Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27840

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
6,195,145	+		PFLU_RS27835	0.22	-1.9
6,195,145	+		PFLU_RS27835	0.22	+1.2
6,195,145	+		PFLU_RS27835	0.22	-1.7
6,195,145	+		PFLU_RS27835	0.22	+0.1
6,195,145	+		PFLU_RS27835	0.22	-1.3
6,195,145	+		PFLU_RS27835	0.22	+2.8
6,195,145	+		PFLU_RS27835	0.22	+2.8
6,195,145	+		PFLU_RS27835	0.22	+1.3
6,195,146	-		PFLU_RS27835	0.23	+0.6
6,195,146	-		PFLU_RS27835	0.23	-0.0
6,195,146	-		PFLU_RS27835	0.23	+3.9
6,195,146	-		PFLU_RS27835	0.23	-1.5
6,195,146	-		PFLU_RS27835	0.23	+1.9
6,195,146	-		PFLU_RS27835	0.23	-1.7
6,195,146	-		PFLU_RS27835	0.23	-2.1
6,195,146	-		PFLU_RS27835	0.23	+1.8
6,195,146	-		PFLU_RS27835	0.23	-1.0
6,195,150	+		PFLU_RS27835	0.23	-0.5
6,195,150	+		PFLU_RS27835	0.23	-2.9
6,195,326	+		PFLU_RS27835	0.40	+1.7
6,195,326	+		PFLU_RS27835	0.40	+2.8
6,195,326	+		PFLU_RS27835	0.40	+1.4
6,195,364	+		PFLU_RS27835	0.44	-0.7
6,195,364	+		PFLU_RS27835	0.44	+2.1
6,195,365	-		PFLU_RS27835	0.44	+2.4
6,195,365	-		PFLU_RS27835	0.44	+2.8
6,195,657	-		PFLU_RS27835	0.72	+1.2
6,195,844	+		PFLU_RS27835	0.90	+0.0
6,195,844	+		PFLU_RS27835	0.90	+1.8
6,195,844	+		PFLU_RS27835	0.90	-1.1
6,195,845	-		PFLU_RS27835	0.90	-0.5
6,195,845	-		PFLU_RS27835	0.90	+0.8
6,195,845	-		PFLU_RS27835	0.90	+1.3
6,195,908	+				-0.7
6,195,909	-				+0.5
6,195,909	-				-0.2
6,195,909	-				+0.6
6,195,909	-				-1.0
6,195,974	+				+0.5
6,195,974	+				-1.8
6,195,975	-				+0.9
6,195,975	-				+1.2
6,195,990	+				+0.2
6,195,991	-				+2.8
6,195,991	-				+0.4
6,196,006	+				+0.2
6,196,006	+				+1.4
6,196,006	+				+0.2
6,196,006	+				+1.2
6,196,006	+				+2.1
6,196,006	+				-1.0
6,196,006	+				-1.7
6,196,006	+				+0.5
6,196,006	+				+0.5
6,196,006	+				-2.6
6,196,006	+				+2.4
6,196,006	+				-0.5
6,196,006	+				+1.5
6,196,006	+				+4.0
6,196,006	+				+1.2
6,196,006	+				+0.2
6,196,007	-				+1.2
6,196,007	-				+0.5
6,196,007	-				-1.8
6,196,007	-				+0.3
6,196,007	-				+1.5
6,196,007	-				+0.0
6,196,007	-				+0.8
6,196,007	-				+2.3
6,196,010	+				-2.1
6,196,010	+				-1.0
6,196,010	+				+0.9
6,196,010	+				+0.6
6,196,010	+				-1.4
6,196,010	+				+0.2
6,196,010	+				-2.1
6,196,010	+				-1.6
6,196,010	+				-0.9
