Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21790

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
4,904,726	-		PFLU_RS21785	0.37	-0.8
4,905,082	+		PFLU_RS21785	0.63	+1.0
4,905,082	+		PFLU_RS21785	0.63	+2.9
4,905,082	+		PFLU_RS21785	0.63	+2.3
4,905,082	+		PFLU_RS21785	0.63	-0.2
4,905,082	+		PFLU_RS21785	0.63	-1.5
4,905,082	+		PFLU_RS21785	0.63	-1.9
4,905,082	+		PFLU_RS21785	0.63	-0.2
4,905,082	+		PFLU_RS21785	0.63	+1.4
4,905,082	+		PFLU_RS21785	0.63	-2.1
4,905,083	-		PFLU_RS21785	0.63	-1.1
4,905,083	-		PFLU_RS21785	0.63	+1.4
4,905,083	-		PFLU_RS21785	0.63	+0.8
4,905,269	+		PFLU_RS21785	0.77	-0.2
4,905,269	+		PFLU_RS21785	0.77	+0.5
4,905,270	-		PFLU_RS21785	0.77	-2.3
4,905,270	-		PFLU_RS21785	0.77	+0.3
4,905,292	+		PFLU_RS21785	0.78	-1.5
4,905,293	-		PFLU_RS21785	0.78	-0.4
4,905,429	+		PFLU_RS21785	0.88	-2.2
4,905,429	+		PFLU_RS21785	0.88	+2.1
4,905,429	+		PFLU_RS21785	0.88	+1.7
4,905,429	+		PFLU_RS21785	0.88	+1.0
4,905,429	+		PFLU_RS21785	0.88	+2.2
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	-0.3
4,905,429	+		PFLU_RS21785	0.88	-1.9
4,905,429	+		PFLU_RS21785	0.88	-1.2
4,905,429	+		PFLU_RS21785	0.88	+4.1
4,905,429	+		PFLU_RS21785	0.88	+1.4
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	-0.8
4,905,429	+		PFLU_RS21785	0.88	+0.1
4,905,429	+		PFLU_RS21785	0.88	+3.1
4,905,429	+		PFLU_RS21785	0.88	-0.8
4,905,429	+		PFLU_RS21785	0.88	-1.5
4,905,429	+		PFLU_RS21785	0.88	+0.8
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	+2.3
4,905,429	+		PFLU_RS21785	0.88	-2.0
4,905,429	+		PFLU_RS21785	0.88	+0.6
4,905,429	+		PFLU_RS21785	0.88	-0.2
4,905,430	-		PFLU_RS21785	0.88	-0.5
4,905,430	-		PFLU_RS21785	0.88	+1.8
4,905,430	-		PFLU_RS21785	0.88	+1.8
4,905,430	-		PFLU_RS21785	0.88	-0.2
4,905,430	-		PFLU_RS21785	0.88	-0.7
4,905,430	-		PFLU_RS21785	0.88	-1.2
4,905,430	-		PFLU_RS21785	0.88	+4.0
4,905,430	-		PFLU_RS21785	0.88	-2.4
4,905,430	-		PFLU_RS21785	0.88	+1.1
4,905,430	-		PFLU_RS21785	0.88	-2.9
4,905,430	-		PFLU_RS21785	0.88	+3.1
4,905,430	-		PFLU_RS21785	0.88	-1.2
4,905,430	-		PFLU_RS21785	0.88	+2.9
4,905,430	-		PFLU_RS21785	0.88	+4.7
4,905,430	-		PFLU_RS21785	0.88	-0.7
4,905,430	-		PFLU_RS21785	0.88	-0.6
4,905,430	-		PFLU_RS21785	0.88	-1.6
4,905,430	-		PFLU_RS21785	0.88	+1.5
