Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06520

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
1,456,705	+				-0.6
1,456,705	+				-1.5
1,456,705	+				+2.9
1,456,705	+				-1.1
1,456,706	-				+4.3
1,456,706	-				-1.0
1,456,706	-				+3.0
1,456,736	+		PFLU_RS06510	0.14	-1.7
1,456,747	+		PFLU_RS06510	0.16	-0.0
1,456,747	+		PFLU_RS06510	0.16	+0.4
1,456,747	+		PFLU_RS06510	0.16	-2.2
1,456,747	+		PFLU_RS06510	0.16	-1.7
1,456,748	-		PFLU_RS06510	0.16	+0.7
1,456,748	-		PFLU_RS06510	0.16	-2.9
1,456,748	-		PFLU_RS06510	0.16	-2.4
1,456,748	-		PFLU_RS06510	0.16	+1.4
1,456,842	+		PFLU_RS06510	0.36	-0.7
1,456,842	+		PFLU_RS06510	0.36	-1.0
1,456,843	-		PFLU_RS06510	0.36	+1.7
1,456,843	-		PFLU_RS06510	0.36	+1.4
1,456,843	-		PFLU_RS06510	0.36	-0.4
1,456,869	+		PFLU_RS06510	0.41	-1.2
1,456,869	+		PFLU_RS06510	0.41	-1.5
1,456,870	-		PFLU_RS06510	0.42	-0.5
1,456,870	-		PFLU_RS06510	0.42	-2.0
1,456,870	-		PFLU_RS06510	0.42	-3.0
1,456,870	-		PFLU_RS06510	0.42	-1.1
1,456,870	-		PFLU_RS06510	0.42	-2.0
1,456,946	+		PFLU_RS06510	0.57	+1.6
1,456,946	+		PFLU_RS06510	0.57	-0.0
1,456,946	+		PFLU_RS06510	0.57	-2.1
1,456,946	+		PFLU_RS06510	0.57	-1.0
1,456,946	+		PFLU_RS06510	0.57	-1.0
1,456,946	+		PFLU_RS06510	0.57	+2.2
1,456,946	+		PFLU_RS06510	0.57	-2.0
1,456,946	+		PFLU_RS06510	0.57	-2.6
1,456,946	+		PFLU_RS06510	0.57	+1.7
1,456,946	+		PFLU_RS06510	0.57	-1.3
1,456,946	+		PFLU_RS06510	0.57	-0.4
1,456,947	-		PFLU_RS06510	0.58	-2.3
1,456,947	-		PFLU_RS06510	0.58	+1.6
1,456,947	-		PFLU_RS06510	0.58	+1.3
1,456,947	-		PFLU_RS06510	0.58	+3.5
1,456,947	-		PFLU_RS06510	0.58	-1.2
1,456,947	-		PFLU_RS06510	0.58	+2.8
1,457,000	+		PFLU_RS06510	0.69	+0.8
1,457,000	+		PFLU_RS06510	0.69	-1.8
1,457,001	-		PFLU_RS06510	0.69	-2.1
1,457,001	-		PFLU_RS06510	0.69	+1.1
1,457,138	+				-2.0
1,457,138	+				+0.4
1,457,138	+				-1.0
1,457,138	+				-0.1
1,457,138	+				+0.6
1,457,138	+				+0.7
1,457,138	+				-1.1
1,457,138	+				-2.3
1,457,138	+				+1.9
1,457,138	+				+1.1
1,457,138	+				+3.2
1,457,138	+				-3.0
1,457,138	+				+3.4
1,457,138	+				+0.6
1,457,139	-				+0.0
1,457,139	-				-1.0
1,457,139	-				+1.1
1,457,139	-				+3.1
1,457,139	-				+1.0
1,457,139	-				-0.4
1,457,139	-				+0.6
1,457,139	-				+3.6
1,457,139	-				-2.3
1,457,173	-				-1.5
1,457,178	+				-1.0
1,457,178	+				+0.8
1,457,178	+				+1.7
1,457,178	+				-1.7
1,457,178	+				+2.4
1,457,178	+				+1.7
1,457,178	+				+1.4
1,457,178	+				-2.3
1,457,178	+				-0.8
1,457,178	+				+0.2
1,457,179	-				-0.4
