Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4289

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
4,995,584	+		Pf6N2E2_4288	0.39	+0.5
4,995,585	-		Pf6N2E2_4288	0.39	+0.5
4,995,836	+		Pf6N2E2_4288	0.56	+0.5
4,995,836	+		Pf6N2E2_4288	0.56	-2.1
4,995,836	+		Pf6N2E2_4288	0.56	-1.1
4,995,836	+		Pf6N2E2_4288	0.56	-0.7
4,995,837	-		Pf6N2E2_4288	0.56	-0.5
4,995,837	-		Pf6N2E2_4288	0.56	-0.5
4,995,837	-		Pf6N2E2_4288	0.56	+0.5
4,995,837	-		Pf6N2E2_4288	0.56	+0.5
4,995,837	-		Pf6N2E2_4288	0.56	+0.5
4,995,933	+		Pf6N2E2_4288	0.62	-1.5
4,995,948	-		Pf6N2E2_4288	0.63	+0.5
4,995,948	-		Pf6N2E2_4288	0.63	-0.5
4,995,948	-		Pf6N2E2_4288	0.63	-1.8
4,995,960	-		Pf6N2E2_4288	0.64	-0.5
4,996,022	+		Pf6N2E2_4288	0.68	-1.3
4,996,023	-		Pf6N2E2_4288	0.68	-0.5
4,996,023	-		Pf6N2E2_4288	0.68	+0.5
4,996,070	+		Pf6N2E2_4288	0.71	-2.3
4,996,071	-		Pf6N2E2_4288	0.71	+0.5
4,996,400	+				-0.5
4,996,400	+				-4.0
4,996,400	+				-0.5
4,996,400	+				-0.9
4,996,401	-				-1.4
4,996,401	-				+0.5
4,996,401	-				+0.8
4,996,714	+				+0.5
4,996,714	+				-1.1
4,996,714	+				-1.1
4,996,714	+				-0.9
4,996,714	+				+0.5
4,996,714	+				-0.5
4,996,714	+				+0.5
4,996,714	+				-1.1
4,996,715	-				-0.4
4,996,715	-				+0.5
4,996,715	-				+0.5
4,996,715	-				-1.1
4,996,715	-				-0.6
4,996,715	-				-0.5
4,996,715	-				-0.5
4,996,715	-				+0.7
4,996,715	-				-0.5
4,996,816	+				+0.5
4,996,817	-				-0.7
4,996,817	-				+0.2
4,996,817	-				+0.5
4,996,881	-				-0.5
4,996,881	-				-0.2
4,996,881	-				-0.5
4,996,887	+				+0.5
4,996,887	+				-1.1
4,996,888	-				-0.7
4,996,888	-				+0.5
4,996,954	+				+0.5
4,996,955	-				-0.5
4,996,955	-				-0.2
4,996,955	-				-2.6
4,996,955	-				-1.1
4,997,039	+		Pf6N2E2_4289	0.10	+0.5
4,997,152	+		Pf6N2E2_4289	0.13	+0.5
4,997,532	+		Pf6N2E2_4289	0.21	+0.3
4,997,533	-		Pf6N2E2_4289	0.21	-0.5
4,997,570	+		Pf6N2E2_4289	0.22	-1.7
4,997,570	+		Pf6N2E2_4289	0.22	-0.6
4,997,570	+		Pf6N2E2_4289	0.22	-0.5
4,997,571	-		Pf6N2E2_4289	0.22	-1.5
4,997,571	-		Pf6N2E2_4289	0.22	-0.5
4,997,571	-		Pf6N2E2_4289	0.22	-1.2
4,997,571	-		Pf6N2E2_4289	0.22	-0.5
4,997,571	-		Pf6N2E2_4289	0.22	+0.5