4,905,430	-		PFLU_RS21785	0.88	+2.2
4,905,430	-		PFLU_RS21785	0.88	+3.0
4,905,430	-		PFLU_RS21785	0.88	+1.2
4,905,430	-		PFLU_RS21785	0.88	+2.1
4,905,430	-		PFLU_RS21785	0.88	+0.3
4,905,430	-		PFLU_RS21785	0.88	-1.2
4,905,430	-		PFLU_RS21785	0.88	-2.7
4,905,430	-		PFLU_RS21785	0.88	+1.3
4,905,573	+				+1.3
4,905,573	+				+1.5
4,905,573	+				-2.2
4,905,573	+				-1.2
4,905,573	+				+3.3
4,905,574	-				+2.3
4,905,574	-				+2.5
4,905,574	-				+2.5
4,905,574	-				+0.5
4,905,574	-				+2.5
4,905,574	-				+3.3
4,905,574	-				+0.3
4,905,574	-				-0.5
4,905,574	-				+3.7
4,905,574	-				+3.0
4,905,574	-				+1.5
4,905,574	-				+0.3
4,905,585	-				-1.1
4,905,585	-				+1.6
4,905,599	+				-1.1
4,905,599	+				+1.1
4,905,600	-				+1.8
4,905,600	-				+1.8
4,905,845	+		PFLU_RS21790	0.20	+1.3
4,905,845	+		PFLU_RS21790	0.20	-0.6
4,905,845	+		PFLU_RS21790	0.20	-0.5
4,905,845	+		PFLU_RS21790	0.20	-0.8
4,905,846	-		PFLU_RS21790	0.20	-1.2
4,905,846	-		PFLU_RS21790	0.20	+3.4
4,905,846	-		PFLU_RS21790	0.20	+0.3
4,905,846	-		PFLU_RS21790	0.20	+0.2
4,905,846	-		PFLU_RS21790	0.20	-1.8
4,905,846	-		PFLU_RS21790	0.20	-1.4
4,905,846	-		PFLU_RS21790	0.20	-0.8
4,906,190	+		PFLU_RS21790	0.49	-2.0
4,906,190	+		PFLU_RS21790	0.49	+0.3
4,906,190	+		PFLU_RS21790	0.49	+2.4
4,906,190	+		PFLU_RS21790	0.49	+3.7
4,906,190	+		PFLU_RS21790	0.49	-1.1
4,906,190	+		PFLU_RS21790	0.49	+1.8
4,906,190	+		PFLU_RS21790	0.49	-1.0
4,906,190	+		PFLU_RS21790	0.49	+2.0
4,906,190	+		PFLU_RS21790	0.49	+3.1
4,906,190	+		PFLU_RS21790	0.49	+2.8
4,906,191	-		PFLU_RS21790	0.49	+2.1
4,906,191	-		PFLU_RS21790	0.49	+4.1
4,906,191	-		PFLU_RS21790	0.49	+1.1
4,906,191	-		PFLU_RS21790	0.49	-1.3
4,906,191	-		PFLU_RS21790	0.49	+1.8
4,906,191	-		PFLU_RS21790	0.49	+2.3
4,906,191	-		PFLU_RS21790	0.49	-1.0
4,906,191	-		PFLU_RS21790	0.49	-2.2
4,906,191	-		PFLU_RS21790	0.49	+0.5
4,906,191	-		PFLU_RS21790	0.49	+2.2
4,906,191	-		PFLU_RS21790	0.49	+3.0
4,906,191	-		PFLU_RS21790	0.49	-1.8
4,906,673	+		PFLU_RS21790	0.89	+1.8
4,906,673	+		PFLU_RS21790	0.89	-1.2
4,906,674	-		PFLU_RS21790	0.89	+2.2
4,906,674	-		PFLU_RS21790	0.89	+2.6
4,906,751	-				+0.0
4,906,785	+				-1.2
4,906,785	+				-0.2
4,906,785	+				-0.7
4,906,785	+				+2.1
4,906,785	+				-0.5
4,906,786	-				+2.5
4,906,786	-				+2.7
4,906,786	-				+0.3
