Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4461

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
5,191,822	+		Pf6N2E2_4459	0.76	-2.4
5,191,936	+				-0.4
5,191,936	+				+0.8
5,191,936	+				+0.2
5,191,936	+				-0.6
5,191,936	+				+0.8
5,191,936	+				-0.8
5,191,936	+				-0.8
5,191,936	+				+0.8
5,191,936	+				+0.8
5,191,936	+				+0.8
5,191,936	+				+1.3
5,191,936	+				+0.8
5,191,936	+				-1.6
5,191,936	+				-1.2
5,191,936	+				-0.2
5,191,936	+				+0.3
5,191,936	+				-0.2
5,191,936	+				-0.8
5,191,936	+				-0.2
5,191,936	+				+0.8
5,191,936	+				+0.8
5,191,936	+				-0.2
5,191,936	+				+0.8
5,191,937	-				-1.0
5,191,937	-				-0.9
5,191,937	-				-0.8
5,191,937	-				-0.9
5,191,937	-				-0.2
5,191,937	-				+0.8
5,191,937	-				-0.2
5,191,937	-				+0.8
5,191,937	-				-1.4
5,191,937	-				-1.0
5,191,937	-				-0.2
5,191,937	-				-0.8
5,191,937	-				-0.2
5,191,937	-				-1.9
5,191,937	-				-0.6
5,191,937	-				-2.2
5,191,937	-				-0.2
5,191,940	+				-0.6
5,191,940	+				+0.8
5,191,999	+				+0.8
5,191,999	+				-1.8
5,191,999	+				-1.6
5,192,000	-				-0.2
5,192,000	-				-2.1
5,192,000	-				+0.8
5,192,000	-				+0.8
5,192,000	-				-2.4
5,192,009	+				-0.2
5,192,009	+				+0.8
5,192,009	+				+0.8
5,192,009	+				-0.2
5,192,009	+				-0.2
5,192,009	+				+0.8
5,192,010	-				+0.8
5,192,023	+				+0.8
5,192,440	+				-0.2
5,192,440	+				-0.2
5,192,440	+				-1.2
5,192,440	+				+0.8
5,192,440	+				-1.2
5,192,440	+				-1.2
5,192,440	+				-0.2
5,192,440	+				+0.8
5,192,441	-				-0.2
5,192,441	-				-2.8
5,192,441	-				-0.2
5,192,441	-				+0.8
5,192,441	-				-0.2
5,192,524	+				+0.8
5,192,591	+				-0.8
5,192,591	+				-0.2
5,192,591	+				-0.2
5,192,591	+				-0.2
5,192,591	+				+0.8
5,192,595	+				+0.8
5,192,595	+				-0.2
5,192,595	+				-0.4
5,192,646	+				+0.8
5,192,662	+				+1.2
5,192,670	+				-1.2
5,193,941	+				-0.8
5,193,941	+				-1.1
5,193,942	-				+0.8
5,194,006	+				+0.8
5,194,007	-				-0.2
5,194,036	-				-0.1
5,194,060	+				+0.8
5,194,061	-				-0.2
5,194,078	+				+0.8
5,194,424	-		Pf6N2E2_4462	0.18	-0.2
5,194,424	-		Pf6N2E2_4462	0.18	-0.2
5,194,514	+		Pf6N2E2_4462	0.22	+0.8
5,194,514	+		Pf6N2E2_4462	0.22	+0.8
5,194,514	+		Pf6N2E2_4462	0.22	+0.8
5,194,514	+		Pf6N2E2_4462	0.22	+0.8
5,194,515	-		Pf6N2E2_4462	0.22	-1.1
5,194,515	-		Pf6N2E2_4462	0.22	+0.8
5,194,515	-		Pf6N2E2_4462	0.22	-1.6
5,194,517	+		Pf6N2E2_4462	0.22	+0.8
5,194,517	+		Pf6N2E2_4462	0.22	+0.8
5,194,517	+		Pf6N2E2_4462	0.22	-0.2
5,194,517	+		Pf6N2E2_4462	0.22	+0.2
5,194,517	+		Pf6N2E2_4462	0.22	-0.2
5,194,517	+		Pf6N2E2_4462	0.22	-0.8
5,194,517	+		Pf6N2E2_4462	0.22	+0.8
5,194,517	+		Pf6N2E2_4462	0.22	-1.2
5,194,517	+		Pf6N2E2_4462	0.22	-0.4
5,194,517	+		Pf6N2E2_4462	0.22	-0.4
5,194,517	+		Pf6N2E2_4462	0.22	+0.8
5,194,517	+		Pf6N2E2_4462	0.22	+0.8
5,194,517	+		Pf6N2E2_4462	0.22	-0.4
5,194,517	+		Pf6N2E2_4462	0.22	-1.6
5,194,517	+		Pf6N2E2_4462	0.22	-0.2
5,194,517	+		Pf6N2E2_4462	0.22	-0.2
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.2
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.2
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.8
5,194,518	-		Pf6N2E2_4462	0.22	-0.2
5,194,518	-		Pf6N2E2_4462	0.22	+0.8
5,194,684	-		Pf6N2E2_4462	0.31	+0.9