4,997,571	-		Pf6N2E2_4289	0.22	-0.9
4,997,571	-		Pf6N2E2_4289	0.22	-3.3
4,997,571	-		Pf6N2E2_4289	0.22	-0.7
4,997,571	-		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	-1.1
4,997,572	+		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	+0.5
4,997,572	+		Pf6N2E2_4289	0.22	-0.5
4,997,572	+		Pf6N2E2_4289	0.22	-1.1
4,997,573	-		Pf6N2E2_4289	0.22	-0.5
4,997,573	-		Pf6N2E2_4289	0.22	+0.5
4,997,573	-		Pf6N2E2_4289	0.22	-0.8
4,997,573	-		Pf6N2E2_4289	0.22	-1.1
4,997,573	-		Pf6N2E2_4289	0.22	-0.5
4,997,573	-		Pf6N2E2_4289	0.22	-1.1
4,997,573	-		Pf6N2E2_4289	0.22	-1.5
4,997,587	+		Pf6N2E2_4289	0.22	-0.5
4,997,588	-		Pf6N2E2_4289	0.22	-1.1
4,997,588	-		Pf6N2E2_4289	0.22	-1.1
4,997,711	+		Pf6N2E2_4289	0.25	-0.5
4,997,711	+		Pf6N2E2_4289	0.25	+0.5
4,997,711	+		Pf6N2E2_4289	0.25	-1.9
4,997,712	-		Pf6N2E2_4289	0.25	-0.4
4,997,712	-		Pf6N2E2_4289	0.25	+0.5
4,997,712	-		Pf6N2E2_4289	0.25	-0.5
4,997,712	-		Pf6N2E2_4289	0.25	-0.8
4,997,712	-		Pf6N2E2_4289	0.25	-0.7
4,997,794	+		Pf6N2E2_4289	0.27	+0.4
4,997,794	+		Pf6N2E2_4289	0.27	+0.5
4,997,794	+		Pf6N2E2_4289	0.27	+0.5
4,997,794	+		Pf6N2E2_4289	0.27	-0.5
4,997,794	+		Pf6N2E2_4289	0.27	+0.5
4,997,794	+		Pf6N2E2_4289	0.27	+1.5
4,997,794	+		Pf6N2E2_4289	0.27	-0.5
4,997,794	+		Pf6N2E2_4289	0.27	-0.6
4,997,794	+		Pf6N2E2_4289	0.27	-0.5
4,997,795	-		Pf6N2E2_4289	0.27	-0.5
4,997,795	-		Pf6N2E2_4289	0.27	-1.1
4,997,795	-		Pf6N2E2_4289	0.27	-0.5
4,997,795	-		Pf6N2E2_4289	0.27	+0.5
4,997,920	+		Pf6N2E2_4289	0.30	-0.5
4,997,920	+		Pf6N2E2_4289	0.30	-1.1
4,997,920	+		Pf6N2E2_4289	0.30	-0.6
4,997,920	+		Pf6N2E2_4289	0.30	+0.5
4,997,921	-		Pf6N2E2_4289	0.30	-0.7
4,997,921	-		Pf6N2E2_4289	0.30	-0.5
4,997,921	-		Pf6N2E2_4289	0.30	-1.1
4,997,921	-		Pf6N2E2_4289	0.30	+0.5
4,998,066	+		Pf6N2E2_4289	0.33	-0.5
4,998,067	-		Pf6N2E2_4289	0.33	-0.5
4,998,067	-		Pf6N2E2_4289	0.33	-1.5
4,998,080	+		Pf6N2E2_4289	0.33	-0.5
4,998,103	+		Pf6N2E2_4289	0.34	-0.1
4,998,181	+		Pf6N2E2_4289	0.35	-1.4
4,998,182	-		Pf6N2E2_4289	0.35	-0.5
4,998,206	+		Pf6N2E2_4289	0.36	+0.5
4,998,206	+		Pf6N2E2_4289	0.36	+0.5
4,998,206	+		Pf6N2E2_4289	0.36	-1.5
