Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5330

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
6,123,654	+		Pf6N2E2_5328	0.65	+0.4
6,123,654	+		Pf6N2E2_5328	0.65	-2.6
6,123,654	+		Pf6N2E2_5328	0.65	+0.4
6,123,788	+				+0.4
6,123,788	+				+0.4
6,123,788	+				+0.4
6,123,789	-				+0.4
6,123,789	-				-1.1
6,123,818	+				+0.4
6,123,819	-				+0.4
6,123,820	+				+0.4
6,123,835	+				-3.3
6,123,835	+				-0.6
6,123,836	-				-0.6
6,123,836	-				+0.4
6,123,836	-				+2.0
6,123,861	+				-3.1
6,123,861	+				+0.4
6,123,861	+				-0.6
6,123,861	+				-2.1
6,123,861	+				-2.6
6,123,861	+				-1.1
6,123,861	+				+0.4
6,123,862	-				-1.4
6,123,862	-				-1.1
6,123,862	-				+0.4
6,123,862	-				+0.4
6,123,864	-				-0.6
6,123,902	+				-1.1
6,123,903	-				-0.7
6,123,903	-				+0.4
6,123,903	-				+0.4
6,123,906	+				-1.1
6,123,906	+				-1.1
6,123,907	-				+0.4
6,123,907	-				+2.0
6,123,922	-				-0.6
6,123,922	-				-1.1
6,123,922	-				-0.6
6,123,952	+				-1.1
6,123,952	+				-1.1
6,123,953	-				-1.1
6,123,953	-				-0.6
6,123,953	-				-1.1
6,123,953	-				+0.4
6,123,953	-				-1.7
6,123,969	+				+0.4
6,123,970	-				-1.1
6,123,970	-				-0.6
6,124,007	+				-2.1
6,124,007	+				-1.6
6,124,007	+				-0.3
6,124,008	-				-0.6
6,124,008	-				-0.6
6,124,133	-		Pf6N2E2_5329	0.29	-1.3
6,124,148	+		Pf6N2E2_5329	0.32	+0.4
6,124,149	-		Pf6N2E2_5329	0.32	-0.6
6,124,149	-		Pf6N2E2_5329	0.32	-1.6
6,124,158	+		Pf6N2E2_5329	0.33	+0.4
6,124,158	+		Pf6N2E2_5329	0.33	+0.4
6,124,159	-		Pf6N2E2_5329	0.33	-0.7
6,124,460	+		Pf6N2E2_5329	0.81	-1.1
6,124,461	-		Pf6N2E2_5329	0.81	+0.1
6,124,461	-		Pf6N2E2_5329	0.81	+1.3
6,126,027	-				+0.4
6,126,063	+				+0.4
6,126,063	+				-1.1
6,126,074	+				+0.4
6,126,075	-				+0.4
6,126,075	-				-0.6
6,126,161	-				+0.4
6,126,161	-				+0.4
6,126,251	-		Pf6N2E2_5331	0.17	-0.6
6,126,283	+		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	+0.4
6,126,284	-		Pf6N2E2_5331	0.20	-0.6
6,126,571	+		Pf6N2E2_5331	0.46	+0.4
6,126,572	-		Pf6N2E2_5331	0.46	+1.4
6,126,572	-		Pf6N2E2_5331	0.46	-0.1
6,126,572	-		Pf6N2E2_5331	0.46	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	-0.6
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,791	+		Pf6N2E2_5331	0.66	+0.4
6,126,792	-		Pf6N2E2_5331	0.66	+0.0
6,126,792	-		Pf6N2E2_5331	0.66	+0.4
6,126,792	-		Pf6N2E2_5331	0.66	+2.4
6,126,792	-		Pf6N2E2_5331	0.66	-0.6
6,126,828	+		Pf6N2E2_5331	0.70	+0.4
6,126,828	+		Pf6N2E2_5331	0.70	+2.0