Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5058

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
5,831,473	+		Pf6N2E2_5056	0.49	+0.7
5,831,473	+		Pf6N2E2_5056	0.49	-0.9
5,831,473	+		Pf6N2E2_5056	0.49	-0.3
5,831,474	-		Pf6N2E2_5056	0.49	+0.7
5,831,474	-		Pf6N2E2_5056	0.49	+0.7
5,831,521	+		Pf6N2E2_5056	0.53	-0.9
5,831,522	-		Pf6N2E2_5056	0.53	-0.3
5,831,663	+		Pf6N2E2_5056	0.63	-1.9
5,831,664	-		Pf6N2E2_5056	0.63	-0.3
5,831,868	+		Pf6N2E2_5056	0.79	+0.7
5,831,869	-		Pf6N2E2_5056	0.79	+0.7
5,831,936	-		Pf6N2E2_5056	0.84	-1.5
5,832,007	+		Pf6N2E2_5056	0.89	+0.7
5,832,007	+		Pf6N2E2_5056	0.89	+0.7
5,832,007	+		Pf6N2E2_5056	0.89	-1.5
5,832,007	+		Pf6N2E2_5056	0.89	-0.3
5,832,008	-		Pf6N2E2_5056	0.89	-1.1
5,832,008	-		Pf6N2E2_5056	0.89	-0.7
5,832,008	-		Pf6N2E2_5056	0.89	-0.9
5,832,152	+				-0.6
5,832,152	+				+0.7
5,832,152	+				+0.7
5,832,152	+				+0.7
5,832,153	-				-0.3
5,832,178	+				+0.7
5,832,178	+				-0.3
5,832,178	+				-0.3
5,832,178	+				+0.7
5,832,178	+				-1.0
5,832,179	-				-1.8
5,832,321	+		Pf6N2E2_5057	0.61	+4.3
5,832,321	+		Pf6N2E2_5057	0.61	+2.6
5,832,322	-		Pf6N2E2_5057	0.62	+0.7
5,832,325	+		Pf6N2E2_5057	0.64	-0.1
5,832,325	+		Pf6N2E2_5057	0.64	+0.1
5,832,326	-		Pf6N2E2_5057	0.64	-0.9
5,832,329	-		Pf6N2E2_5057	0.66	-0.9
5,832,535	+				-2.1
5,832,535	+				-0.5
5,832,535	+				+0.7
5,832,535	+				+0.7
5,832,538	+				-0.1
5,832,538	+				+0.7
5,832,539	-				+0.7
5,832,814	-		Pf6N2E2_5058	0.21	+0.7
5,832,814	-		Pf6N2E2_5058	0.21	+0.7
5,832,852	+		Pf6N2E2_5058	0.23	+0.7
5,832,852	+		Pf6N2E2_5058	0.23	-1.0
5,832,853	-		Pf6N2E2_5058	0.23	+0.7
5,832,853	-		Pf6N2E2_5058	0.23	+0.7
5,832,853	-		Pf6N2E2_5058	0.23	+0.7
5,832,853	-		Pf6N2E2_5058	0.23	-0.3
5,832,856	+		Pf6N2E2_5058	0.23	+0.7
5,832,856	+		Pf6N2E2_5058	0.23	+0.7
5,832,856	+		Pf6N2E2_5058	0.23	-0.3
5,832,856	+		Pf6N2E2_5058	0.23	+0.7
5,832,857	-		Pf6N2E2_5058	0.23	-1.3
5,832,857	-		Pf6N2E2_5058	0.23	+0.7
5,832,857	-		Pf6N2E2_5058	0.23	+0.7
5,832,857	-		Pf6N2E2_5058	0.23	-0.3
5,833,210	+		Pf6N2E2_5058	0.41	+0.7
5,833,210	+		Pf6N2E2_5058	0.41	-0.3
5,833,211	-		Pf6N2E2_5058	0.41	+0.7
5,833,304	-		Pf6N2E2_5058	0.46	+0.7
5,833,468	+		Pf6N2E2_5058	0.55	-0.9
5,833,469	-		Pf6N2E2_5058	0.55	-2.1
5,833,469	-		Pf6N2E2_5058	0.55	-0.5
5,833,571	-		Pf6N2E2_5058	0.60	-0.3
5,833,598	+		Pf6N2E2_5058	0.62	-1.1
