Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3020

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
3,505,291	+		Pf6N2E2_3018	0.46	+0.7
3,505,291	+		Pf6N2E2_3018	0.46	-0.3
3,505,292	-		Pf6N2E2_3018	0.46	-2.5
3,505,292	-		Pf6N2E2_3018	0.46	-0.3
3,505,361	+		Pf6N2E2_3018	0.58	-1.3
3,505,361	+		Pf6N2E2_3018	0.58	-0.5
3,505,361	+		Pf6N2E2_3018	0.58	-0.5
3,505,362	-		Pf6N2E2_3018	0.59	+0.3
3,505,362	-		Pf6N2E2_3018	0.59	+0.7
3,505,380	-		Pf6N2E2_3018	0.62	+0.7
3,505,502	+		Pf6N2E2_3018	0.83	-1.5
3,505,613	+				-0.9
3,505,614	-				-0.2
3,505,614	-				-0.3
3,505,864	+		Pf6N2E2_3019	0.23	-1.9
3,505,864	+		Pf6N2E2_3019	0.23	-0.4
3,505,865	-		Pf6N2E2_3019	0.23	+0.6
3,505,865	-		Pf6N2E2_3019	0.23	-0.6
3,505,865	-		Pf6N2E2_3019	0.23	-0.6
3,505,961	-		Pf6N2E2_3019	0.42	+0.6
3,505,964	+		Pf6N2E2_3019	0.42	-0.4
3,505,965	-		Pf6N2E2_3019	0.43	-0.4
3,505,965	-		Pf6N2E2_3019	0.43	-0.8
3,506,249	+				-0.8
3,506,250	-				+0.6
3,506,256	+				+0.6
3,506,257	-				-0.5
3,506,257	-				+0.6
3,506,310	+				-0.4
3,506,310	+				-0.5
3,506,310	+				+0.6
3,506,310	+				+0.6
3,506,311	-				-0.4
3,506,358	+				-1.7
3,506,358	+				-0.4
3,506,358	+				-1.2
3,506,358	+				-1.1
3,506,359	-				-0.4
3,506,359	-				-1.9
3,506,409	+		Pf6N2E2_3020	0.13	+0.6
3,506,571	+		Pf6N2E2_3020	0.27	-1.2
3,506,571	+		Pf6N2E2_3020	0.27	-0.9
3,506,643	+		Pf6N2E2_3020	0.33	+0.6
3,506,643	+		Pf6N2E2_3020	0.33	+0.6
3,506,700	+		Pf6N2E2_3020	0.38	+0.4
3,506,701	-		Pf6N2E2_3020	0.38	+0.6
3,506,701	-		Pf6N2E2_3020	0.38	+0.6
3,506,701	-		Pf6N2E2_3020	0.38	+0.1
3,506,731	-		Pf6N2E2_3020	0.41	+0.6
3,506,731	-		Pf6N2E2_3020	0.41	-0.4
3,506,835	+		Pf6N2E2_3020	0.50	+0.3
3,506,835	+		Pf6N2E2_3020	0.50	-0.4
3,506,836	-		Pf6N2E2_3020	0.50	-0.4
3,506,836	-		Pf6N2E2_3020	0.50	+0.6
3,506,907	+		Pf6N2E2_3020	0.56	+0.6
3,506,907	+		Pf6N2E2_3020	0.56	-0.5
3,506,907	+		Pf6N2E2_3020	0.56	+0.6
3,506,908	-		Pf6N2E2_3020	0.56	-0.9
3,506,908	-		Pf6N2E2_3020	0.56	+0.6
3,506,908	-		Pf6N2E2_3020	0.56	+0.6
3,506,908	-		Pf6N2E2_3020	0.56	-1.4
3,506,908	-		Pf6N2E2_3020	0.56	+0.1
3,506,908	-		Pf6N2E2_3020	0.56	+0.6
3,506,908	-		Pf6N2E2_3020	0.56	-0.4
3,507,162	+		Pf6N2E2_3020	0.78	-0.0
3,507,425	+				-1.9
3,507,607	+		Pf6N2E2_3021	0.87	+0.6
3,507,614	+				-1.4
3,507,614	+				-0.1
3,507,614	+				-1.9
3,507,614	+				+0.6
3,507,615	-				-0.4
3,507,726	-				-0.4
3,508,046	-		Pf6N2E2_3022	0.81	-0.8
3,508,109	-				+0.6
3,508,109	-				-0.4
3,508,122	+				+0.6
3,508,123	-				-0.9
3,508,140	+				+0.2
3,508,140	+				-0.4
3,508,140	+				+0.6
3,508,141	-				-0.9
3,508,141	-				-0.5
3,508,143	+				+0.6