6,196,010	+				+2.5
6,196,010	+				-1.6
6,196,010	+				+0.4
6,196,010	+				-1.8
6,196,010	+				-0.5
6,196,010	+				+1.4
6,196,010	+				-0.8
6,196,010	+				-1.1
6,196,010	+				+0.1
6,196,010	+				-0.7
6,196,010	+				-0.9
6,196,011	-				+0.8
6,196,011	-				+0.8
6,196,011	-				+1.8
6,196,011	-				-0.0
6,196,011	-				+2.3
6,196,011	-				+1.8
6,196,011	-				+0.1
6,196,011	-				-0.2
6,196,011	-				+1.9
6,196,011	-				+1.0
6,196,011	-				+1.1
6,196,011	-				-1.1
6,196,011	-				-2.3
6,196,011	-				-1.5
6,196,031	-				-1.5
6,196,089	+				+2.6
6,196,090	-				-0.0
6,196,115	-				+0.5
6,196,125	-				+0.6
6,196,134	+				-0.2
6,196,134	+				+1.0
6,196,135	-				-0.2
6,196,135	-				-1.3
6,196,181	+		PFLU_RS27840	0.26	-0.9
6,196,181	+		PFLU_RS27840	0.26	-1.2
6,196,212	+		PFLU_RS27840	0.42	+0.4
6,196,213	-		PFLU_RS27840	0.42	-2.0
6,196,213	-		PFLU_RS27840	0.42	+0.7
6,196,213	-		PFLU_RS27840	0.42	-1.2
6,196,263	+		PFLU_RS27840	0.67	-1.0
6,196,264	-		PFLU_RS27840	0.68	+1.6
6,196,264	-		PFLU_RS27840	0.68	+0.1
6,196,264	-		PFLU_RS27840	0.68	-0.0
6,196,264	-		PFLU_RS27840	0.68	+1.2
6,196,264	-		PFLU_RS27840	0.68	-0.7
6,196,264	-		PFLU_RS27840	0.68	+1.0
6,196,313	+				-2.3
6,196,313	+				-1.0
6,196,313	+				-0.5
6,196,314	-				-1.2
6,196,314	-				-1.1
6,196,314	-				+2.1
6,196,317	+				+1.1
6,196,318	-				-2.1
6,196,403	+				+2.4
6,196,403	+				+2.8
6,196,404	-				-2.7
6,196,419	+				+2.3
6,196,441	+				+2.7
6,196,441	+				-0.6
6,196,442	-				+1.0
6,196,442	-				+0.8
6,196,442	-				-0.4
6,196,442	-				-0.0
6,196,497	-				+1.3
6,196,643	+		PFLU_RS27845	0.11	-1.1
6,196,643	+		PFLU_RS27845	0.11	-0.4
6,196,644	-		PFLU_RS27845	0.11	-1.2
6,196,644	-		PFLU_RS27845	0.11	+3.7
6,196,669	+		PFLU_RS27845	0.13	-0.2
6,196,675	+		PFLU_RS27845	0.13	-1.7
6,196,675	+		PFLU_RS27845	0.13	-1.9
6,196,675	+		PFLU_RS27845	0.13	-2.3
6,196,675	+		PFLU_RS27845	0.13	+0.6
6,196,676	-		PFLU_RS27845	0.13	+1.8
6,196,676	-		PFLU_RS27845	0.13	-2.0
6,196,758	-		PFLU_RS27845	0.17	-1.7
6,196,795	+		PFLU_RS27845	0.20	+2.0
6,196,795	+		PFLU_RS27845	0.20	-1.5
6,196,795	+		PFLU_RS27845	0.20	+3.3
6,196,796	-		PFLU_RS27845	0.20	+0.5
6,196,796	-		PFLU_RS27845	0.20	+1.2
6,196,796	-		PFLU_RS27845	0.20	-0.3
6,196,796	-		PFLU_RS27845	0.20	+0.1
