Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27855

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
6,198,976	-		PFLU_RS27850	0.31	-2.3
6,199,056	+		PFLU_RS27850	0.36	-0.3
6,199,056	+		PFLU_RS27850	0.36	-1.6
6,199,056	+		PFLU_RS27850	0.36	+0.7
6,199,056	+		PFLU_RS27850	0.36	-0.4
6,199,056	+		PFLU_RS27850	0.36	-0.2
6,199,056	+		PFLU_RS27850	0.36	+0.8
6,199,056	+		PFLU_RS27850	0.36	+2.1
6,199,056	+		PFLU_RS27850	0.36	+0.5
6,199,057	-		PFLU_RS27850	0.36	+0.5
6,199,057	-		PFLU_RS27850	0.36	-0.2
6,199,057	-		PFLU_RS27850	0.36	-1.2
6,199,057	-		PFLU_RS27850	0.36	+0.3
6,199,057	-		PFLU_RS27850	0.36	-1.7
6,199,057	-		PFLU_RS27850	0.36	+1.1
6,199,057	-		PFLU_RS27850	0.36	-1.9
6,199,057	-		PFLU_RS27850	0.36	-0.2
6,199,057	-		PFLU_RS27850	0.36	+2.3
6,199,197	+		PFLU_RS27850	0.46	-0.7
6,199,197	+		PFLU_RS27850	0.46	+0.3
6,199,197	+		PFLU_RS27850	0.46	-1.5
6,199,198	-		PFLU_RS27850	0.46	+0.8
6,199,198	-		PFLU_RS27850	0.46	+0.3
6,199,198	-		PFLU_RS27850	0.46	+2.0
6,199,206	+		PFLU_RS27850	0.46	-1.5
6,199,206	+		PFLU_RS27850	0.46	-1.2
6,199,206	+		PFLU_RS27850	0.46	+0.8
6,199,206	+		PFLU_RS27850	0.46	-0.5
6,199,207	-		PFLU_RS27850	0.47	-2.5
6,199,207	-		PFLU_RS27850	0.47	-0.8
6,199,207	-		PFLU_RS27850	0.47	+2.5
6,199,207	-		PFLU_RS27850	0.47	-0.2
6,199,207	-		PFLU_RS27850	0.47	-2.6
6,199,207	-		PFLU_RS27850	0.47	-0.7
6,199,207	-		PFLU_RS27850	0.47	+0.2
6,199,207	-		PFLU_RS27850	0.47	-0.7
6,199,207	-		PFLU_RS27850	0.47	+0.5
6,199,207	-		PFLU_RS27850	0.47	+0.9
6,199,218	+		PFLU_RS27850	0.47	+0.0
6,199,228	-		PFLU_RS27850	0.48	+2.6
6,199,272	+		PFLU_RS27850	0.51	-1.5
6,199,272	+		PFLU_RS27850	0.51	-0.8
6,199,272	+		PFLU_RS27850	0.51	+1.1
6,199,272	+		PFLU_RS27850	0.51	+4.0
6,199,272	+		PFLU_RS27850	0.51	+3.8
6,199,272	+		PFLU_RS27850	0.51	+0.2
6,199,272	+		PFLU_RS27850	0.51	-1.7
6,199,272	+		PFLU_RS27850	0.51	+0.2
6,199,272	+		PFLU_RS27850	0.51	+3.7
6,199,272	+		PFLU_RS27850	0.51	-0.7
6,199,273	-		PFLU_RS27850	0.51	+1.1
6,199,273	-		PFLU_RS27850	0.51	-2.1
6,199,273	-		PFLU_RS27850	0.51	-1.5
6,199,273	-		PFLU_RS27850	0.51	+2.8
6,199,273	-		PFLU_RS27850	0.51	+1.8
6,199,273	-		PFLU_RS27850	0.51	-1.4
6,199,372	+		PFLU_RS27850	0.58	-1.0
6,199,373	-		PFLU_RS27850	0.58	+0.8
6,199,373	-		PFLU_RS27850	0.58	-1.7
6,199,458	+		PFLU_RS27850	0.64	+0.4
6,199,459	-		PFLU_RS27850	0.64	-1.8
6,199,459	-		PFLU_RS27850	0.64	-0.9
6,199,593	+		PFLU_RS27850	0.73	+1.1
6,199,593	+		PFLU_RS27850	0.73	-2.4
6,199,593	+		PFLU_RS27850	0.73	-1.2
