Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5331

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
6,126,027	-				+0.4
6,126,063	+				+0.4
6,126,063	+				-1.1
6,126,074	+				+0.4
6,126,075	-				+0.4
6,126,075	-				-0.6
6,126,161	-				+0.4
6,126,161	-				+0.4
6,126,251	-		Pf6N2E2_5331	0.17	-0.6
6,126,283	+		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	-0.6
6,126,571	+		Pf6N2E2_5331	0.46	+0.4
6,126,572	-		Pf6N2E2_5331	0.46	+1.4
6,126,572	-		Pf6N2E2_5331	0.46	-0.1
6,126,572	-		Pf6N2E2_5331	0.46	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	-0.6
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,792	-		Pf6N2E2_5331	0.66	+0.0
6,126,792	-		Pf6N2E2_5331	0.66	+0.4
6,126,792	-		Pf6N2E2_5331	0.66	+2.4
6,126,792	-		Pf6N2E2_5331	0.66	-0.6
6,126,828	+		Pf6N2E2_5331	0.70	+0.4
6,126,828	+		Pf6N2E2_5331	0.70	+2.0
6,127,006	+		Pf6N2E2_5331	0.86	-0.1
6,127,006	+		Pf6N2E2_5331	0.86	+0.4
6,127,006	+		Pf6N2E2_5331	0.86	+0.4
6,127,060	+				+0.1
6,127,149	+				+0.0
6,127,149	+				+0.4
6,127,209	-				-0.6
6,127,209	-				-0.6
6,127,321	+				-0.7
6,127,321	+				-1.1
6,127,321	+				-1.1
6,127,321	+				-1.1
6,127,321	+				-0.6
6,127,321	+				-1.2
6,127,322	-				+0.4
6,127,322	-				+0.4
6,127,322	-				-2.1
6,127,322	-				-0.9
6,127,322	-				+0.4
6,127,322	-				-0.5
6,127,322	-				-1.1
6,127,374	+		Pf6N2E2_5332	0.10	+0.4
6,127,374	+		Pf6N2E2_5332	0.10	+0.4
6,127,374	+		Pf6N2E2_5332	0.10	+0.4
6,127,375	-		Pf6N2E2_5332	0.11	-0.4
6,127,449	+		Pf6N2E2_5332	0.18	-0.6
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,450	-		Pf6N2E2_5332	0.18	-0.8
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,547	-		Pf6N2E2_5332	0.28	+0.4
6,127,641	+		Pf6N2E2_5332	0.37	+0.4
6,127,641	+		Pf6N2E2_5332	0.37	-0.6
6,127,642	-		Pf6N2E2_5332	0.37	-0.9
6,127,642	-		Pf6N2E2_5332	0.37	-0.8
6,127,659	+		Pf6N2E2_5332	0.39	+0.4
6,127,659	+		Pf6N2E2_5332	0.39	+0.4
6,127,659	+		Pf6N2E2_5332	0.39	-2.9
6,127,660	-		Pf6N2E2_5332	0.39	-0.6
6,127,660	-		Pf6N2E2_5332	0.39	+0.4
6,127,660	-		Pf6N2E2_5332	0.39	-0.1
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	-0.6
6,127,719	+		Pf6N2E2_5332	0.45	-0.6
6,127,720	-		Pf6N2E2_5332	0.45	-1.1
6,127,720	-		Pf6N2E2_5332	0.45	+0.4
6,127,720	-		Pf6N2E2_5332	0.45	-1.1
6,127,720	-		Pf6N2E2_5332	0.45	-0.9
6,127,725	+		Pf6N2E2_5332	0.46	-0.6
6,127,726	-		Pf6N2E2_5332	0.46	+0.4
6,127,726	-		Pf6N2E2_5332	0.46	+0.4
6,127,805	+		Pf6N2E2_5332	0.54	-0.6
6,127,805	+		Pf6N2E2_5332	0.54	-0.6
6,127,806	-		Pf6N2E2_5332	0.54	+0.4
6,127,848	+		Pf6N2E2_5332	0.58	-2.1
6,127,849	-		Pf6N2E2_5332	0.58	+0.4
6,128,032	+		Pf6N2E2_5332	0.77	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	-1.1
6,128,060	+		Pf6N2E2_5332	0.80	-0.6
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	-0.9
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	-0.6
6,128,061	-		Pf6N2E2_5332	0.80	-1.6
6,128,061	-		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	-0.6
6,128,061	-		Pf6N2E2_5332	0.80	+0.4