Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5365

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
6,162,249	-		Pf6N2E2_5364	0.50	-0.8
6,162,267	+		Pf6N2E2_5364	0.51	-0.9
6,162,267	+		Pf6N2E2_5364	0.51	-0.6
6,162,267	+		Pf6N2E2_5364	0.51	-1.1
6,162,409	+		Pf6N2E2_5364	0.61	-0.6
6,162,409	+		Pf6N2E2_5364	0.61	-1.1
6,162,410	-		Pf6N2E2_5364	0.61	+0.4
6,162,410	-		Pf6N2E2_5364	0.61	-1.0
6,162,410	-		Pf6N2E2_5364	0.61	-1.1
6,162,473	-		Pf6N2E2_5364	0.65	-2.1
6,162,586	+		Pf6N2E2_5364	0.73	-1.6
6,162,586	+		Pf6N2E2_5364	0.73	-0.3
6,162,586	+		Pf6N2E2_5364	0.73	+1.0
6,162,586	+		Pf6N2E2_5364	0.73	-0.6
6,162,587	-		Pf6N2E2_5364	0.73	-0.6
6,162,587	-		Pf6N2E2_5364	0.73	-1.1
6,162,587	-		Pf6N2E2_5364	0.73	+0.4
6,162,627	+		Pf6N2E2_5364	0.75	-0.6
6,162,627	+		Pf6N2E2_5364	0.75	+0.4
6,162,628	-		Pf6N2E2_5364	0.75	-0.4
6,162,628	-		Pf6N2E2_5364	0.75	+0.0
6,162,667	+		Pf6N2E2_5364	0.78	-1.2
6,162,667	+		Pf6N2E2_5364	0.78	+0.4
6,162,778	+		Pf6N2E2_5364	0.85	-0.6
6,162,778	+		Pf6N2E2_5364	0.85	-0.6
6,162,936	+				-0.6
6,163,127	-				-2.3
6,163,127	-				+0.4
6,163,506	-		Pf6N2E2_5365	0.20	+0.4
6,163,776	+		Pf6N2E2_5365	0.40	+1.7
6,163,776	+		Pf6N2E2_5365	0.40	+0.4
6,163,776	+		Pf6N2E2_5365	0.40	-0.6
6,163,776	+		Pf6N2E2_5365	0.40	+1.0
6,163,776	+		Pf6N2E2_5365	0.40	-0.6
6,163,776	+		Pf6N2E2_5365	0.40	+1.9
6,163,777	-		Pf6N2E2_5365	0.40	+1.8
6,163,777	-		Pf6N2E2_5365	0.40	-0.6
6,163,890	+		Pf6N2E2_5365	0.49	-0.6
6,163,890	+		Pf6N2E2_5365	0.49	+0.4
6,163,890	+		Pf6N2E2_5365	0.49	+2.2
6,164,213	+		Pf6N2E2_5365	0.72	-0.6
6,164,446	-		Pf6N2E2_5365	0.89	-0.6
6,164,446	-		Pf6N2E2_5365	0.89	-0.6
6,164,502	+				+0.3
6,164,503	-				-0.6
6,164,503	-				+0.4
6,164,505	-				+0.4
6,164,505	-				-0.6
6,164,505	-				+1.0
6,164,505	-				+0.9
6,164,614	+				-0.6
6,164,615	-				-1.0
6,164,615	-				+0.4
6,164,615	-				-3.5
6,164,974	+		Pf6N2E2_5366	0.58	-0.6
6,164,974	+		Pf6N2E2_5366	0.58	+0.4
6,164,975	-		Pf6N2E2_5366	0.58	+0.4
6,164,975	-		Pf6N2E2_5366	0.58	-1.6
6,164,975	-		Pf6N2E2_5366	0.58	-0.6
6,164,975	-		Pf6N2E2_5366	0.58	-1.1
6,165,078	+		Pf6N2E2_5366	0.73	+1.0
6,165,079	-		Pf6N2E2_5366	0.73	+1.4
6,165,131	-		Pf6N2E2_5366	0.81	-0.6
6,165,189	-		Pf6N2E2_5366	0.89	+0.4
6,165,190	+		Pf6N2E2_5366	0.89	+0.4
6,165,190	+		Pf6N2E2_5366	0.89	+0.4
6,165,190	+		Pf6N2E2_5366	0.89	-0.6
6,165,220	+				-1.1
6,165,221	-				-0.9
6,165,221	-				+0.4
6,165,358	+				-0.8
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				-0.6
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				-0.6
6,165,358	+				-1.1
6,165,358	+				+0.4
6,165,358	+				+0.4
6,165,358	+				-1.6
6,165,358	+				+0.4
6,165,358	+				-2.9
6,165,358	+				-0.4
6,165,359	-				+0.9
6,165,359	-				+0.4
6,165,359	-				-2.7
6,165,359	-				-0.6
6,165,359	-				-0.7
6,165,359	-				+0.4
6,165,359	-				+0.4
6,165,359	-				+0.4
6,165,359	-				+0.4
6,165,359	-				-1.0
6,165,359	-				+0.4
6,165,359	-				+0.4
6,165,359	-				-0.6
6,165,359	-				-0.6
6,165,359	-				+0.4
6,165,359	-				-0.1
6,165,359	-				+0.4
6,165,359	-				+0.4
6,165,360	+				-1.1
6,165,360	+				-0.6
6,165,360	+				+0.4
6,165,361	-				-1.1
6,165,361	-				+0.4