4,998,206	+		Pf6N2E2_4289	0.36	-0.4
4,998,207	-		Pf6N2E2_4289	0.36	+0.5
4,998,207	-		Pf6N2E2_4289	0.36	-1.2
4,998,207	-		Pf6N2E2_4289	0.36	+0.1
4,998,207	-		Pf6N2E2_4289	0.36	+0.1
4,998,214	+		Pf6N2E2_4289	0.36	+0.5
4,998,214	+		Pf6N2E2_4289	0.36	+0.5
4,998,214	+		Pf6N2E2_4289	0.36	-0.5
4,998,214	+		Pf6N2E2_4289	0.36	+0.5
4,998,214	+		Pf6N2E2_4289	0.36	-0.5
4,998,214	+		Pf6N2E2_4289	0.36	-1.1
4,998,215	-		Pf6N2E2_4289	0.36	+0.5
4,998,215	-		Pf6N2E2_4289	0.36	-1.1
4,998,215	-		Pf6N2E2_4289	0.36	-0.5
4,998,215	-		Pf6N2E2_4289	0.36	-0.2
4,998,215	-		Pf6N2E2_4289	0.36	-1.1
4,998,215	-		Pf6N2E2_4289	0.36	-0.5
4,998,215	-		Pf6N2E2_4289	0.36	-1.8
4,998,215	-		Pf6N2E2_4289	0.36	+0.4
4,998,255	-		Pf6N2E2_4289	0.37	+0.5
4,998,516	+		Pf6N2E2_4289	0.43	-1.1
4,998,517	-		Pf6N2E2_4289	0.43	+0.5
4,998,568	+		Pf6N2E2_4289	0.44	+0.5
4,998,569	-		Pf6N2E2_4289	0.44	-0.5
4,998,700	+		Pf6N2E2_4289	0.47	+0.5
4,998,701	-		Pf6N2E2_4289	0.47	+0.5
4,998,701	-		Pf6N2E2_4289	0.47	-0.0
4,998,821	+		Pf6N2E2_4289	0.49	-1.1
4,999,264	+		Pf6N2E2_4289	0.59	-1.1
4,999,264	+		Pf6N2E2_4289	0.59	-0.3
4,999,264	+		Pf6N2E2_4289	0.59	-1.1
4,999,264	+		Pf6N2E2_4289	0.59	-0.9
4,999,265	-		Pf6N2E2_4289	0.59	-1.4
4,999,265	-		Pf6N2E2_4289	0.59	-0.5
4,999,265	-		Pf6N2E2_4289	0.59	+0.2
4,999,336	+		Pf6N2E2_4289	0.60	-0.5
4,999,336	+		Pf6N2E2_4289	0.60	-0.5
4,999,336	+		Pf6N2E2_4289	0.60	-0.5
4,999,337	-		Pf6N2E2_4289	0.60	+0.0
4,999,337	-		Pf6N2E2_4289	0.60	-0.5
4,999,337	-		Pf6N2E2_4289	0.60	+0.5
4,999,337	-		Pf6N2E2_4289	0.60	-1.1
4,999,337	-		Pf6N2E2_4289	0.60	-2.3
4,999,337	-		Pf6N2E2_4289	0.60	+0.5
4,999,337	-		Pf6N2E2_4289	0.60	-0.1
4,999,337	-		Pf6N2E2_4289	0.60	+0.5
4,999,398	+		Pf6N2E2_4289	0.62	+0.5
4,999,399	-		Pf6N2E2_4289	0.62	+0.2
4,999,399	-		Pf6N2E2_4289	0.62	-0.5
4,999,399	-		Pf6N2E2_4289	0.62	-0.5
4,999,567	+		Pf6N2E2_4289	0.65	-0.5
4,999,567	+		Pf6N2E2_4289	0.65	-2.1
4,999,567	+		Pf6N2E2_4289	0.65	+0.5
4,999,567	+		Pf6N2E2_4289	0.65	-0.8
4,999,567	+		Pf6N2E2_4289	0.65	-1.5
4,999,568	-		Pf6N2E2_4289	0.65	-0.6
4,999,568	-		Pf6N2E2_4289	0.65	-1.8
4,999,568	-		Pf6N2E2_4289	0.65	-4.0