6,199,593	+		PFLU_RS27850	0.73	+1.6
6,199,593	+		PFLU_RS27850	0.73	+3.6
6,199,593	+		PFLU_RS27850	0.73	+0.7
6,199,593	+		PFLU_RS27850	0.73	-1.0
6,199,593	+		PFLU_RS27850	0.73	+0.1
6,199,593	+		PFLU_RS27850	0.73	+1.4
6,199,593	+		PFLU_RS27850	0.73	+1.3
6,199,594	-		PFLU_RS27850	0.73	+0.8
6,199,594	-		PFLU_RS27850	0.73	-0.3
6,199,608	-		PFLU_RS27850	0.74	-1.9
6,199,632	+		PFLU_RS27850	0.76	+2.3
6,199,632	+		PFLU_RS27850	0.76	-0.8
6,199,633	-		PFLU_RS27850	0.76	+0.2
6,199,633	-		PFLU_RS27850	0.76	+0.7
6,199,674	+		PFLU_RS27850	0.79	-1.8
6,199,675	-		PFLU_RS27850	0.79	-0.6
6,199,675	-		PFLU_RS27850	0.79	+2.4
6,199,675	-		PFLU_RS27850	0.79	+1.7
6,199,696	-		PFLU_RS27850	0.80	+0.9
6,199,731	+		PFLU_RS27850	0.83	-1.7
6,199,731	+		PFLU_RS27850	0.83	-1.2
6,199,731	+		PFLU_RS27850	0.83	+1.0
6,199,731	+		PFLU_RS27850	0.83	-0.4
6,199,731	+		PFLU_RS27850	0.83	-1.3
6,199,731	+		PFLU_RS27850	0.83	-1.0
6,199,731	+		PFLU_RS27850	0.83	-0.2
6,199,731	+		PFLU_RS27850	0.83	-0.2
6,199,731	+		PFLU_RS27850	0.83	+1.6
6,199,731	+		PFLU_RS27850	0.83	+0.2
6,199,732	-		PFLU_RS27850	0.83	+1.0
6,199,732	-		PFLU_RS27850	0.83	+1.3
6,199,732	-		PFLU_RS27850	0.83	+1.7
6,199,732	-		PFLU_RS27850	0.83	+0.4
6,199,732	-		PFLU_RS27850	0.83	-1.1
6,199,732	-		PFLU_RS27850	0.83	-1.9
6,199,732	-		PFLU_RS27850	0.83	+1.8
6,199,732	-		PFLU_RS27850	0.83	-1.0
6,199,732	-		PFLU_RS27850	0.83	-0.3
6,199,732	-		PFLU_RS27850	0.83	-1.0
6,199,732	-		PFLU_RS27850	0.83	-2.5
6,199,732	-		PFLU_RS27850	0.83	+4.4
6,199,732	-		PFLU_RS27850	0.83	+3.2
6,199,764	+		PFLU_RS27850	0.85	-0.5
6,199,764	+		PFLU_RS27850	0.85	-0.2
6,199,765	-		PFLU_RS27850	0.85	+0.4
6,199,796	+		PFLU_RS27850	0.87	+4.1
6,199,796	+		PFLU_RS27850	0.87	-0.7
6,199,796	+		PFLU_RS27850	0.87	-0.9
6,199,797	-		PFLU_RS27850	0.87	+0.3
6,199,797	-		PFLU_RS27850	0.87	-2.5
6,199,812	+		PFLU_RS27850	0.88	-1.2
6,199,812	+		PFLU_RS27850	0.88	-0.8
6,199,812	+		PFLU_RS27850	0.88	+0.5
6,199,813	-		PFLU_RS27850	0.88	+0.5
6,199,890	+				+1.6
6,199,939	+				+0.2
6,199,939	+				+0.3
6,199,939	+				-1.4
6,199,939	+				+2.1
6,199,940	-				-1.8
6,199,940	-				+0.5
6,199,940	-				-0.8
6,199,940	-				+0.3
6,199,940	-				-1.8
6,200,034	-				+0.1
6,200,034	-				-2.5
6,200,123	+		PFLU_RS27855	0.18	+0.5
6,200,124	-		PFLU_RS27855	0.18	-2.4
6,200,124	-		PFLU_RS27855	0.18	+0.3
6,200,127	+		PFLU_RS27855	0.19	-2.3
6,200,127	+		PFLU_RS27855	0.19	-1.1
6,200,127	+		PFLU_RS27855	0.19	+0.2
6,200,127	+		PFLU_RS27855	0.19	-0.5
