Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07000

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
1,565,575	+		PFLU_RS06995	0.27	+0.8
1,565,575	+		PFLU_RS06995	0.27	-1.4
1,565,575	+		PFLU_RS06995	0.27	+1.9
1,565,575	+		PFLU_RS06995	0.27	-0.6
1,565,575	+		PFLU_RS06995	0.27	-2.6
1,565,575	+		PFLU_RS06995	0.27	+0.8
1,565,576	-		PFLU_RS06995	0.27	+0.3
1,565,576	-		PFLU_RS06995	0.27	+1.3
1,565,576	-		PFLU_RS06995	0.27	+1.6
1,565,576	-		PFLU_RS06995	0.27	+1.0
1,565,632	+		PFLU_RS06995	0.31	+1.7
1,565,632	+		PFLU_RS06995	0.31	-1.5
1,565,632	+		PFLU_RS06995	0.31	+0.4
1,565,632	+		PFLU_RS06995	0.31	-0.9
1,565,632	+		PFLU_RS06995	0.31	-2.7
1,565,632	+		PFLU_RS06995	0.31	-2.3
1,565,632	+		PFLU_RS06995	0.31	-1.8
1,565,633	-		PFLU_RS06995	0.31	+0.4
1,565,633	-		PFLU_RS06995	0.31	+1.3
1,565,633	-		PFLU_RS06995	0.31	-2.0
1,565,633	-		PFLU_RS06995	0.31	-1.6
1,565,633	-		PFLU_RS06995	0.31	+4.7
1,565,633	-		PFLU_RS06995	0.31	-0.5
1,565,633	-		PFLU_RS06995	0.31	+1.0
1,565,633	-		PFLU_RS06995	0.31	+1.6
1,565,633	-		PFLU_RS06995	0.31	+1.3
1,565,635	+		PFLU_RS06995	0.32	-1.4
1,565,635	+		PFLU_RS06995	0.32	+2.5
1,565,635	+		PFLU_RS06995	0.32	-2.2
1,565,635	+		PFLU_RS06995	0.32	-1.0
1,565,636	-		PFLU_RS06995	0.32	-0.3
1,565,636	-		PFLU_RS06995	0.32	+1.3
1,565,636	-		PFLU_RS06995	0.32	-1.2
1,565,636	-		PFLU_RS06995	0.32	-1.9
1,565,636	-		PFLU_RS06995	0.32	+1.5
1,565,673	+		PFLU_RS06995	0.34	-0.5
1,565,673	+		PFLU_RS06995	0.34	+3.3
1,565,673	+		PFLU_RS06995	0.34	+0.5
1,565,673	+		PFLU_RS06995	0.34	-0.5
1,565,674	-		PFLU_RS06995	0.34	-0.2
1,565,674	-		PFLU_RS06995	0.34	-1.1
1,565,856	+		PFLU_RS06995	0.48	-1.1
1,565,991	+		PFLU_RS06995	0.58	-1.3
1,565,991	+		PFLU_RS06995	0.58	+0.8
1,565,992	-		PFLU_RS06995	0.58	+1.4
1,565,992	-		PFLU_RS06995	0.58	-2.0
1,565,992	-		PFLU_RS06995	0.58	+1.6
1,565,995	+		PFLU_RS06995	0.59	+1.0
1,565,995	+		PFLU_RS06995	0.59	+2.6
1,565,995	+		PFLU_RS06995	0.59	+3.3
1,565,995	+		PFLU_RS06995	0.59	-1.4
1,565,995	+		PFLU_RS06995	0.59	-0.5
1,565,995	+		PFLU_RS06995	0.59	-0.2
1,565,995	+		PFLU_RS06995	0.59	-2.0
1,565,995	+		PFLU_RS06995	0.59	-2.5
1,565,996	-		PFLU_RS06995	0.59	+1.4
1,565,996	-		PFLU_RS06995	0.59	+2.6
1,565,996	-		PFLU_RS06995	0.59	+0.2
1,565,996	-		PFLU_RS06995	0.59	-1.7
1,565,996	-		PFLU_RS06995	0.59	-0.5
1,565,996	-		PFLU_RS06995	0.59	-1.1
1,565,996	-		PFLU_RS06995	0.59	-0.3
1,565,996	-		PFLU_RS06995	0.59	-2.0
1,565,996	-		PFLU_RS06995	0.59	-2.5
1,565,996	-		PFLU_RS06995	0.59	+2.3