4,999,632	+		Pf6N2E2_4289	0.67	+0.5
4,999,633	-		Pf6N2E2_4289	0.67	-1.1
4,999,644	+		Pf6N2E2_4289	0.67	-0.8
4,999,645	-		Pf6N2E2_4289	0.67	+0.5
4,999,645	-		Pf6N2E2_4289	0.67	-1.8
4,999,698	+		Pf6N2E2_4289	0.68	-0.5
4,999,699	-		Pf6N2E2_4289	0.68	+0.5
4,999,699	-		Pf6N2E2_4289	0.68	-2.3
4,999,699	-		Pf6N2E2_4289	0.68	+0.5
4,999,699	-		Pf6N2E2_4289	0.68	-0.1
4,999,765	+		Pf6N2E2_4289	0.70	+0.5
4,999,765	+		Pf6N2E2_4289	0.70	+0.5
4,999,765	+		Pf6N2E2_4289	0.70	-0.5
5,000,017	+		Pf6N2E2_4289	0.75	-0.5
5,000,018	-		Pf6N2E2_4289	0.75	+0.5
5,000,018	-		Pf6N2E2_4289	0.75	-0.8
5,000,018	-		Pf6N2E2_4289	0.75	-0.5
5,000,018	-		Pf6N2E2_4289	0.75	-0.5
5,000,047	+		Pf6N2E2_4289	0.76	-1.0
5,000,047	+		Pf6N2E2_4289	0.76	-1.1
5,000,047	+		Pf6N2E2_4289	0.76	-0.6
5,000,048	-		Pf6N2E2_4289	0.76	-0.5
5,000,048	-		Pf6N2E2_4289	0.76	-0.5
5,000,268	+		Pf6N2E2_4289	0.81	-0.6
5,000,268	+		Pf6N2E2_4289	0.81	+0.5
5,000,269	-		Pf6N2E2_4289	0.81	+0.5
5,000,269	-		Pf6N2E2_4289	0.81	+0.5
5,000,309	+		Pf6N2E2_4289	0.82	+0.5
5,000,310	-		Pf6N2E2_4289	0.82	-0.5
5,000,310	-		Pf6N2E2_4289	0.82	+0.5
5,000,416	+		Pf6N2E2_4289	0.84	-0.5
5,000,416	+		Pf6N2E2_4289	0.84	-0.5
5,000,416	+		Pf6N2E2_4289	0.84	-0.5
5,000,416	+		Pf6N2E2_4289	0.84	-2.3
5,000,542	+		Pf6N2E2_4289	0.87	+0.5
5,000,542	+		Pf6N2E2_4289	0.87	-1.5
5,000,543	-		Pf6N2E2_4289	0.87	-0.5
5,000,543	-		Pf6N2E2_4289	0.87	-1.5
5,000,543	-		Pf6N2E2_4289	0.87	+0.5
5,000,557	+		Pf6N2E2_4289	0.87	-0.5
5,000,557	+		Pf6N2E2_4289	0.87	-1.1
5,000,557	+		Pf6N2E2_4289	0.87	+0.5
5,000,558	-		Pf6N2E2_4289	0.87	+0.5
5,000,728	+				+0.5
5,000,728	+				-0.5
5,000,869	-				-0.5
5,000,869	-				-0.5
5,000,884	+				+0.5
5,000,884	+				-0.6
5,000,884	+				-0.5
5,000,884	+				-1.2
5,000,885	-				+0.5
5,000,885	-				+1.1
5,000,885	-				+0.5
5,000,885	-				+0.5
5,000,885	-				+0.5
5,000,993	+				-2.1
5,000,993	+				+0.5
5,000,993	+				+0.5
5,000,993	+				-0.5
5,000,993	+				-0.5
5,000,994	-				+0.5
5,001,022	+				-2.6
5,001,023	-				-0.4
5,001,023	-				-0.5
5,001,088	-				-0.5
5,001,137	+				-0.7
5,001,180	+				-1.1
5,001,180	+				-1.1
5,001,180	+				-1.1
5,001,181	-				-0.8