6,196,822	-		PFLU_RS27845	0.21	-0.4
6,196,822	-		PFLU_RS27845	0.21	+0.1
6,196,891	+		PFLU_RS27845	0.25	-1.0
6,196,891	+		PFLU_RS27845	0.25	+0.4
6,196,891	+		PFLU_RS27845	0.25	-1.2
6,196,891	+		PFLU_RS27845	0.25	+1.5
6,196,891	+		PFLU_RS27845	0.25	-3.4
6,196,892	-		PFLU_RS27845	0.25	+3.9
6,196,892	-		PFLU_RS27845	0.25	+1.9
6,196,918	+		PFLU_RS27845	0.26	-0.5
6,196,918	+		PFLU_RS27845	0.26	-2.2
6,196,918	+		PFLU_RS27845	0.26	+2.3
6,196,918	+		PFLU_RS27845	0.26	+1.4
6,196,919	-		PFLU_RS27845	0.26	+2.7
6,196,919	-		PFLU_RS27845	0.26	-0.8
6,196,940	-		PFLU_RS27845	0.28	-0.0
6,196,940	-		PFLU_RS27845	0.28	+2.8
6,196,951	+		PFLU_RS27845	0.28	-0.4
6,196,951	+		PFLU_RS27845	0.28	-1.3
6,196,951	+		PFLU_RS27845	0.28	+0.8
6,196,951	+		PFLU_RS27845	0.28	+0.8
6,196,951	+		PFLU_RS27845	0.28	+0.2
6,196,951	+		PFLU_RS27845	0.28	+1.4
6,196,951	+		PFLU_RS27845	0.28	-1.1
6,196,951	+		PFLU_RS27845	0.28	-1.1
6,196,951	+		PFLU_RS27845	0.28	+1.4
6,196,951	+		PFLU_RS27845	0.28	-0.7
6,196,951	+		PFLU_RS27845	0.28	+1.5
6,196,951	+		PFLU_RS27845	0.28	-1.8
6,196,952	-		PFLU_RS27845	0.28	+2.7
6,196,952	-		PFLU_RS27845	0.28	-2.5
6,196,952	-		PFLU_RS27845	0.28	+1.9
6,196,952	-		PFLU_RS27845	0.28	-0.0
6,196,952	-		PFLU_RS27845	0.28	-2.6
6,196,952	-		PFLU_RS27845	0.28	-2.3
6,196,952	-		PFLU_RS27845	0.28	+2.3
6,196,952	-		PFLU_RS27845	0.28	-1.1
6,196,952	-		PFLU_RS27845	0.28	+0.3
6,196,952	-		PFLU_RS27845	0.28	-2.0
6,196,952	-		PFLU_RS27845	0.28	+0.5
6,196,952	-		PFLU_RS27845	0.28	-1.7
6,196,952	-		PFLU_RS27845	0.28	+3.0
6,196,964	+		PFLU_RS27845	0.29	-2.2
6,196,996	+		PFLU_RS27845	0.31	-1.2
6,196,996	+		PFLU_RS27845	0.31	-1.9
6,196,996	+		PFLU_RS27845	0.31	-2.5
6,196,996	+		PFLU_RS27845	0.31	+1.3
6,196,996	+		PFLU_RS27845	0.31	-1.0
6,196,996	+		PFLU_RS27845	0.31	-1.7
6,196,996	+		PFLU_RS27845	0.31	+2.3
6,196,997	-		PFLU_RS27845	0.31	-1.9
6,196,997	-		PFLU_RS27845	0.31	+2.9
6,196,997	-		PFLU_RS27845	0.31	-0.6
6,197,049	+		PFLU_RS27845	0.33	+1.6
6,197,050	-		PFLU_RS27845	0.34	+2.7
6,197,068	+		PFLU_RS27845	0.35	-1.7
6,197,068	+		PFLU_RS27845	0.35	+1.0
6,197,068	+		PFLU_RS27845	0.35	-0.9
6,197,068	+		PFLU_RS27845	0.35	-1.1
6,197,068	+		PFLU_RS27845	0.35	-0.9
6,197,068	+		PFLU_RS27845	0.35	+2.8