1,457,179	-				-2.2
1,457,179	-				+2.0
1,457,179	-				-2.0
1,457,179	-				-2.0
1,457,179	-				+0.2
1,457,179	-				-0.6
1,457,179	-				-2.0
1,457,271	+		PFLU_RS06515	0.21	-2.0
1,457,271	+		PFLU_RS06515	0.21	-1.2
1,457,272	-		PFLU_RS06515	0.21	+1.7
1,457,272	-		PFLU_RS06515	0.21	-0.8
1,457,272	-		PFLU_RS06515	0.21	-0.6
1,457,272	-		PFLU_RS06515	0.21	-0.5
1,457,272	-		PFLU_RS06515	0.21	-1.6
1,457,272	-		PFLU_RS06515	0.21	-1.7
1,457,272	-		PFLU_RS06515	0.21	-0.4
1,457,272	-		PFLU_RS06515	0.21	-1.2
1,457,272	-		PFLU_RS06515	0.21	-2.0
1,457,291	+		PFLU_RS06515	0.25	+1.4
1,457,291	+		PFLU_RS06515	0.25	+0.6
1,457,317	+		PFLU_RS06515	0.31	-1.2
1,457,317	+		PFLU_RS06515	0.31	+2.6
1,457,317	+		PFLU_RS06515	0.31	+3.1
1,457,317	+		PFLU_RS06515	0.31	-2.8
1,457,317	+		PFLU_RS06515	0.31	-0.8
1,457,317	+		PFLU_RS06515	0.31	-1.2
1,457,317	+		PFLU_RS06515	0.31	+2.6
1,457,317	+		PFLU_RS06515	0.31	+2.2
1,457,317	+		PFLU_RS06515	0.31	-0.2
1,457,317	+		PFLU_RS06515	0.31	+0.5
1,457,317	+		PFLU_RS06515	0.31	-0.4
1,457,318	-		PFLU_RS06515	0.31	+0.4
1,457,318	-		PFLU_RS06515	0.31	+1.5
1,457,318	-		PFLU_RS06515	0.31	-0.3
1,457,318	-		PFLU_RS06515	0.31	-1.7
1,457,318	-		PFLU_RS06515	0.31	-1.5
1,457,318	-		PFLU_RS06515	0.31	+0.4
1,457,318	-		PFLU_RS06515	0.31	-1.8
1,457,485	+		PFLU_RS06515	0.67	-1.8
1,457,485	+		PFLU_RS06515	0.67	-2.8
1,457,485	+		PFLU_RS06515	0.67	-0.2
1,457,486	-		PFLU_RS06515	0.67	+1.0
1,457,486	-		PFLU_RS06515	0.67	-0.1
1,457,486	-		PFLU_RS06515	0.67	+1.4
1,457,486	-		PFLU_RS06515	0.67	+0.8
1,457,486	-		PFLU_RS06515	0.67	+1.3
1,457,486	-		PFLU_RS06515	0.67	-2.0
1,457,488	+		PFLU_RS06515	0.67	+1.3
1,457,488	+		PFLU_RS06515	0.67	+0.0
1,457,489	-		PFLU_RS06515	0.68	+0.4
1,457,495	+		PFLU_RS06515	0.69	+0.1
1,457,495	+		PFLU_RS06515	0.69	-1.2
1,457,495	+		PFLU_RS06515	0.69	+1.7
1,457,495	+		PFLU_RS06515	0.69	-0.5
1,457,495	+		PFLU_RS06515	0.69	-2.1
1,457,495	+		PFLU_RS06515	0.69	-0.9
1,457,495	+		PFLU_RS06515	0.69	-2.1
1,457,495	+		PFLU_RS06515	0.69	+2.5
1,457,495	+		PFLU_RS06515	0.69	-0.7
1,457,495	+		PFLU_RS06515	0.69	-0.2
1,457,495	+		PFLU_RS06515	0.69	+2.2
1,457,495	+		PFLU_RS06515	0.69	-0.5
1,457,495	+		PFLU_RS06515	0.69	+0.6
1,457,495	+		PFLU_RS06515	0.69	+1.0
1,457,496	-		PFLU_RS06515	0.69	-0.3
1,457,496	-		PFLU_RS06515	0.69	-0.3
1,457,496	-		PFLU_RS06515	0.69	+0.8
1,457,496	-		PFLU_RS06515	0.69	-0.7
1,457,496	-		PFLU_RS06515	0.69	+0.6
1,457,496	-		PFLU_RS06515	0.69	+0.6
1,457,496	-		PFLU_RS06515	0.69	+1.2