6,200,127	+		PFLU_RS27855	0.19	-1.2
6,200,128	-		PFLU_RS27855	0.19	+0.4
6,200,128	-		PFLU_RS27855	0.19	+1.2
6,200,150	+		PFLU_RS27855	0.21	+0.7
6,200,150	+		PFLU_RS27855	0.21	+0.0
6,200,150	+		PFLU_RS27855	0.21	+1.1
6,200,150	+		PFLU_RS27855	0.21	-0.4
6,200,150	+		PFLU_RS27855	0.21	-1.5
6,200,150	+		PFLU_RS27855	0.21	+1.1
6,200,150	+		PFLU_RS27855	0.21	+0.1
6,200,151	-		PFLU_RS27855	0.21	+0.7
6,200,151	-		PFLU_RS27855	0.21	+0.3
6,200,151	-		PFLU_RS27855	0.21	+1.7
6,200,151	-		PFLU_RS27855	0.21	-0.5
6,200,151	-		PFLU_RS27855	0.21	+3.3
6,200,151	-		PFLU_RS27855	0.21	-2.4
6,200,151	-		PFLU_RS27855	0.21	-0.9
6,200,151	-		PFLU_RS27855	0.21	-1.3
6,200,312	+		PFLU_RS27855	0.41	+3.5
6,200,313	-		PFLU_RS27855	0.41	+0.2
6,200,421	-		PFLU_RS27855	0.55	-2.6
6,200,786	+				+2.6
6,200,786	+				-2.7
6,200,786	+				+1.7
6,200,787	-				-0.1
6,200,787	-				-0.3
6,200,840	+				-0.5
6,200,841	-				-0.2
6,200,847	+				-1.5
6,200,847	+				-0.7
6,200,847	+				+3.5
6,200,848	-				-1.5
6,200,848	-				-1.6
6,200,848	-				+2.3
6,201,157	-		PFLU_RS27860	0.33	+2.2
6,201,210	+		PFLU_RS27860	0.38	-0.7
6,201,210	+		PFLU_RS27860	0.38	-0.2
6,201,210	+		PFLU_RS27860	0.38	-0.4
6,201,211	-		PFLU_RS27860	0.38	+2.6
6,201,211	-		PFLU_RS27860	0.38	-1.0
6,201,211	-		PFLU_RS27860	0.38	-1.2
6,201,217	+		PFLU_RS27860	0.38	-0.2
6,201,217	+		PFLU_RS27860	0.38	+0.4
6,201,218	-		PFLU_RS27860	0.38	+3.8
6,201,356	-		PFLU_RS27860	0.51	+2.2
6,201,393	+		PFLU_RS27860	0.54	-1.6
6,201,393	+		PFLU_RS27860	0.54	+2.3
6,201,393	+		PFLU_RS27860	0.54	+3.4
6,201,394	-		PFLU_RS27860	0.54	+0.8
6,201,394	-		PFLU_RS27860	0.54	-1.8
6,201,394	-		PFLU_RS27860	0.54	-1.6
6,201,394	-		PFLU_RS27860	0.54	+0.1
6,201,394	-		PFLU_RS27860	0.54	+1.1
6,201,394	-		PFLU_RS27860	0.54	-1.1
6,201,394	-		PFLU_RS27860	0.54	+2.2
6,201,460	-		PFLU_RS27860	0.60	+0.5
6,201,460	-		PFLU_RS27860	0.60	-0.4
6,201,460	-		PFLU_RS27860	0.60	+1.1
6,201,460	-		PFLU_RS27860	0.60	-0.7
6,201,460	-		PFLU_RS27860	0.60	-1.0
6,201,513	+		PFLU_RS27860	0.65	-0.9
6,201,513	+		PFLU_RS27860	0.65	-0.8
6,201,513	+		PFLU_RS27860	0.65	-1.6
6,201,514	-		PFLU_RS27860	0.65	+0.2
6,201,514	-		PFLU_RS27860	0.65	+1.3
6,201,514	-		PFLU_RS27860	0.65	-0.0
6,201,514	-		PFLU_RS27860	0.65	-1.4
6,201,660	+		PFLU_RS27860	0.79	-0.8
6,201,690	+		PFLU_RS27860	0.81	-1.2
6,201,690	+		PFLU_RS27860	0.81	+2.2
6,201,690	+		PFLU_RS27860	0.81	+0.1
6,201,691	-		PFLU_RS27860	0.81	+0.5
6,201,691	-		PFLU_RS27860	0.81	+1.0
6,201,691	-		PFLU_RS27860	0.81	+0.3