Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_475

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
539,227	-				-0.5
539,309	+				-0.8
539,309	+				+0.3
539,309	+				+0.3
539,309	+				+0.3
539,309	+				-1.3
539,309	+				-1.0
539,309	+				+0.3
539,310	-				+0.3
539,310	-				+0.3
539,312	+				+0.3
539,577	+		Pf6N2E2_474	0.29	-1.2
539,577	+		Pf6N2E2_474	0.29	-0.7
539,578	-		Pf6N2E2_474	0.29	-0.7
539,578	-		Pf6N2E2_474	0.29	+0.3
539,578	-		Pf6N2E2_474	0.29	+0.3
539,697	+		Pf6N2E2_474	0.45	-0.9
539,705	+		Pf6N2E2_474	0.46	+0.3
539,706	-		Pf6N2E2_474	0.46	+0.3
540,198	+				+0.3
540,198	+				+0.3
540,710	+		Pf6N2E2_475	0.66	+0.3
540,711	-		Pf6N2E2_475	0.66	-0.7
540,711	-		Pf6N2E2_475	0.66	+0.3
540,800	+		Pf6N2E2_475	0.77	+0.3
540,801	-		Pf6N2E2_475	0.77	-0.7
540,801	-		Pf6N2E2_475	0.77	-0.9
540,839	+		Pf6N2E2_475	0.82	-1.9
540,839	+		Pf6N2E2_475	0.82	-1.3
540,839	+		Pf6N2E2_475	0.82	-0.7
540,840	-		Pf6N2E2_475	0.82	+0.3
540,840	-		Pf6N2E2_475	0.82	+0.3
540,840	-		Pf6N2E2_475	0.82	+0.3
540,840	-		Pf6N2E2_475	0.82	+0.3
540,840	-		Pf6N2E2_475	0.82	-1.3
540,845	+		Pf6N2E2_475	0.83	-0.7
540,882	-		Pf6N2E2_475	0.87	+0.3
540,981	+				+0.3
541,028	+				+0.3
541,028	+				-0.7
541,029	-				-0.6
541,029	-				+0.3
541,029	-				+0.3
541,029	-				+0.3
541,051	-				+0.3
541,373	+		Pf6N2E2_476	0.30	+0.3
541,373	+		Pf6N2E2_476	0.30	+0.3
541,405	-		Pf6N2E2_476	0.34	+0.3
541,615	+		Pf6N2E2_476	0.56	+0.3
541,616	-		Pf6N2E2_476	0.56	+0.3
541,919	+		Pf6N2E2_476	0.89	+0.3