28195	0.50	-0.8
6,279,716	-		PFLU_RS28195	0.50	-2.6
6,279,716	-		PFLU_RS28195	0.50	-0.7