Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5211

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
6,009,350	-		Pf6N2E2_5209	0.32	-1.1
6,009,386	+		Pf6N2E2_5209	0.37	+0.4
6,009,417	+		Pf6N2E2_5209	0.41	-0.8
6,009,417	+		Pf6N2E2_5209	0.41	+0.4
6,009,418	-		Pf6N2E2_5209	0.41	-0.6
6,009,437	+		Pf6N2E2_5209	0.44	-0.6
6,009,567	+		Pf6N2E2_5209	0.60	-0.6
6,009,644	+		Pf6N2E2_5209	0.70	+0.1
6,009,645	-		Pf6N2E2_5209	0.71	+0.4
6,009,681	+		Pf6N2E2_5209	0.75	-0.8
6,009,681	+		Pf6N2E2_5209	0.75	+0.4
6,009,832	+				-0.6
6,009,832	+				-0.5
6,009,833	-				+0.4
6,009,833	-				-1.6
6,009,833	-				-0.3
6,009,866	+				-2.7
6,009,866	+				+0.4
6,009,867	-				+0.4
6,009,870	+				-0.6
6,009,870	+				+0.2
6,009,870	+				+0.4
6,009,870	+				+0.4
6,009,870	+				+0.4
6,009,871	-				+0.4
6,009,871	-				+0.4
6,009,871	-				+0.4
6,009,871	-				-2.7
6,009,871	-				+0.4
6,009,907	+				-1.6
6,009,908	-				-0.6
6,010,071	+		Pf6N2E2_5210	0.54	-0.6
6,010,071	+		Pf6N2E2_5210	0.54	-0.6
6,010,072	-		Pf6N2E2_5210	0.54	-0.6
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,177	+		Pf6N2E2_5210	0.86	+0.4
6,010,225	+				+0.4
6,010,225	+				-0.6
6,010,225	+				-0.6
6,010,225	+				-0.8
6,010,225	+				+0.4
6,010,225	+				-0.6
6,010,225	+				+0.4
6,010,226	-				-0.6
6,010,227	+				-0.6
6,010,227	+				-0.6
6,010,228	-				+0.4
6,010,228	-				+0.4
6,010,228	-				-1.1
6,010,228	-				+0.4
6,010,278	+				+0.4
6,010,278	+				+0.4
6,010,278	+				-1.1
6,010,279	-				-0.5
6,010,279	-				-0.1
6,010,279	-				-0.6
6,010,279	-				-0.6
6,010,279	-				+0.4
6,010,352	+				-0.7
6,010,352	+				+0.2
6,010,352	+				-1.6
6,010,353	-				+0.0
6,010,353	-				+0.4
6,010,353	-				+0.1
6,010,353	-				-1.1
6,010,353	-				+0.3
6,010,493	+		Pf6N2E2_5211	0.20	-1.1
6,010,494	-		Pf6N2E2_5211	0.20	-0.6
6,010,494	-		Pf6N2E2_5211	0.20	-1.1
6,010,494	-		Pf6N2E2_5211	0.20	-0.6
6,010,494	-		Pf6N2E2_5211	0.20	+0.4
6,010,497	+		Pf6N2E2_5211	0.20	-1.6
6,010,497	+		Pf6N2E2_5211	0.20	-0.6
6,010,497	+		Pf6N2E2_5211	0.20	-0.6
6,010,497	+		Pf6N2E2_5211	0.20	-1.4
6,010,497	+		Pf6N2E2_5211	0.20	-2.2
6,010,497	+		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,498	-		Pf6N2E2_5211	0.20	+0.4
6,010,560	+		Pf6N2E2_5211	0.26	+0.4
6,010,561	-		Pf6N2E2_5211	0.26	-1.1
6,010,596	+		Pf6N2E2_5211	0.29	-1.1
6,010,597	-		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	-1.9
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-1.2
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	+0.4
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,598	+		Pf6N2E2_5211	0.29	-1.6
6,010,598	+		Pf6N2E2_5211	0.29	-1.1
6,010,598	+		Pf6N2E2_5211	0.29	-0.6
6,010,599	-		Pf6N2E2_5211	0.29	-1.1
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	+0.4
6,010,599	-		Pf6N2E2_5211	0.29	-0.9
6,010,624	-		Pf6N2E2_5211	0.31	-1.2
6,010,706	+		Pf6N2E2_5211	0.39	-0.6
6,010,713	-		Pf6N2E2_5211	0.39	-0.3