1,565,996	-		PFLU_RS06995	0.59	-0.2
1,566,106	+		PFLU_RS06995	0.67	-1.2
1,566,106	+		PFLU_RS06995	0.67	-0.8
1,566,106	+		PFLU_RS06995	0.67	-2.0
1,566,106	+		PFLU_RS06995	0.67	-2.4
1,566,106	+		PFLU_RS06995	0.67	-2.0
1,566,106	+		PFLU_RS06995	0.67	+3.3
1,566,106	+		PFLU_RS06995	0.67	-0.7
1,566,106	+		PFLU_RS06995	0.67	-0.6
1,566,106	+		PFLU_RS06995	0.67	-1.7
1,566,106	+		PFLU_RS06995	0.67	-3.0
1,566,106	+		PFLU_RS06995	0.67	+2.3
1,566,106	+		PFLU_RS06995	0.67	-1.4
1,566,106	+		PFLU_RS06995	0.67	+0.7
1,566,106	+		PFLU_RS06995	0.67	+0.9
1,566,106	+		PFLU_RS06995	0.67	-1.2
1,566,106	+		PFLU_RS06995	0.67	-0.6
1,566,106	+		PFLU_RS06995	0.67	-2.3
1,566,106	+		PFLU_RS06995	0.67	-2.6
1,566,106	+		PFLU_RS06995	0.67	-1.8
1,566,106	+		PFLU_RS06995	0.67	+2.5
1,566,107	-		PFLU_RS06995	0.67	-0.3
1,566,107	-		PFLU_RS06995	0.67	-1.6
1,566,107	-		PFLU_RS06995	0.67	-1.5
1,566,107	-		PFLU_RS06995	0.67	+0.3
1,566,107	-		PFLU_RS06995	0.67	+2.7
1,566,107	-		PFLU_RS06995	0.67	-2.0
1,566,107	-		PFLU_RS06995	0.67	+0.4
1,566,107	-		PFLU_RS06995	0.67	-1.3
1,566,107	-		PFLU_RS06995	0.67	+1.5
1,566,107	-		PFLU_RS06995	0.67	-0.3
1,566,107	-		PFLU_RS06995	0.67	-2.0
1,566,107	-		PFLU_RS06995	0.67	+0.3
1,566,107	-		PFLU_RS06995	0.67	-1.2
1,566,107	-		PFLU_RS06995	0.67	-2.0
1,566,107	-		PFLU_RS06995	0.67	+0.8
1,566,126	+		PFLU_RS06995	0.68	-0.2
1,566,126	+		PFLU_RS06995	0.68	-0.9
1,566,126	+		PFLU_RS06995	0.68	+1.5
1,566,126	+		PFLU_RS06995	0.68	-0.5
1,566,126	+		PFLU_RS06995	0.68	-0.3
1,566,126	+		PFLU_RS06995	0.68	-2.5
1,566,127	-		PFLU_RS06995	0.68	+0.0
1,566,127	-		PFLU_RS06995	0.68	-1.0
1,566,127	-		PFLU_RS06995	0.68	-2.1
1,566,360	+		PFLU_RS06995	0.86	+1.1
1,566,375	+		PFLU_RS06995	0.87	-2.4
1,566,417	-				+0.8
1,566,417	-				+1.3
1,566,417	-				-2.0
1,566,460	+				-0.3
1,566,460	+				-1.4
1,566,460	+				-0.3
1,566,460	+				-0.3
1,566,461	-				-0.7
1,566,461	-				-3.1
1,566,461	-				-2.2
1,566,461	-				-2.9
1,566,461	-				-2.1
1,566,461	-				-2.8
1,566,461	-				-0.7
1,566,473	+				-0.7
1,566,473	+				-0.9
1,566,474	-				-1.0
1,566,474	-				-1.5
1,566,474	-				-1.3
1,566,474	-				-2.2
1,566,601	+		PFLU_RS07000	0.11	+5.2
1,566,601	+		PFLU_RS07000	0.11	+2.9
1,566,602	-		PFLU_RS07000	0.11	-0.5
1,566,602	-		PFLU_RS07000	0.11	+2.5
1,566,602	-		PFLU_RS07000	0.11	+1.9
1,566,602	-		PFLU_RS07000	0.11	-1.3
1,566,760	+		PFLU_RS07000	0.44	+1.2
1,566,760	+		PFLU_RS07000	0.44	+1.6
1,566,760	+		PFLU_RS07000	0.44	-1.1
1,566,761	-		PFLU_RS07000	0.44	+1.7
1,566,761	-		PFLU_RS07000	0.44	+2.3