5,001,181	-				+0.5
5,001,181	-				-0.5
5,001,181	-				+0.5
5,001,181	-				+0.5
5,001,222	+				+0.5
5,001,223	-				-0.5
5,001,249	+				+0.5
5,001,249	+				+0.5
5,001,249	+				-0.7
5,001,250	-				-0.5
5,001,250	-				-0.5
5,001,253	+				-0.5
5,001,253	+				+0.5
5,001,253	+				-0.5
5,001,253	+				-1.1
5,001,253	+				+0.5
5,001,253	+				+0.2
5,001,253	+				-0.5
5,001,253	+				-0.5
5,001,253	+				+0.5
5,001,253	+				+0.5
5,001,253	+				-1.8
5,001,253	+				-1.1
5,001,253	+				-0.5
5,001,253	+				-0.6
5,001,253	+				-0.5
5,001,253	+				+0.5
5,001,253	+				-1.5
5,001,253	+				-0.8
5,001,253	+				-1.1
5,001,253	+				-0.5
5,001,253	+				-1.8
5,001,253	+				-0.5
5,001,253	+				-0.8
5,001,253	+				-0.7
5,001,253	+				-0.6
5,001,253	+				-0.5
5,001,253	+				+0.5
5,001,253	+				-1.5
5,001,253	+				-0.7
5,001,254	-				-0.3
5,001,254	-				+0.5
5,001,254	-				+1.1
5,001,254	-				+0.5
5,001,254	-				-1.6
5,001,254	-				+0.5
5,001,254	-				-2.2
5,001,254	-				-1.5
5,001,254	-				-1.8
5,001,254	-				-0.8
5,001,254	-				-0.2
5,001,254	-				+0.5
5,001,254	-				-0.7
5,001,254	-				+0.5
5,001,254	-				-0.8
5,001,254	-				-0.5
5,001,254	-				-1.1
5,001,254	-				-1.1
5,001,254	-				-0.1
5,001,254	-				-0.3
5,001,254	-				-0.5
5,001,254	-				+0.5
5,001,254	-				+0.5
5,001,254	-				-0.5
5,001,254	-				-0.1
5,001,254	-				-0.5
5,001,254	-				+0.5
5,001,254	-				-0.1
5,001,257	+				+0.5
5,001,257	+				-1.1
5,001,257	+				-1.8
5,001,257	+				-1.1
5,001,257	+				+0.0
5,001,257	+				+0.5
5,001,257	+				-0.5
5,001,257	+				-0.5
5,001,257	+				-1.8
5,001,257	+				+0.5
5,001,257	+				-1.0
5,001,257	+				+0.1
5,001,257	+				-0.5
5,001,257	+				-1.6
5,001,257	+				+0.5
5,001,257	+				-1.0
5,001,257	+				-1.1
5,001,257	+				+0.5
5,001,258	-				-1.1
5,001,258	-				+0.5
5,001,258	-				-0.4
5,001,258	-				-0.5
5,001,258	-				-1.1
5,001,258	-				-0.8
5,001,258	-				+0.5
5,001,258	-				-1.5
5,001,258	-				-0.5
5,001,258	-				-1.8
5,001,259	+				-0.1
5,001,260	-				+0.5
5,001,294	+				-1.1
5,001,321	+				+0.5
5,001,322	-				-0.5
5,001,333	+				+0.5
5,001,406	+				-0.5
5,001,406	+				-0.5
5,001,407	-				+0.5
