Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1996

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
2,361,403	+				+0.5
2,361,404	-				+0.5
2,361,410	+				+0.5
2,361,410	+				+0.5
2,361,410	+				+0.5
2,361,414	+				+0.5
2,361,415	-				-1.1
2,361,519	+				-0.6
2,361,596	+				+0.5
2,361,599	+				+0.5
2,361,600	-				-0.5
2,361,692	+				-0.4
2,361,692	+				-1.1
2,361,696	+				+0.5
2,361,696	+				+0.5
2,361,730	+				+0.5
2,361,788	+				-0.1
2,361,789	-				+0.5
2,362,006	+				+0.5
2,362,006	+				+0.5
2,362,007	-				+0.5
2,362,026	+				+0.5
2,362,175	+				+1.0
2,362,175	+				-1.4
2,362,309	+				+0.5
2,362,309	+				-0.5
2,362,309	+				-1.1
2,362,310	-				+0.5
2,362,310	-				+0.5
2,362,310	-				-1.2
2,362,432	-		Pf6N2E2_1996	0.11	-0.5
2,362,482	+		Pf6N2E2_1996	0.21	-0.5
2,362,482	+		Pf6N2E2_1996	0.21	-1.1
2,362,482	+		Pf6N2E2_1996	0.21	-0.4
2,362,482	+		Pf6N2E2_1996	0.21	+0.5
2,362,482	+		Pf6N2E2_1996	0.21	-0.5
2,362,482	+		Pf6N2E2_1996	0.21	-0.1
2,362,483	-		Pf6N2E2_1996	0.21	-1.9
2,362,483	-		Pf6N2E2_1996	0.21	+0.5
2,362,483	-		Pf6N2E2_1996	0.21	+0.5
2,362,501	+		Pf6N2E2_1996	0.25	-2.2
2,362,535	+		Pf6N2E2_1996	0.32	+0.5
2,362,536	-		Pf6N2E2_1996	0.32	-0.5
2,362,612	+		Pf6N2E2_1996	0.47	-1.1
2,362,689	+		Pf6N2E2_1996	0.63	-0.8
2,362,717	-		Pf6N2E2_1996	0.68	+0.5
2,362,945	-				+0.5
2,362,952	-				+0.5
2,362,952	-				+0.5
2,363,046	+				+0.5
2,363,191	-				+0.5
2,363,250	+				-0.5
2,363,251	-				+0.5
2,363,251	-				-0.6
2,363,278	-				+0.5
2,363,414	-		Pf6N2E2_1997	0.14	+1.5
2,363,466	+		Pf6N2E2_1997	0.22	+0.5
2,363,466	+		Pf6N2E2_1997	0.22	+0.5
2,363,539	-		Pf6N2E2_1997	0.33	+0.5
2,363,539	-		Pf6N2E2_1997	0.33	+0.5
2,363,865	-		Pf6N2E2_1997	0.81	-1.5