1,566,761	-		PFLU_RS07000	0.44	+3.0
1,566,777	+		PFLU_RS07000	0.47	-1.6
1,566,778	-		PFLU_RS07000	0.47	+1.3
1,566,778	-		PFLU_RS07000	0.47	-0.6
1,566,832	-		PFLU_RS07000	0.58	-0.1
1,566,960	+		PFLU_RS07000	0.84	+2.3
1,566,960	+		PFLU_RS07000	0.84	+1.5
1,566,961	-		PFLU_RS07000	0.85	-0.7
1,566,961	-		PFLU_RS07000	0.85	-1.6
1,566,961	-		PFLU_RS07000	0.85	-0.0
1,566,961	-		PFLU_RS07000	0.85	+0.5
1,566,961	-		PFLU_RS07000	0.85	+3.0
1,567,010	-				-0.7
1,567,068	-				-0.3
1,567,364	+		PFLU_RS07005	0.28	-0.3
1,567,364	+		PFLU_RS07005	0.28	+0.7
1,567,364	+		PFLU_RS07005	0.28	+3.2
1,567,364	+		PFLU_RS07005	0.28	+0.4
1,567,364	+		PFLU_RS07005	0.28	-1.3
1,567,365	-		PFLU_RS07005	0.28	-0.0
1,567,365	-		PFLU_RS07005	0.28	+1.3
1,567,365	-		PFLU_RS07005	0.28	+3.0
1,567,365	-		PFLU_RS07005	0.28	-0.0
1,567,365	-		PFLU_RS07005	0.28	+3.6
1,567,438	+		PFLU_RS07005	0.36	-0.9
1,567,438	+		PFLU_RS07005	0.36	+0.8
1,567,438	+		PFLU_RS07005	0.36	-1.7
1,567,438	+		PFLU_RS07005	0.36	-0.0
1,567,438	+		PFLU_RS07005	0.36	-2.7
1,567,438	+		PFLU_RS07005	0.36	+2.3
1,567,438	+		PFLU_RS07005	0.36	+0.3
1,567,439	-		PFLU_RS07005	0.36	+2.6
1,567,439	-		PFLU_RS07005	0.36	-2.0
1,567,439	-		PFLU_RS07005	0.36	-1.4
1,567,458	-		PFLU_RS07005	0.38	-2.1
1,567,473	+		PFLU_RS07005	0.40	+2.3
1,567,473	+		PFLU_RS07005	0.40	-2.7
1,567,473	+		PFLU_RS07005	0.40	-1.4
1,567,473	+		PFLU_RS07005	0.40	+1.8
1,567,473	+		PFLU_RS07005	0.40	+0.7
1,567,473	+		PFLU_RS07005	0.40	-1.9
1,567,473	+		PFLU_RS07005	0.40	-0.6
1,567,473	+		PFLU_RS07005	0.40	-2.5
1,567,473	+		PFLU_RS07005	0.40	-1.6
1,567,473	+		PFLU_RS07005	0.40	+1.3
1,567,473	+		PFLU_RS07005	0.40	-0.3
1,567,473	+		PFLU_RS07005	0.40	-1.4
1,567,473	+		PFLU_RS07005	0.40	+1.5
1,567,473	+		PFLU_RS07005	0.40	-0.3
1,567,474	-		PFLU_RS07005	0.40	+2.5
1,567,474	-		PFLU_RS07005	0.40	+4.0
1,567,474	-		PFLU_RS07005	0.40	-1.6
1,567,474	-		PFLU_RS07005	0.40	+2.3
1,567,474	-		PFLU_RS07005	0.40	-0.5
1,567,474	-		PFLU_RS07005	0.40	+0.7
1,567,474	-		PFLU_RS07005	0.40	-2.0
1,567,474	-		PFLU_RS07005	0.40	-0.8
1,567,474	-		PFLU_RS07005	0.40	+1.5
1,567,474	-		PFLU_RS07005	0.40	-1.7
1,567,474	-		PFLU_RS07005	0.40	+1.7
1,567,474	-		PFLU_RS07005	0.40	-1.4
1,567,474	-		PFLU_RS07005	0.40	-1.7
1,567,474	-		PFLU_RS07005	0.40	-0.7
1,567,611	+		PFLU_RS07005	0.55	-1.7
1,567,611	+		PFLU_RS07005	0.55	+2.6
1,567,611	+		PFLU_RS07005	0.55	+1.7
1,567,611	+		PFLU_RS07005	0.55	-1.5
1,567,611	+		PFLU_RS07005	0.55	+0.8
1,567,612	-		PFLU_RS07005	0.55	-1.7