6,010,747	+		Pf6N2E2_5211	0.42	+0.4
6,010,767	+		Pf6N2E2_5211	0.44	-1.1
6,010,767	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	-0.6
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,769	+		Pf6N2E2_5211	0.44	+0.4
6,010,869	+		Pf6N2E2_5211	0.53	-0.6
6,010,869	+		Pf6N2E2_5211	0.53	-1.9
6,010,870	-		Pf6N2E2_5211	0.53	+0.4
6,010,873	+		Pf6N2E2_5211	0.53	+0.4
6,010,873	+		Pf6N2E2_5211	0.53	-1.1
6,010,874	-		Pf6N2E2_5211	0.54	-1.1
6,010,874	-		Pf6N2E2_5211	0.54	+0.4
6,010,874	-		Pf6N2E2_5211	0.54	-0.6
6,010,874	-		Pf6N2E2_5211	0.54	+0.0
6,010,885	+		Pf6N2E2_5211	0.55	+0.4
6,010,885	+		Pf6N2E2_5211	0.55	-0.6
6,010,886	-		Pf6N2E2_5211	0.55	-0.6
6,010,949	+		Pf6N2E2_5211	0.60	+0.4
6,010,949	+		Pf6N2E2_5211	0.60	-0.6
6,010,972	-		Pf6N2E2_5211	0.62	-1.1
6,010,972	-		Pf6N2E2_5211	0.62	-0.6
6,011,003	+		Pf6N2E2_5211	0.65	+0.4
6,011,003	+		Pf6N2E2_5211	0.65	-0.5
6,011,003	+		Pf6N2E2_5211	0.65	+0.4
6,011,004	-		Pf6N2E2_5211	0.65	+0.4
6,011,007	+		Pf6N2E2_5211	0.65	-0.6
6,011,007	+		Pf6N2E2_5211	0.65	-0.6
6,011,007	+		Pf6N2E2_5211	0.65	+0.4
6,011,007	+		Pf6N2E2_5211	0.65	+0.4
6,011,007	+		Pf6N2E2_5211	0.65	-0.6
6,011,008	-		Pf6N2E2_5211	0.66	+0.4
6,011,008	-		Pf6N2E2_5211	0.66	-1.6
6,011,008	-		Pf6N2E2_5211	0.66	-1.1
6,011,008	-		Pf6N2E2_5211	0.66	-0.6
6,011,037	+		Pf6N2E2_5211	0.68	-1.0
6,011,037	+		Pf6N2E2_5211	0.68	-0.5
6,011,037	+		Pf6N2E2_5211	0.68	-0.6
6,011,037	+		Pf6N2E2_5211	0.68	-1.1
6,011,037	+		Pf6N2E2_5211	0.68	-2.4
6,011,037	+		Pf6N2E2_5211	0.68	-1.6
6,011,037	+		Pf6N2E2_5211	0.68	-0.6
6,011,037	+		Pf6N2E2_5211	0.68	+0.1
6,011,037	+		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	-1.6
6,011,038	-		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	-0.4
6,011,038	-		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	+0.4
6,011,038	-		Pf6N2E2_5211	0.68	-0.6
6,011,120	+		Pf6N2E2_5211	0.75	-0.6
6,011,120	+		Pf6N2E2_5211	0.75	+0.4
6,011,120	+		Pf6N2E2_5211	0.75	-0.9
6,011,121	-		Pf6N2E2_5211	0.76	-0.8
6,011,121	-		Pf6N2E2_5211	0.76	+0.4
6,011,121	-		Pf6N2E2_5211	0.76	-0.6
6,011,145	+		Pf6N2E2_5211	0.78	-1.6
6,011,145	+		Pf6N2E2_5211	0.78	-1.1
6,011,146	-		Pf6N2E2_5211	0.78	-1.2
6,011,229	+		Pf6N2E2_5211	0.85	-0.8
6,011,230	-		Pf6N2E2_5211	0.85	-0.6
6,011,231	+		Pf6N2E2_5211	0.85	-0.6
6,011,231	+		Pf6N2E2_5211	0.85	-1.1
6,011,231	+		Pf6N2E2_5211	0.85	-2.1
6,011,231	+		Pf6N2E2_5211	0.85	-0.6
6,011,231	+		Pf6N2E2_5211	0.85	-1.4
6,011,231	+		Pf6N2E2_5211	0.85	-0.1
6,011,231	+		Pf6N2E2_5211	0.85	+0.4
6,011,231	+		Pf6N2E2_5211	0.85	-0.7
6,011,232	-		Pf6N2E2_5211	0.85	+0.4
6,011,232	-		Pf6N2E2_5211	0.85	-1.6
6,011,232	-		Pf6N2E2_5211	0.85	-1.6
6,011,255	+		Pf6N2E2_5211	0.88	+0.4
6,011,322	+				+0.4
6,011,322	+				-1.1
6,011,386	-				-0.4
6,011,404	-				-0.6
6,011,415	+				+0.4
6,011,515	-				+0.4
6,011,515	-				-0.3
6,011,586	-				+0.4
6,012,023	+		Pf6N2E2_5212	0.88	-0.6