1,457,496	-		PFLU_RS06515	0.69	-1.5
1,457,496	-		PFLU_RS06515	0.69	+1.9
1,457,499	+		PFLU_RS06515	0.70	+1.0
1,457,499	+		PFLU_RS06515	0.70	+0.7
1,457,499	+		PFLU_RS06515	0.70	+2.4
1,457,499	+		PFLU_RS06515	0.70	+0.5
1,457,500	-		PFLU_RS06515	0.70	-1.9
1,457,500	-		PFLU_RS06515	0.70	-1.5
1,457,500	-		PFLU_RS06515	0.70	+1.0
1,457,500	-		PFLU_RS06515	0.70	-1.6
1,457,520	+		PFLU_RS06515	0.74	-1.8
1,457,520	+		PFLU_RS06515	0.74	+0.0
1,457,521	-		PFLU_RS06515	0.74	+0.9
1,457,521	-		PFLU_RS06515	0.74	+1.5
1,457,521	-		PFLU_RS06515	0.74	+1.8
1,457,529	+		PFLU_RS06515	0.76	-0.8
1,457,580	+		PFLU_RS06515	0.87	+1.0
1,457,581	-		PFLU_RS06515	0.87	+0.4
1,457,635	+				-1.2
1,457,635	+				+1.0
1,457,635	+				+3.4
1,457,635	+				+0.0
1,457,635	+				-0.4
1,457,635	+				-0.2
1,457,635	+				-0.0
1,457,635	+				+0.7
1,457,635	+				-3.1
1,457,635	+				+0.0
1,457,635	+				+1.6
1,457,635	+				-2.2
1,457,635	+				-2.0
1,457,635	+				-0.2
1,457,635	+				+1.2
1,457,635	+				+0.7
1,457,635	+				-2.2
1,457,635	+				+3.0
1,457,635	+				+0.8
1,457,635	+				+0.8
1,457,636	-				+2.1
1,457,636	-				+0.9
1,457,636	-				-0.4
1,457,636	-				-0.4
1,457,636	-				-1.4
1,457,636	-				+0.8
1,457,636	-				-0.3
1,457,636	-				+0.3
1,457,636	-				-2.2
1,457,636	-				+2.4
1,457,636	-				-2.5
1,457,636	-				+0.8
1,457,636	-				-1.4
1,457,636	-				-0.2
1,457,647	+				+2.0
1,457,656	+				+1.7
1,457,656	+				-0.4
1,457,656	+				+2.1
1,457,656	+				+0.0
1,457,656	+				+1.7
1,457,656	+				-1.8
1,457,657	-				+1.4
1,457,657	-				+1.5
1,457,657	-				-1.4
1,457,657	-				+2.8
1,457,657	-				+3.0
1,457,657	-				+2.7
1,457,657	-				-2.5
1,457,657	-				+2.7
1,457,717	+		PFLU_RS06520	0.14	-0.2
1,457,717	+		PFLU_RS06520	0.14	-1.8
1,457,717	+		PFLU_RS06520	0.14	+0.9
1,457,717	+		PFLU_RS06520	0.14	-1.4
1,457,717	+		PFLU_RS06520	0.14	-1.3
1,457,717	+		PFLU_RS06520	0.14	-0.8
1,457,717	+		PFLU_RS06520	0.14	+2.4
1,457,717	+		PFLU_RS06520	0.14	-1.1
1,457,717	+		PFLU_RS06520	0.14	+2.3
1,457,717	+		PFLU_RS06520	0.14	+0.0
1,457,717	+		PFLU_RS06520	0.14	-0.6
1,457,717	+		PFLU_RS06520	0.14	+1.2
1,457,718	-		PFLU_RS06520	0.14	-1.7
1,457,718	-		PFLU_RS06520	0.14	-1.1
1,457,718	-		PFLU_RS06520	0.14	+0.6
1,457,718	-		PFLU_RS06520	0.14	-1.9
1,457,718	-		PFLU_RS06520	0.14	-1.9
1,457,718	-		PFLU_RS06520	0.14	+0.0
1,457,718	-		PFLU_RS06520	0.14	-0.0
1,457,719	+		PFLU_RS06520	0.15	-1.9
1,457,719	+		PFLU_RS06520	0.15	-1.1
1,457,719	+		PFLU_RS06520	0.15	-0.0
1,457,719	+		PFLU_RS06520	0.15	-0.6
1,457,720	-		PFLU_RS06520	0.15	-1.4