1,567,612	-		PFLU_RS07005	0.55	-1.5
1,567,612	-		PFLU_RS07005	0.55	-1.6
1,567,612	-		PFLU_RS07005	0.55	-2.5
1,567,612	-		PFLU_RS07005	0.55	-0.0
1,567,633	+		PFLU_RS07005	0.58	+2.4
1,567,633	+		PFLU_RS07005	0.58	+0.8
1,567,633	+		PFLU_RS07005	0.58	+0.7
1,567,633	+		PFLU_RS07005	0.58	+0.5
1,567,633	+		PFLU_RS07005	0.58	-0.8
1,567,633	+		PFLU_RS07005	0.58	-0.9
1,567,633	+		PFLU_RS07005	0.58	-0.3
1,567,633	+		PFLU_RS07005	0.58	-1.4
1,567,633	+		PFLU_RS07005	0.58	-2.2
1,567,633	+		PFLU_RS07005	0.58	-2.7
1,567,633	+		PFLU_RS07005	0.58	-1.0
1,567,633	+		PFLU_RS07005	0.58	+2.2
1,567,633	+		PFLU_RS07005	0.58	+1.7
1,567,633	+		PFLU_RS07005	0.58	-0.9
1,567,633	+		PFLU_RS07005	0.58	-1.3
1,567,633	+		PFLU_RS07005	0.58	-1.1
1,567,633	+		PFLU_RS07005	0.58	-1.8
1,567,634	-		PFLU_RS07005	0.58	-0.5
1,567,634	-		PFLU_RS07005	0.58	-1.0
1,567,634	-		PFLU_RS07005	0.58	-1.4
1,567,634	-		PFLU_RS07005	0.58	+2.9
1,567,634	-		PFLU_RS07005	0.58	-0.2
1,567,634	-		PFLU_RS07005	0.58	+2.5
1,567,634	-		PFLU_RS07005	0.58	-0.9
1,567,634	-		PFLU_RS07005	0.58	+0.3
1,567,634	-		PFLU_RS07005	0.58	-0.6
1,567,634	-		PFLU_RS07005	0.58	+3.2
1,567,634	-		PFLU_RS07005	0.58	-2.5
1,567,634	-		PFLU_RS07005	0.58	+0.4
1,567,634	-		PFLU_RS07005	0.58	-0.3
1,567,634	-		PFLU_RS07005	0.58	+0.3
1,567,634	-		PFLU_RS07005	0.58	-0.5
1,567,656	+		PFLU_RS07005	0.60	+0.7
1,567,657	-		PFLU_RS07005	0.60	-1.7
1,567,657	-		PFLU_RS07005	0.60	+0.3
1,567,657	-		PFLU_RS07005	0.60	+2.4
1,567,685	+		PFLU_RS07005	0.63	+1.5
1,567,685	+		PFLU_RS07005	0.63	-0.6
1,567,685	+		PFLU_RS07005	0.63	+2.7
1,567,686	-		PFLU_RS07005	0.63	+2.6
1,567,686	-		PFLU_RS07005	0.63	+2.4
1,567,686	-		PFLU_RS07005	0.63	-1.6
1,567,686	-		PFLU_RS07005	0.63	-1.5
1,567,693	+		PFLU_RS07005	0.64	-1.3
1,567,693	+		PFLU_RS07005	0.64	-0.0
1,567,693	+		PFLU_RS07005	0.64	+0.5
1,567,693	+		PFLU_RS07005	0.64	-2.5
1,567,693	+		PFLU_RS07005	0.64	-1.0
1,567,693	+		PFLU_RS07005	0.64	-1.7
1,567,693	+		PFLU_RS07005	0.64	-2.3
1,567,693	+		PFLU_RS07005	0.64	-1.6
1,567,694	-		PFLU_RS07005	0.64	-1.5
1,567,694	-		PFLU_RS07005	0.64	+1.4
1,567,694	-		PFLU_RS07005	0.64	+0.7
1,567,694	-		PFLU_RS07005	0.64	-0.9
1,567,694	-		PFLU_RS07005	0.64	-1.0
1,567,694	-		PFLU_RS07005	0.64	-0.9
1,567,694	-		PFLU_RS07005	0.64	-0.0
1,567,694	-		PFLU_RS07005	0.64	-2.8
1,567,694	-		PFLU_RS07005	0.64	-2.9
1,567,712	+		PFLU_RS07005	0.66	-0.0
1,567,712	+		PFLU_RS07005	0.66	-0.3
1,567,712	+		PFLU_RS07005	0.66	+0.9
1,567,712	+		PFLU_RS07005	0.66	+1.0
