Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3773

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
4,395,951	+		Pf6N2E2_3772	0.48	-0.8
4,395,951	+		Pf6N2E2_3772	0.48	-1.8
4,395,951	+		Pf6N2E2_3772	0.48	+0.8
4,395,951	+		Pf6N2E2_3772	0.48	-0.2
4,395,952	-		Pf6N2E2_3772	0.48	+0.8
4,395,952	-		Pf6N2E2_3772	0.48	+0.8
4,395,952	-		Pf6N2E2_3772	0.48	-0.2
4,396,068	+		Pf6N2E2_3772	0.55	-0.2
4,396,198	-		Pf6N2E2_3772	0.63	-0.2
4,396,211	-		Pf6N2E2_3772	0.64	+0.8
4,396,211	-		Pf6N2E2_3772	0.64	-0.2
4,396,275	+		Pf6N2E2_3772	0.67	+0.8
4,396,290	+		Pf6N2E2_3772	0.68	-0.2
4,396,290	+		Pf6N2E2_3772	0.68	-0.8
4,396,291	-		Pf6N2E2_3772	0.68	+0.8
4,396,291	-		Pf6N2E2_3772	0.68	-0.2
4,396,291	-		Pf6N2E2_3772	0.68	+0.8
4,396,291	-		Pf6N2E2_3772	0.68	-0.8
4,396,521	+		Pf6N2E2_3772	0.82	+0.8
4,396,522	-		Pf6N2E2_3772	0.82	+0.8
4,396,522	-		Pf6N2E2_3772	0.82	+0.8
4,396,522	-		Pf6N2E2_3772	0.82	-1.2
4,396,561	+		Pf6N2E2_3772	0.84	+0.8
4,396,561	+		Pf6N2E2_3772	0.84	-0.2
4,396,562	-		Pf6N2E2_3772	0.84	-0.5
4,396,562	-		Pf6N2E2_3772	0.84	+0.8
4,396,624	-		Pf6N2E2_3772	0.88	+0.8
4,396,806	+				+0.8
4,396,806	+				-0.7
4,396,806	+				-0.4
4,396,806	+				-0.4
4,396,806	+				-0.2
4,396,806	+				-0.8
4,396,807	-				+0.8
4,396,807	-				-1.1
4,396,807	-				+1.8
4,396,807	-				-0.6
4,396,807	-				-1.2
4,396,807	-				+0.8
4,396,807	-				-1.6
4,396,807	-				+0.6
4,396,807	-				-0.7
4,396,807	-				-0.8
4,396,821	+				+0.8
4,396,822	-				+0.8
4,396,822	-				+0.8
4,396,843	+				-0.2
4,396,920	+				-1.0
4,396,920	+				-0.2
4,396,920	+				-1.5
4,396,920	+				+0.8
4,396,920	+				-0.8
4,396,920	+				+0.8
4,396,921	-				+0.8
4,396,921	-				+0.8
4,396,921	-				-0.8
4,396,921	-				-0.8
4,396,921	-				+0.8
4,396,921	-				+0.8
4,396,921	-				+0.8
4,396,970	-				-0.2
4,397,185	-		Pf6N2E2_3773	0.32	+0.8
4,397,355	+		Pf6N2E2_3773	0.52	-0.6
4,397,356	-		Pf6N2E2_3773	0.52	-0.2
4,397,377	+		Pf6N2E2_3773	0.55	+0.0
4,397,377	+		Pf6N2E2_3773	0.55	-0.2
4,397,377	+		Pf6N2E2_3773	0.55	-0.2
4,397,378	-		Pf6N2E2_3773	0.55	-0.5
4,397,378	-		Pf6N2E2_3773	0.55	+0.8
4,397,378	-		Pf6N2E2_3773	0.55	+0.2
4,397,378	-		Pf6N2E2_3773	0.55	-0.2
4,397,381	+		Pf6N2E2_3773	0.55	+1.1
4,397,381	+		Pf6N2E2_3773	0.55	+0.8
4,397,381	+		Pf6N2E2_3773	0.55	-1.0
4,397,397	+		Pf6N2E2_3773	0.57	-1.2
4,397,397	+		Pf6N2E2_3773	0.57	-0.4
4,397,398	-		Pf6N2E2_3773	0.57	+1.7
4,397,479	-		Pf6N2E2_3773	0.67	+0.8
4,397,820	+				-2.4
4,397,820	+				-0.9
4,397,820	+				+0.8
4,397,820	+				-0.3
4,397,821	-				-0.2
4,397,821	-				-0.8
4,397,821	-				-0.2
4,397,821	-				-0.2
4,397,994	-				-1.2
4,398,143	-		Pf6N2E2_3774	0.16	+0.8
4,398,163	+		Pf6N2E2_3774	0.17	-1.2
4,398,164	-		Pf6N2E2_3774	0.17	-0.8
4,398,515	-		Pf6N2E2_3774	0.38	-0.8
4,398,560	-		Pf6N2E2_3774	0.41	+0.8
4,398,560	-		Pf6N2E2_3774	0.41	-0.2
4,398,562	-		Pf6N2E2_3774	0.41	-0.9
4,398,653	+		Pf6N2E2_3774	0.46	-0.2
4,398,653	+		Pf6N2E2_3774	0.46	-0.8
4,398,654	-		Pf6N2E2_3774	0.46	-1.5
4,398,682	+		Pf6N2E2_3774	0.48	-0.1
4,398,682	+		Pf6N2E2_3774	0.48	+0.8
4,398,683	-		Pf6N2E2_3774	0.48	-0.8
4,398,683	-		Pf6N2E2_3774	0.48	+0.8
4,398,683	-		Pf6N2E2_3774	0.48	+0.8
4,398,683	-		Pf6N2E2_3774	0.48	-1.2
4,398,683	-		Pf6N2E2_3774	0.48	+0.8