5,001,407	-				-0.7
5,001,407	-				-0.5
5,001,407	-				-0.5
5,001,407	-				-0.5
5,001,407	-				-0.5
5,001,407	-				+0.5
5,001,408	+				-0.5
5,001,408	+				-1.1
5,001,408	+				+0.5
5,001,408	+				-0.5
5,001,408	+				+0.5
5,001,408	+				+0.5
5,001,408	+				+0.5
5,001,409	-				+0.5
5,001,409	-				-1.5
5,001,409	-				+0.5
5,001,409	-				-0.5
5,001,439	-				-1.1
5,001,552	+		Pf6N2E2_4290	0.20	+0.5
5,001,552	+		Pf6N2E2_4290	0.20	-0.5
5,001,552	+		Pf6N2E2_4290	0.20	-1.8
5,001,552	+		Pf6N2E2_4290	0.20	-0.5
5,001,552	+		Pf6N2E2_4290	0.20	-1.1
5,001,553	-		Pf6N2E2_4290	0.20	-0.5
5,001,553	-		Pf6N2E2_4290	0.20	-0.5
5,001,553	-		Pf6N2E2_4290	0.20	-0.7
5,001,553	-		Pf6N2E2_4290	0.20	+0.5
5,001,553	-		Pf6N2E2_4290	0.20	-0.5
5,001,553	-		Pf6N2E2_4290	0.20	+0.5
5,001,553	-		Pf6N2E2_4290	0.20	-0.5
5,001,567	+		Pf6N2E2_4290	0.21	+0.5
5,001,568	-		Pf6N2E2_4290	0.21	-0.5
5,001,759	+		Pf6N2E2_4290	0.39	+0.5
5,001,759	+		Pf6N2E2_4290	0.39	+0.5
5,001,759	+		Pf6N2E2_4290	0.39	-1.1
5,001,760	-		Pf6N2E2_4290	0.39	+0.5
5,001,760	-		Pf6N2E2_4290	0.39	-0.5
5,001,760	-		Pf6N2E2_4290	0.39	-1.1
5,001,760	-		Pf6N2E2_4290	0.39	+0.5
5,001,777	+		Pf6N2E2_4290	0.40	-0.3
5,001,777	+		Pf6N2E2_4290	0.40	-1.8
5,001,778	-		Pf6N2E2_4290	0.41	-0.5
5,001,778	-		Pf6N2E2_4290	0.41	-0.5
5,001,778	-		Pf6N2E2_4290	0.41	+0.5
5,001,825	+		Pf6N2E2_4290	0.45	+0.2
5,001,826	-		Pf6N2E2_4290	0.45	-0.5
5,002,038	+		Pf6N2E2_4290	0.64	-1.5
5,002,038	+		Pf6N2E2_4290	0.64	-0.5
5,002,038	+		Pf6N2E2_4290	0.64	-2.6
5,002,038	+		Pf6N2E2_4290	0.64	-0.5
5,002,038	+		Pf6N2E2_4290	0.64	-0.5
5,002,039	-		Pf6N2E2_4290	0.64	-0.5
5,002,039	-		Pf6N2E2_4290	0.64	-0.5
5,002,039	-		Pf6N2E2_4290	0.64	-0.5
5,002,039	-		Pf6N2E2_4290	0.64	+0.5
5,002,039	-		Pf6N2E2_4290	0.64	+0.5
5,002,039	-		Pf6N2E2_4290	0.64	-1.3
5,002,039	-		Pf6N2E2_4290	0.64	-0.5
5,002,039	-		Pf6N2E2_4290	0.64	-1.8
5,002,039	-		Pf6N2E2_4290	0.64	-0.6
5,002,044	+		Pf6N2E2_4290	0.65	-1.1
5,002,044	+		Pf6N2E2_4290	0.65	+0.5
5,002,044	+		Pf6N2E2_4290	0.65	-0.1
5,002,045	-		Pf6N2E2_4290	0.65	+0.5
5,002,045	-		Pf6N2E2_4290	0.65	-0.5
5,002,045	-		Pf6N2E2_4290	0.65	-1.1