1,457,720	-		PFLU_RS06520	0.15	+2.0
1,457,720	-		PFLU_RS06520	0.15	-0.6
1,457,720	-		PFLU_RS06520	0.15	-1.1
1,457,720	-		PFLU_RS06520	0.15	+1.4
1,457,720	-		PFLU_RS06520	0.15	-1.9
1,457,734	+		PFLU_RS06520	0.18	+2.1
1,457,734	+		PFLU_RS06520	0.18	+0.4
1,457,734	+		PFLU_RS06520	0.18	-0.6
1,457,734	+		PFLU_RS06520	0.18	+2.0
1,457,735	-		PFLU_RS06520	0.18	-2.1
1,457,735	-		PFLU_RS06520	0.18	+0.7
1,457,735	-		PFLU_RS06520	0.18	+1.4
1,457,738	+		PFLU_RS06520	0.18	+0.1
1,457,738	+		PFLU_RS06520	0.18	-2.0
1,457,738	+		PFLU_RS06520	0.18	-1.1
1,457,738	+		PFLU_RS06520	0.18	+0.0
1,457,739	-		PFLU_RS06520	0.19	-0.8
1,457,739	-		PFLU_RS06520	0.19	-2.0
1,457,739	-		PFLU_RS06520	0.19	+0.0
1,457,739	-		PFLU_RS06520	0.19	-1.0
1,457,739	-		PFLU_RS06520	0.19	-1.1
1,457,739	-		PFLU_RS06520	0.19	-1.4
1,457,871	-		PFLU_RS06520	0.45	+0.5
1,457,997	+		PFLU_RS06520	0.70	-0.1
1,457,997	+		PFLU_RS06520	0.70	-0.8
1,457,997	+		PFLU_RS06520	0.70	-2.2
1,457,997	+		PFLU_RS06520	0.70	+1.4
1,457,997	+		PFLU_RS06520	0.70	+1.8
1,457,997	+		PFLU_RS06520	0.70	+2.2
1,457,998	-		PFLU_RS06520	0.71	-1.9
1,457,998	-		PFLU_RS06520	0.71	+0.4
1,457,998	-		PFLU_RS06520	0.71	-2.0
1,457,998	-		PFLU_RS06520	0.71	-0.1
1,457,998	-		PFLU_RS06520	0.71	+0.4
1,457,998	-		PFLU_RS06520	0.71	-2.0
1,457,998	-		PFLU_RS06520	0.71	-1.1
1,457,998	-		PFLU_RS06520	0.71	+2.8
1,458,119	+				-1.6
1,458,119	+				-0.8
1,458,120	-				-0.5
1,458,120	-				-0.7
1,458,120	-				-1.2
1,458,120	-				+2.8
1,458,131	+				+1.1
1,458,132	-				+1.9
1,458,167	+				-3.3
1,458,175	-				-1.3
1,458,247	+				-1.9
1,458,290	+				+0.9
1,458,290	+				+0.6
1,458,290	+				-2.4
1,458,291	-				-2.4
1,458,291	-				+0.4
1,458,291	-				+2.1
1,458,291	-				-1.0
1,458,356	+				+0.8
1,458,356	+				+1.8
1,458,356	+				+0.0
1,458,357	-				-0.8
1,458,357	-				-1.5
1,458,357	-				-0.4
1,458,380	+				+2.3
1,458,380	+				-1.0
1,458,381	-				+0.6
1,458,381	-				-0.2
1,458,381	-				-0.4
1,458,381	-				-1.6
1,458,482	-		PFLU_RS06525	0.21	-0.6
1,458,526	+		PFLU_RS06525	0.28	+0.5
1,458,526	+		PFLU_RS06525	0.28	+1.6
1,458,527	-		PFLU_RS06525	0.28	+3.7
1,458,527	-		PFLU_RS06525	0.28	+0.5
1,458,527	-		PFLU_RS06525	0.28	-1.4
1,458,585	+		PFLU_RS06525	0.36	+1.1
1,458,585	+		PFLU_RS06525	0.36	+1.9
1,458,585	+		PFLU_RS06525	0.36	+2.2
1,458,586	-		PFLU_RS06525	0.36	+1.7
1,458,586	-		PFLU_RS06525	0.36	+0.8
1,458,617	+		PFLU_RS06525	0.41	-0.8
1,458,617	+		PFLU_RS06525	0.41	-1.2
1,458,617	+		PFLU_RS06525	0.41	+3.5