5,833,654	+		Pf6N2E2_5058	0.65	+0.7
5,833,700	+		Pf6N2E2_5058	0.67	+0.7
5,833,701	-		Pf6N2E2_5058	0.67	-0.3
5,833,701	-		Pf6N2E2_5058	0.67	-0.9
5,833,701	-		Pf6N2E2_5058	0.67	-0.5
5,833,796	-		Pf6N2E2_5058	0.72	+0.7
5,833,796	-		Pf6N2E2_5058	0.72	-0.3
5,833,859	+		Pf6N2E2_5058	0.75	+0.7
5,833,859	+		Pf6N2E2_5058	0.75	+0.7
5,833,890	+		Pf6N2E2_5058	0.77	-0.9
5,833,890	+		Pf6N2E2_5058	0.77	+0.7
5,833,891	-		Pf6N2E2_5058	0.77	+1.7
5,833,891	-		Pf6N2E2_5058	0.77	+0.7
5,833,892	-		Pf6N2E2_5058	0.77	+0.7
5,834,066	-		Pf6N2E2_5058	0.86	-0.6
5,834,066	-		Pf6N2E2_5058	0.86	+0.7
5,834,068	+		Pf6N2E2_5058	0.86	-1.1
5,834,140	+				+0.3
5,834,140	+				-0.4
5,834,141	-				-1.3
5,834,141	-				+0.7
5,834,141	-				-0.8
5,834,141	-				-0.3
5,834,141	-				+0.7
5,834,179	+				+0.7
5,834,180	-				-0.3
5,834,180	-				-0.2
5,834,180	-				+0.7
5,834,236	+				-0.6
5,834,335	-				+0.7
5,834,434	+				-0.3
5,834,434	+				+0.7
5,834,435	-				+0.7
5,834,624	+		Pf6N2E2_5059	0.29	+9.5
5,834,624	+		Pf6N2E2_5059	0.29	+0.7
5,834,624	+		Pf6N2E2_5059	0.29	-1.3
5,834,624	+		Pf6N2E2_5059	0.29	+8.9
5,834,624	+		Pf6N2E2_5059	0.29	-0.9
5,834,625	-		Pf6N2E2_5059	0.29	+9.6
5,834,625	-		Pf6N2E2_5059	0.29	-1.3
5,834,625	-		Pf6N2E2_5059	0.29	+0.7
5,834,625	-		Pf6N2E2_5059	0.29	+0.7
5,834,627	+		Pf6N2E2_5059	0.29	+0.7
5,834,627	+		Pf6N2E2_5059	0.29	+7.5
5,834,627	+		Pf6N2E2_5059	0.29	+0.7
5,834,627	+		Pf6N2E2_5059	0.29	+0.7
5,834,628	-		Pf6N2E2_5059	0.29	+9.5
5,834,630	+		Pf6N2E2_5059	0.30	+0.7
5,834,630	+		Pf6N2E2_5059	0.30	+9.5
5,834,630	+		Pf6N2E2_5059	0.30	+9.2
5,834,630	+		Pf6N2E2_5059	0.30	+8.1
5,834,631	-		Pf6N2E2_5059	0.30	-0.3
5,834,631	-		Pf6N2E2_5059	0.30	-0.3
5,834,631	-		Pf6N2E2_5059	0.30	+0.7
5,834,631	-		Pf6N2E2_5059	0.30	+0.7
5,834,654	+		Pf6N2E2_5059	0.33	+9.4
5,834,655	-		Pf6N2E2_5059	0.33	+0.7
5,834,655	-		Pf6N2E2_5059	0.33	+0.7
5,834,655	-		Pf6N2E2_5059	0.33	-0.3
5,834,678	+		Pf6N2E2_5059	0.37	+0.7
5,834,678	+		Pf6N2E2_5059	0.37	+9.5
5,834,834	+		Pf6N2E2_5059	0.60	+9.6
5,834,834	+		Pf6N2E2_5059	0.60	+9.0
5,834,835	-		Pf6N2E2_5059	0.60	-1.9
5,834,835	-		Pf6N2E2_5059	0.60	+9.5
5,834,873	-		Pf6N2E2_5059	0.65	+9.0
5,835,092	+				+7.9
5,835,093	-				+9.3
5,835,096	+				-0.9
5,835,097	-				+0.7
5,835,097	-				+0.7
5,835,097	-				+8.0
5,835,146	-				+0.7
5,835,146	-				+0.4
5,835,146	-				+1.3
5,835,146	-				+0.7