4,906,789	+				-2.1
4,906,789	+				+2.3
4,906,789	+				+1.2
4,906,789	+				+3.1
4,906,789	+				+0.9
4,906,789	+				-0.4
4,906,790	-				+0.7
4,906,790	-				-1.7
4,906,790	-				+2.7
4,906,790	-				-1.3
4,906,790	-				+1.7
4,906,790	-				-2.1
4,906,790	-				+1.8
4,906,790	-				+2.5
4,906,790	-				+3.2
4,906,790	-				-0.1
4,906,790	-				+2.8
4,906,839	+				+0.4
4,906,840	-				+0.0
4,906,862	+				-1.1
4,906,862	+				+2.3
4,906,862	+				+0.0
4,906,862	+				+2.0
4,906,863	-				+3.0
4,906,863	-				-0.5
4,906,868	+				-2.6
4,906,868	+				-1.0
4,906,868	+				+1.9
4,906,868	+				+1.3
4,906,868	+				+1.9
4,906,868	+				+0.1
4,906,869	-				-1.5
4,906,869	-				+1.6
4,906,869	-				+3.3
4,906,909	+				-1.2
4,906,909	+				+0.8
4,906,909	+				-1.2
4,906,909	+				+0.1
4,906,909	+				-1.1
4,906,910	-				+1.5
4,906,966	+		PFLU_RS31760	0.51	+0.0
4,906,966	+		PFLU_RS31760	0.51	+3.7
4,906,966	+		PFLU_RS31760	0.51	+1.6
4,906,966	+		PFLU_RS31760	0.51	+2.9
4,906,966	+		PFLU_RS31760	0.51	+1.2
4,906,966	+		PFLU_RS31760	0.51	-0.4
4,906,966	+		PFLU_RS31760	0.51	+0.2
4,906,966	+		PFLU_RS31760	0.51	-0.5
4,906,966	+		PFLU_RS31760	0.51	-2.5
4,906,966	+		PFLU_RS31760	0.51	-0.4
4,906,966	+		PFLU_RS31760	0.51	-0.7
4,906,966	+		PFLU_RS31760	0.51	+1.2
4,906,967	-		PFLU_RS31760	0.52	-0.5
4,906,967	-		PFLU_RS31760	0.52	+2.3
4,906,967	-		PFLU_RS31760	0.52	-1.1
4,906,967	-		PFLU_RS31760	0.52	+0.4
4,906,967	-		PFLU_RS31760	0.52	+0.0
4,906,967	-		PFLU_RS31760	0.52	+2.5
4,906,967	-		PFLU_RS31760	0.52	+4.8
4,906,967	-		PFLU_RS31760	0.52	-0.8
4,906,967	-		PFLU_RS31760	0.52	+0.8
4,906,967	-		PFLU_RS31760	0.52	+2.6
4,906,967	-		PFLU_RS31760	0.52	+0.8
4,906,967	-		PFLU_RS31760	0.52	-1.2
4,906,967	-		PFLU_RS31760	0.52	-1.6
4,906,997	+		PFLU_RS31760	0.78	+3.9
4,906,997	+		PFLU_RS31760	0.78	-1.4
4,906,997	+		PFLU_RS31760	0.78	-2.4
4,906,997	+		PFLU_RS31760	0.78	-1.3
4,906,998	-		PFLU_RS31760	0.79	+0.8
4,906,998	-		PFLU_RS31760	0.79	+1.6
4,906,998	-		PFLU_RS31760	0.79	-0.7
4,906,998	-		PFLU_RS31760	0.79	+1.8
4,907,032	+				+2.3
4,907,032	+				+1.3
4,907,032	+				+2.9
4,907,032	+				+2.3
4,907,032	+				+1.3
4,907,033	-				-0.7
4,907,033	-				+1.3
4,907,033	-				+1.9
4,907,033	-				-0.0
4,907,117	+				-1.5
4,907,117	+				-1.1
4,907,117	+				+1.6
4,907,118	-				-1.1