1,458,617	+		PFLU_RS06525	0.41	+0.4
1,458,617	+		PFLU_RS06525	0.41	-1.0
1,458,617	+		PFLU_RS06525	0.41	+0.4
1,458,617	+		PFLU_RS06525	0.41	-1.0
1,458,617	+		PFLU_RS06525	0.41	+1.6
1,458,617	+		PFLU_RS06525	0.41	-1.3
1,458,617	+		PFLU_RS06525	0.41	+1.8
1,458,617	+		PFLU_RS06525	0.41	-2.6
1,458,617	+		PFLU_RS06525	0.41	-1.1
1,458,617	+		PFLU_RS06525	0.41	-1.2
1,458,617	+		PFLU_RS06525	0.41	+2.0
1,458,617	+		PFLU_RS06525	0.41	+3.3
1,458,617	+		PFLU_RS06525	0.41	-0.6
1,458,617	+		PFLU_RS06525	0.41	-1.0
1,458,617	+		PFLU_RS06525	0.41	-1.3
1,458,617	+		PFLU_RS06525	0.41	-1.5
1,458,618	-		PFLU_RS06525	0.41	+2.9
1,458,618	-		PFLU_RS06525	0.41	+2.7
1,458,618	-		PFLU_RS06525	0.41	-0.3
1,458,618	-		PFLU_RS06525	0.41	-2.5
1,458,618	-		PFLU_RS06525	0.41	-2.2
1,458,618	-		PFLU_RS06525	0.41	-2.1
1,458,618	-		PFLU_RS06525	0.41	+1.1
1,458,618	-		PFLU_RS06525	0.41	-2.6
1,458,618	-		PFLU_RS06525	0.41	-0.8
1,458,618	-		PFLU_RS06525	0.41	-0.1
1,458,618	-		PFLU_RS06525	0.41	+0.7
1,458,618	-		PFLU_RS06525	0.41	-1.6
1,458,748	-		PFLU_RS06525	0.59	-2.1
1,458,847	+		PFLU_RS06525	0.74	+0.8
1,458,847	+		PFLU_RS06525	0.74	+2.8
1,458,847	+		PFLU_RS06525	0.74	+0.6
1,458,847	+		PFLU_RS06525	0.74	+0.0
1,458,847	+		PFLU_RS06525	0.74	+1.1
1,458,847	+		PFLU_RS06525	0.74	-0.1
1,458,847	+		PFLU_RS06525	0.74	-0.1
1,458,847	+		PFLU_RS06525	0.74	+2.0
1,458,847	+		PFLU_RS06525	0.74	+1.6
1,458,847	+		PFLU_RS06525	0.74	+2.9
1,458,847	+		PFLU_RS06525	0.74	+0.7
1,458,847	+		PFLU_RS06525	0.74	+2.8
1,458,848	-		PFLU_RS06525	0.74	-2.1
1,458,848	-		PFLU_RS06525	0.74	-1.5
1,458,848	-		PFLU_RS06525	0.74	-0.4
1,458,848	-		PFLU_RS06525	0.74	+2.4
1,458,848	-		PFLU_RS06525	0.74	-2.3
1,458,848	-		PFLU_RS06525	0.74	+1.8
1,458,848	-		PFLU_RS06525	0.74	-1.3
1,458,848	-		PFLU_RS06525	0.74	-1.1
1,458,848	-		PFLU_RS06525	0.74	+1.6
1,458,848	-		PFLU_RS06525	0.74	+1.2
1,458,848	-		PFLU_RS06525	0.74	-1.7
1,458,848	-		PFLU_RS06525	0.74	-2.1
1,458,848	-		PFLU_RS06525	0.74	+0.5
1,458,848	-		PFLU_RS06525	0.74	+0.8
1,458,848	-		PFLU_RS06525	0.74	-2.0
1,458,848	-		PFLU_RS06525	0.74	+2.6
1,458,848	-		PFLU_RS06525	0.74	+1.0
1,458,893	-		PFLU_RS06525	0.80	+2.1
1,458,893	-		PFLU_RS06525	0.80	+0.4
1,459,083	+				+0.4
1,459,083	+				+0.8
1,459,083	+				-0.6
1,459,083	+				-0.2
1,459,084	-				+1.5
1,459,084	-				+2.4
1,459,084	-				-2.7
1,459,084	-				-0.9
1,459,084	-				+0.6
1,459,084	-				+0.8
1,459,086	+				-0.7
1,459,086	+				+1.7
1,459,087	-				-0.5
1,459,087	-				+0.8
1,459,130	+				+1.4
1,459,131	-				+0.6