6,197,068	+		PFLU_RS27845	0.35	-0.8
6,197,068	+		PFLU_RS27845	0.35	+3.2
6,197,068	+		PFLU_RS27845	0.35	+0.8
6,197,068	+		PFLU_RS27845	0.35	+3.0
6,197,069	-		PFLU_RS27845	0.35	+0.3
6,197,069	-		PFLU_RS27845	0.35	-3.0
6,197,069	-		PFLU_RS27845	0.35	-1.9
6,197,069	-		PFLU_RS27845	0.35	+1.7
6,197,069	-		PFLU_RS27845	0.35	+1.1
6,197,069	-		PFLU_RS27845	0.35	+2.5
6,197,069	-		PFLU_RS27845	0.35	-0.0
6,197,069	-		PFLU_RS27845	0.35	+1.7
6,197,069	-		PFLU_RS27845	0.35	-0.0
6,197,069	-		PFLU_RS27845	0.35	+1.3
6,197,069	-		PFLU_RS27845	0.35	+0.5
6,197,069	-		PFLU_RS27845	0.35	-2.3
6,197,069	-		PFLU_RS27845	0.35	-1.0
6,197,069	-		PFLU_RS27845	0.35	+0.3
6,197,069	-		PFLU_RS27845	0.35	-0.5
6,197,069	-		PFLU_RS27845	0.35	-0.5
6,197,069	-		PFLU_RS27845	0.35	-0.7
6,197,069	-		PFLU_RS27845	0.35	+1.6
6,197,077	+		PFLU_RS27845	0.35	+1.1
6,197,077	+		PFLU_RS27845	0.35	-0.0
6,197,077	+		PFLU_RS27845	0.35	+0.7
6,197,077	+		PFLU_RS27845	0.35	-0.8
6,197,077	+		PFLU_RS27845	0.35	+2.0
6,197,077	+		PFLU_RS27845	0.35	+2.1
6,197,077	+		PFLU_RS27845	0.35	-1.9
6,197,077	+		PFLU_RS27845	0.35	+0.0
6,197,077	+		PFLU_RS27845	0.35	+0.4
6,197,077	+		PFLU_RS27845	0.35	-0.0
6,197,077	+		PFLU_RS27845	0.35	-0.0
6,197,078	-		PFLU_RS27845	0.35	+3.2
6,197,078	-		PFLU_RS27845	0.35	-1.1
6,197,078	-		PFLU_RS27845	0.35	-2.1
6,197,078	-		PFLU_RS27845	0.35	+0.5
6,197,078	-		PFLU_RS27845	0.35	-0.1
6,197,078	-		PFLU_RS27845	0.35	+3.1
6,197,078	-		PFLU_RS27845	0.35	+0.3
6,197,078	-		PFLU_RS27845	0.35	+1.3
6,197,078	-		PFLU_RS27845	0.35	-2.0
6,197,078	-		PFLU_RS27845	0.35	-0.9
6,197,081	+		PFLU_RS27845	0.35	-0.0
6,197,081	+		PFLU_RS27845	0.35	+1.7
6,197,081	+		PFLU_RS27845	0.35	-1.9
6,197,081	+		PFLU_RS27845	0.35	-1.0
6,197,081	+		PFLU_RS27845	0.35	+1.4
6,197,081	+		PFLU_RS27845	0.35	+0.5
6,197,081	+		PFLU_RS27845	0.35	+1.5
6,197,081	+		PFLU_RS27845	0.35	+0.1
6,197,081	+		PFLU_RS27845	0.35	+1.1
6,197,081	+		PFLU_RS27845	0.35	+3.9
6,197,081	+		PFLU_RS27845	0.35	+0.5
6,197,081	+		PFLU_RS27845	0.35	+0.3
6,197,081	+		PFLU_RS27845	0.35	+0.2
6,197,081	+		PFLU_RS27845	0.35	-0.2
6,197,081	+		PFLU_RS27845	0.35	+2.5
6,197,082	-		PFLU_RS27845	0.35	+1.2
6,197,082	-		PFLU_RS27845	0.35	-2.4
6,197,082	-		PFLU_RS27845	0.35	-0.3