1,567,712	+		PFLU_RS07005	0.66	+1.3
1,567,712	+		PFLU_RS07005	0.66	+2.3
1,567,712	+		PFLU_RS07005	0.66	-0.5
1,567,712	+		PFLU_RS07005	0.66	-0.0
1,567,712	+		PFLU_RS07005	0.66	-2.0
1,567,712	+		PFLU_RS07005	0.66	-0.3
1,567,712	+		PFLU_RS07005	0.66	-1.7
1,567,712	+		PFLU_RS07005	0.66	-1.0
1,567,712	+		PFLU_RS07005	0.66	-2.2
1,567,712	+		PFLU_RS07005	0.66	-1.5
1,567,712	+		PFLU_RS07005	0.66	-0.3
1,567,712	+		PFLU_RS07005	0.66	+2.0
1,567,712	+		PFLU_RS07005	0.66	-0.5
1,567,712	+		PFLU_RS07005	0.66	-0.6
1,567,712	+		PFLU_RS07005	0.66	-0.5
1,567,712	+		PFLU_RS07005	0.66	+0.8
1,567,712	+		PFLU_RS07005	0.66	-1.2
1,567,712	+		PFLU_RS07005	0.66	-1.0
1,567,712	+		PFLU_RS07005	0.66	-0.7
1,567,712	+		PFLU_RS07005	0.66	+2.3
1,567,712	+		PFLU_RS07005	0.66	+0.7
1,567,712	+		PFLU_RS07005	0.66	-0.0
1,567,712	+		PFLU_RS07005	0.66	-1.4
1,567,712	+		PFLU_RS07005	0.66	+0.5
1,567,712	+		PFLU_RS07005	0.66	+1.7
1,567,712	+		PFLU_RS07005	0.66	+1.5
1,567,712	+		PFLU_RS07005	0.66	+3.1
1,567,712	+		PFLU_RS07005	0.66	+0.5
1,567,712	+		PFLU_RS07005	0.66	-1.0
1,567,712	+		PFLU_RS07005	0.66	+2.3
1,567,712	+		PFLU_RS07005	0.66	-1.0
1,567,713	-		PFLU_RS07005	0.66	+2.6
1,567,713	-		PFLU_RS07005	0.66	-2.2
1,567,713	-		PFLU_RS07005	0.66	-1.6
1,567,713	-		PFLU_RS07005	0.66	-2.2
1,567,713	-		PFLU_RS07005	0.66	-0.4
1,567,713	-		PFLU_RS07005	0.66	+2.7
1,567,713	-		PFLU_RS07005	0.66	-0.6
1,567,713	-		PFLU_RS07005	0.66	-1.4
1,567,713	-		PFLU_RS07005	0.66	+2.6
1,567,713	-		PFLU_RS07005	0.66	+0.8
1,567,713	-		PFLU_RS07005	0.66	+4.0
1,567,713	-		PFLU_RS07005	0.66	+0.0
1,567,713	-		PFLU_RS07005	0.66	-0.2
1,567,713	-		PFLU_RS07005	0.66	+1.6
1,567,713	-		PFLU_RS07005	0.66	+1.5
1,567,713	-		PFLU_RS07005	0.66	-2.2
1,567,713	-		PFLU_RS07005	0.66	+0.5
1,567,713	-		PFLU_RS07005	0.66	-3.0
1,567,713	-		PFLU_RS07005	0.66	+2.6
1,567,713	-		PFLU_RS07005	0.66	+0.3
1,567,713	-		PFLU_RS07005	0.66	-0.4
1,567,713	-		PFLU_RS07005	0.66	-2.8
1,567,713	-		PFLU_RS07005	0.66	-0.1
1,567,713	-		PFLU_RS07005	0.66	+2.7
1,567,713	-		PFLU_RS07005	0.66	+3.2
1,567,713	-		PFLU_RS07005	0.66	+2.3
1,567,713	-		PFLU_RS07005	0.66	+0.9
1,567,713	-		PFLU_RS07005	0.66	-0.3
1,567,713	-		PFLU_RS07005	0.66	-0.8
1,567,713	-		PFLU_RS07005	0.66	-0.3
1,567,713	-		PFLU_RS07005	0.66	-2.7
1,567,713	-		PFLU_RS07005	0.66	+1.6
1,567,851	+		PFLU_RS07005	0.81	-1.2
1,567,851	+		PFLU_RS07005	0.81	+0.1
1,567,852	-		PFLU_RS07005	0.81	+0.7
1,567,852	-		PFLU_RS07005	0.81	-0.8
1,567,921	-		PFLU_RS07005	0.89	-1.1
1,567,921	-		PFLU_RS07005	0.89	+3.3