Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4701

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
5,432,577	+		Pf6N2E2_4700	0.32	+0.8
5,432,625	+		Pf6N2E2_4700	0.37	+0.8
5,432,625	+		Pf6N2E2_4700	0.37	-0.8
5,432,658	+		Pf6N2E2_4700	0.40	+0.8
5,432,659	-		Pf6N2E2_4700	0.40	+0.8
5,432,799	+		Pf6N2E2_4700	0.54	-0.2
5,432,800	-		Pf6N2E2_4700	0.54	+0.8
5,432,968	-		Pf6N2E2_4700	0.72	-0.2
5,433,070	-		Pf6N2E2_4700	0.82	+0.8
5,433,270	+				-0.2
5,433,298	+				-1.2
5,433,352	+				-0.2
5,433,407	+		Pf6N2E2_4701	0.15	-1.5
5,433,407	+		Pf6N2E2_4701	0.15	-3.4
5,433,407	+		Pf6N2E2_4701	0.15	-1.2
5,433,408	-		Pf6N2E2_4701	0.15	+0.8
5,433,473	+		Pf6N2E2_4701	0.28	-0.2
5,433,489	-		Pf6N2E2_4701	0.31	+0.8
5,433,489	-		Pf6N2E2_4701	0.31	+0.8
5,433,575	+		Pf6N2E2_4701	0.47	+0.8
5,433,575	+		Pf6N2E2_4701	0.47	-0.2
5,433,575	+		Pf6N2E2_4701	0.47	-0.2
5,433,575	+		Pf6N2E2_4701	0.47	-0.2
5,433,575	+		Pf6N2E2_4701	0.47	-2.4
5,433,575	+		Pf6N2E2_4701	0.47	+0.8
5,433,576	-		Pf6N2E2_4701	0.47	-1.8
5,433,576	-		Pf6N2E2_4701	0.47	-5.2
5,433,576	-		Pf6N2E2_4701	0.47	-2.4
5,433,576	-		Pf6N2E2_4701	0.47	-4.1
5,433,577	+		Pf6N2E2_4701	0.47	+0.8
5,433,577	+		Pf6N2E2_4701	0.47	-0.2
5,433,578	-		Pf6N2E2_4701	0.47	-4.3
5,433,578	-		Pf6N2E2_4701	0.47	+0.8
5,433,578	-		Pf6N2E2_4701	0.47	+0.8
5,433,578	-		Pf6N2E2_4701	0.47	-0.2
5,433,578	-		Pf6N2E2_4701	0.47	-5.0
5,433,578	-		Pf6N2E2_4701	0.47	-0.2
5,433,578	-		Pf6N2E2_4701	0.47	+0.8
5,433,680	+		Pf6N2E2_4701	0.67	+0.8
5,433,680	+		Pf6N2E2_4701	0.67	+0.8
5,433,680	+		Pf6N2E2_4701	0.67	-0.8
5,433,681	-		Pf6N2E2_4701	0.67	-0.2
5,433,681	-		Pf6N2E2_4701	0.67	-0.2
5,433,681	-		Pf6N2E2_4701	0.67	-1.8
5,433,687	-		Pf6N2E2_4701	0.68	+0.8
5,433,687	-		Pf6N2E2_4701	0.68	-0.2
5,433,713	+		Pf6N2E2_4701	0.73	+0.8
5,433,713	+		Pf6N2E2_4701	0.73	-0.8
5,433,713	+		Pf6N2E2_4701	0.73	+0.8
5,433,713	+		Pf6N2E2_4701	0.73	-0.2
5,433,713	+		Pf6N2E2_4701	0.73	-0.2
5,433,714	-		Pf6N2E2_4701	0.73	-2.7
5,433,714	-		Pf6N2E2_4701	0.73	+0.8
5,433,800	+		Pf6N2E2_4701	0.89	-0.2
5,433,800	+		Pf6N2E2_4701	0.89	+0.8
5,433,854	+				+0.8
5,433,854	+				-2.5
5,433,959	+				+0.8
5,433,959	+				+0.8
5,433,959	+				+0.8
5,433,960	-				-2.0
5,434,001	+				-1.8
5,434,001	+				-2.6
5,434,002	-				-0.2
5,434,002	-				-0.2
5,434,325	+		Pf6N2E2_4702	0.22	-1.8
5,434,325	+		Pf6N2E2_4702	0.22	-1.8
5,434,325	+		Pf6N2E2_4702	0.22	-0.2
5,434,326	-		Pf6N2E2_4702	0.22	-0.8
5,434,326	-		Pf6N2E2_4702	0.22	-2.2
5,434,326	-		Pf6N2E2_4702	0.22	-2.5
5,434,326	-		Pf6N2E2_4702	0.22	-0.2
5,434,326	-		Pf6N2E2_4702	0.22	-0.2
5,434,604	+		Pf6N2E2_4702	0.36	-0.8
5,434,604	+		Pf6N2E2_4702	0.36	-2.5
5,434,604	+		Pf6N2E2_4702	0.36	-2.4
5,434,604	+		Pf6N2E2_4702	0.36	+0.8
5,434,605	-		Pf6N2E2_4702	0.36	-3.9
5,434,608	-		Pf6N2E2_4702	0.36	+0.8
5,434,608	-		Pf6N2E2_4702	0.36	+0.8
5,434,608	-		Pf6N2E2_4702	0.36	-1.8
5,434,608	-		Pf6N2E2_4702	0.36	-4.2
5,434,608	-		Pf6N2E2_4702	0.36	+0.8
5,434,608	-		Pf6N2E2_4702	0.36	-0.2
5,434,700	+		Pf6N2E2_4702	0.40	-1.8
5,434,701	-		Pf6N2E2_4702	0.40	-3.3
5,434,820	+		Pf6N2E2_4702	0.46	-1.2
5,434,821	-		Pf6N2E2_4702	0.46	-5.7