4,907,118	-				+0.0
4,907,118	-				-2.4
4,907,118	-				-1.4
4,907,118	-				+1.8
4,907,122	+				+1.3
4,907,122	+				+0.7
4,907,122	+				+2.0
4,907,122	+				-2.1
4,907,123	-				-3.7
4,907,123	-				-0.8
4,907,123	-				-1.2
4,907,123	-				-1.5
4,907,123	-				-1.2
4,907,123	-				-3.1
4,907,123	-				+0.3
4,907,160	-				+0.8
4,907,245	+		PFLU_RS21795	0.11	+0.5
4,907,245	+		PFLU_RS21795	0.11	+1.6
4,907,245	+		PFLU_RS21795	0.11	-1.4
4,907,245	+		PFLU_RS21795	0.11	+2.5
4,907,245	+		PFLU_RS21795	0.11	+1.3
4,907,245	+		PFLU_RS21795	0.11	-2.1
4,907,246	-		PFLU_RS21795	0.11	+2.1
4,907,246	-		PFLU_RS21795	0.11	-2.6
4,907,303	+		PFLU_RS21795	0.15	-1.0
4,907,303	+		PFLU_RS21795	0.15	-2.6
4,907,304	-		PFLU_RS21795	0.15	-0.1
4,907,380	+		PFLU_RS21795	0.20	+1.6
4,907,381	-		PFLU_RS21795	0.20	+1.1
4,907,422	+		PFLU_RS21795	0.23	-2.8
4,907,423	-		PFLU_RS21795	0.23	-0.9
4,907,474	+		PFLU_RS21795	0.27	+0.3
4,907,474	+		PFLU_RS21795	0.27	-2.1
4,907,474	+		PFLU_RS21795	0.27	+0.3
4,907,474	+		PFLU_RS21795	0.27	-3.1
4,907,474	+		PFLU_RS21795	0.27	-1.7
4,907,474	+		PFLU_RS21795	0.27	-1.9
4,907,474	+		PFLU_RS21795	0.27	-0.9
4,907,475	-		PFLU_RS21795	0.27	-0.2
4,907,475	-		PFLU_RS21795	0.27	+2.2
4,907,475	-		PFLU_RS21795	0.27	-0.2
4,907,475	-		PFLU_RS21795	0.27	+2.0
4,907,475	-		PFLU_RS21795	0.27	+1.1
4,907,475	-		PFLU_RS21795	0.27	+2.9
4,907,475	-		PFLU_RS21795	0.27	-1.2
4,907,475	-		PFLU_RS21795	0.27	+3.0
4,907,628	+		PFLU_RS21795	0.37	+1.8
4,907,628	+		PFLU_RS21795	0.37	-2.8
4,907,628	+		PFLU_RS21795	0.37	-0.1
4,907,628	+		PFLU_RS21795	0.37	+1.3
4,907,628	+		PFLU_RS21795	0.37	+0.3
4,907,628	+		PFLU_RS21795	0.37	+0.1
4,907,628	+		PFLU_RS21795	0.37	-1.7
4,907,628	+		PFLU_RS21795	0.37	-2.6
4,907,628	+		PFLU_RS21795	0.37	+0.7
4,907,628	+		PFLU_RS21795	0.37	+1.3
4,907,629	-		PFLU_RS21795	0.37	-1.5
4,907,629	-		PFLU_RS21795	0.37	+1.3
4,907,629	-		PFLU_RS21795	0.37	-0.7
4,907,629	-		PFLU_RS21795	0.37	-2.0
4,907,629	-		PFLU_RS21795	0.37	-1.4
4,907,629	-		PFLU_RS21795	0.37	+0.6
4,907,629	-		PFLU_RS21795	0.37	-0.7
4,907,629	-		PFLU_RS21795	0.37	+0.4
4,907,629	-		PFLU_RS21795	0.37	-1.3
4,907,629	-		PFLU_RS21795	0.37	+2.0
4,907,629	-		PFLU_RS21795	0.37	+0.4
4,907,629	-		PFLU_RS21795	0.37	-1.4
4,907,629	-		PFLU_RS21795	0.37	+0.1
4,907,641	+		PFLU_RS21795	0.38	+0.7