6,197,082	-		PFLU_RS27845	0.35	-1.8
6,197,082	-		PFLU_RS27845	0.35	+4.4
6,197,082	-		PFLU_RS27845	0.35	-1.4
6,197,082	-		PFLU_RS27845	0.35	-1.5
6,197,082	-		PFLU_RS27845	0.35	+2.9
6,197,082	-		PFLU_RS27845	0.35	-2.6
6,197,082	-		PFLU_RS27845	0.35	-0.8
6,197,100	+		PFLU_RS27845	0.36	+1.7
6,197,100	+		PFLU_RS27845	0.36	+0.8
6,197,101	-		PFLU_RS27845	0.36	+0.2
6,197,101	-		PFLU_RS27845	0.36	-0.0
6,197,114	+		PFLU_RS27845	0.37	-1.3
6,197,183	+		PFLU_RS27845	0.41	+0.6
6,197,183	+		PFLU_RS27845	0.41	+4.3
6,197,183	+		PFLU_RS27845	0.41	+0.8
6,197,183	+		PFLU_RS27845	0.41	-1.7
6,197,183	+		PFLU_RS27845	0.41	+1.8
6,197,184	-		PFLU_RS27845	0.41	+3.1
6,197,184	-		PFLU_RS27845	0.41	-1.9
6,197,184	-		PFLU_RS27845	0.41	+2.5
6,197,184	-		PFLU_RS27845	0.41	+2.8
6,197,184	-		PFLU_RS27845	0.41	+3.5
6,197,185	+		PFLU_RS27845	0.41	+0.5
6,197,185	+		PFLU_RS27845	0.41	-2.3
6,197,185	+		PFLU_RS27845	0.41	+3.8
6,197,185	+		PFLU_RS27845	0.41	+2.2
6,197,186	-		PFLU_RS27845	0.41	+0.5
6,197,186	-		PFLU_RS27845	0.41	-1.9
6,197,186	-		PFLU_RS27845	0.41	+1.0
6,197,186	-		PFLU_RS27845	0.41	-0.0
6,197,186	-		PFLU_RS27845	0.41	+2.8
6,197,206	+		PFLU_RS27845	0.42	+3.3
6,197,206	+		PFLU_RS27845	0.42	-2.0
6,197,206	+		PFLU_RS27845	0.42	-1.2
6,197,206	+		PFLU_RS27845	0.42	-0.9
6,197,206	+		PFLU_RS27845	0.42	+2.7
6,197,206	+		PFLU_RS27845	0.42	-0.0
6,197,206	+		PFLU_RS27845	0.42	-1.7
6,197,206	+		PFLU_RS27845	0.42	-1.5
6,197,206	+		PFLU_RS27845	0.42	-0.7
6,197,206	+		PFLU_RS27845	0.42	-2.5
6,197,206	+		PFLU_RS27845	0.42	+0.8
6,197,207	-		PFLU_RS27845	0.42	-1.2
6,197,207	-		PFLU_RS27845	0.42	-0.2
6,197,207	-		PFLU_RS27845	0.42	-1.0
6,197,207	-		PFLU_RS27845	0.42	+0.2
6,197,207	-		PFLU_RS27845	0.42	+1.4
6,197,207	-		PFLU_RS27845	0.42	-2.5
6,197,207	-		PFLU_RS27845	0.42	+0.3
6,197,207	-		PFLU_RS27845	0.42	+0.8
6,197,207	-		PFLU_RS27845	0.42	+0.8
6,197,207	-		PFLU_RS27845	0.42	+3.0
6,197,207	-		PFLU_RS27845	0.42	-0.8
6,197,207	-		PFLU_RS27845	0.42	-0.8
6,197,207	-		PFLU_RS27845	0.42	+1.8
6,197,228	+		PFLU_RS27845	0.43	-1.0
6,197,229	-		PFLU_RS27845	0.43	-0.4
6,197,272	-		PFLU_RS27845	0.46	-1.3
6,197,272	-		PFLU_RS27845	0.46	+1.5
6,197,272	-		PFLU_RS27845	0.46	-1.9
6,197,272	-		PFLU_RS27845	0.46	-0.3