Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4689

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
5,422,627	+		Pf6N2E2_4688	0.43	-0.2
5,422,627	+		Pf6N2E2_4688	0.43	+0.2
5,422,677	-		Pf6N2E2_4688	0.47	+0.8
5,422,964	+		Pf6N2E2_4688	0.72	-0.6
5,423,051	+		Pf6N2E2_4688	0.79	+0.2
5,423,051	+		Pf6N2E2_4688	0.79	-1.5
5,423,052	-		Pf6N2E2_4688	0.80	-0.2
5,423,052	-		Pf6N2E2_4688	0.80	-1.2
5,423,052	-		Pf6N2E2_4688	0.80	-0.6
5,423,347	+				+1.8
5,423,348	-				-1.2
5,423,454	+		Pf6N2E2_4689	0.30	+0.8
5,423,454	+		Pf6N2E2_4689	0.30	+0.8
5,423,455	-		Pf6N2E2_4689	0.30	-0.2
5,423,483	+		Pf6N2E2_4689	0.36	+0.8
5,423,513	-		Pf6N2E2_4689	0.43	-2.2
5,423,513	-		Pf6N2E2_4689	0.43	-3.4
5,423,513	-		Pf6N2E2_4689	0.43	+0.8
5,423,593	+		Pf6N2E2_4689	0.59	+0.8
5,423,593	+		Pf6N2E2_4689	0.59	-0.9
5,423,593	+		Pf6N2E2_4689	0.59	-2.2
5,423,689	+		Pf6N2E2_4689	0.79	-0.2
5,423,689	+		Pf6N2E2_4689	0.79	-1.5
5,423,707	+		Pf6N2E2_4689	0.83	+0.8
5,423,707	+		Pf6N2E2_4689	0.83	+0.8
5,423,707	+		Pf6N2E2_4689	0.83	-1.2
5,423,707	+		Pf6N2E2_4689	0.83	-1.4
5,423,734	+		Pf6N2E2_4689	0.89	-1.3
5,423,735	-		Pf6N2E2_4689	0.89	-1.0
5,423,735	-		Pf6N2E2_4689	0.89	-1.2
5,423,735	-		Pf6N2E2_4689	0.89	-0.2
5,423,767	+				+0.8
5,423,767	+				+0.8
5,423,767	+				-0.2
5,423,768	-				+0.8
5,423,768	-				+0.8
5,423,768	-				-2.4
5,423,804	-				+0.8
5,423,804	-				-0.8
5,423,804	-				+0.0
5,423,815	+				-1.2
5,423,816	-				-0.6
5,423,866	-				+0.3
5,423,878	+				-2.0
5,423,878	+				-0.5
5,423,878	+				-1.4
5,423,892	+				-3.3
5,423,893	-				+0.8
5,423,893	-				+0.8
5,423,893	-				-1.2
5,423,893	-				+0.8
5,424,066	-		Pf6N2E2_4690	0.11	-0.2
5,424,066	-		Pf6N2E2_4690	0.11	-1.3
5,424,066	-		Pf6N2E2_4690	0.11	-2.0
5,424,142	+		Pf6N2E2_4690	0.18	-2.4
5,424,142	+		Pf6N2E2_4690	0.18	-0.2
5,424,142	+		Pf6N2E2_4690	0.18	+0.8
5,424,143	-		Pf6N2E2_4690	0.19	-0.2
5,424,143	-		Pf6N2E2_4690	0.19	-2.4
5,424,220	+		Pf6N2E2_4690	0.27	-0.8
5,424,220	+		Pf6N2E2_4690	0.27	-2.2
5,424,220	+		Pf6N2E2_4690	0.27	-0.8
5,424,221	-		Pf6N2E2_4690	0.27	+0.8
5,424,221	-		Pf6N2E2_4690	0.27	-0.2
5,424,221	-		Pf6N2E2_4690	0.27	+0.8
5,424,415	+		Pf6N2E2_4690	0.47	-0.2
5,424,416	-		Pf6N2E2_4690	0.47	+0.1
5,424,416	-		Pf6N2E2_4690	0.47	-0.2
5,424,416	-		Pf6N2E2_4690	0.47	-0.2
5,424,490	+		Pf6N2E2_4690	0.54	-0.2
5,424,491	-		Pf6N2E2_4690	0.55	-1.2
5,424,547	+		Pf6N2E2_4690	0.60	+0.8
5,424,548	-		Pf6N2E2_4690	0.60	-0.2
5,424,575	+		Pf6N2E2_4690	0.63	+0.8
5,424,575	+		Pf6N2E2_4690	0.63	-1.3