4,907,641	+		PFLU_RS21795	0.38	-1.0
4,907,641	+		PFLU_RS21795	0.38	-2.6
4,907,644	+		PFLU_RS21795	0.38	+2.1
4,907,644	+		PFLU_RS21795	0.38	-2.1
4,907,644	+		PFLU_RS21795	0.38	+1.7
4,907,644	+		PFLU_RS21795	0.38	-0.5
4,907,644	+		PFLU_RS21795	0.38	-0.2
4,907,644	+		PFLU_RS21795	0.38	-0.8
4,907,644	+		PFLU_RS21795	0.38	-1.7
4,907,644	+		PFLU_RS21795	0.38	+0.8
4,907,715	+		PFLU_RS21795	0.43	+2.7
4,907,715	+		PFLU_RS21795	0.43	+2.6
4,907,715	+		PFLU_RS21795	0.43	-1.1
4,907,715	+		PFLU_RS21795	0.43	-0.8
4,907,715	+		PFLU_RS21795	0.43	+0.3
4,907,715	+		PFLU_RS21795	0.43	-0.2
4,907,715	+		PFLU_RS21795	0.43	+1.7
4,907,715	+		PFLU_RS21795	0.43	+0.6
4,907,715	+		PFLU_RS21795	0.43	+2.0
4,907,715	+		PFLU_RS21795	0.43	-1.7
4,907,715	+		PFLU_RS21795	0.43	-0.6
4,907,715	+		PFLU_RS21795	0.43	+1.0
4,907,715	+		PFLU_RS21795	0.43	-0.3
4,907,715	+		PFLU_RS21795	0.43	-2.4
4,907,715	+		PFLU_RS21795	0.43	-0.7
4,907,715	+		PFLU_RS21795	0.43	+1.7
4,907,715	+		PFLU_RS21795	0.43	+2.1
4,907,715	+		PFLU_RS21795	0.43	-1.4
4,907,715	+		PFLU_RS21795	0.43	+1.2
4,907,715	+		PFLU_RS21795	0.43	+0.3
4,907,715	+		PFLU_RS21795	0.43	-0.8
4,907,715	+		PFLU_RS21795	0.43	+0.4
4,907,715	+		PFLU_RS21795	0.43	+0.3
4,907,715	+		PFLU_RS21795	0.43	-2.9
4,907,715	+		PFLU_RS21795	0.43	-0.6
4,907,715	+		PFLU_RS21795	0.43	-2.3
4,907,715	+		PFLU_RS21795	0.43	-1.2
4,907,715	+		PFLU_RS21795	0.43	+0.1
4,907,715	+		PFLU_RS21795	0.43	-0.7
4,907,716	-		PFLU_RS21795	0.43	-2.2
4,907,716	-		PFLU_RS21795	0.43	+0.8
4,907,716	-		PFLU_RS21795	0.43	-0.6
4,907,716	-		PFLU_RS21795	0.43	-0.7
4,907,716	-		PFLU_RS21795	0.43	+0.9
4,907,716	-		PFLU_RS21795	0.43	-2.2
4,907,716	-		PFLU_RS21795	0.43	+0.3
4,907,716	-		PFLU_RS21795	0.43	-3.6
4,907,716	-		PFLU_RS21795	0.43	-0.8
4,907,716	-		PFLU_RS21795	0.43	-0.9
4,907,716	-		PFLU_RS21795	0.43	+0.8
4,907,716	-		PFLU_RS21795	0.43	-3.8
4,907,716	-		PFLU_RS21795	0.43	-1.5
4,907,716	-		PFLU_RS21795	0.43	+3.0
4,907,716	-		PFLU_RS21795	0.43	-3.1
4,907,716	-		PFLU_RS21795	0.43	-0.4
4,907,716	-		PFLU_RS21795	0.43	-1.5
4,907,716	-		PFLU_RS21795	0.43	-0.2
4,907,716	-		PFLU_RS21795	0.43	+2.1
4,907,716	-		PFLU_RS21795	0.43	-1.4
4,907,716	-		PFLU_RS21795	0.43	-2.8
4,907,716	-		PFLU_RS21795	0.43	-1.2
4,907,716	-		PFLU_RS21795	0.43	-1.7