Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4231

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
4,920,206	+		Pf6N2E2_4230	0.38	+0.5
4,920,206	+		Pf6N2E2_4230	0.38	+0.5
4,920,207	-		Pf6N2E2_4230	0.38	+0.5
4,920,207	-		Pf6N2E2_4230	0.38	-0.9
4,920,207	-		Pf6N2E2_4230	0.38	+0.5
4,920,207	-		Pf6N2E2_4230	0.38	-2.3
4,920,402	+		Pf6N2E2_4230	0.57	+0.3
4,920,402	+		Pf6N2E2_4230	0.57	-0.5
4,920,402	+		Pf6N2E2_4230	0.57	+0.5
4,920,402	+		Pf6N2E2_4230	0.57	-1.0
4,920,402	+		Pf6N2E2_4230	0.57	-0.5
4,920,402	+		Pf6N2E2_4230	0.57	+0.5
4,920,402	+		Pf6N2E2_4230	0.57	+0.5
4,920,403	-		Pf6N2E2_4230	0.57	+0.5
4,920,403	-		Pf6N2E2_4230	0.57	+0.5
4,920,403	-		Pf6N2E2_4230	0.57	+0.5
4,920,403	-		Pf6N2E2_4230	0.57	-0.5
4,920,403	-		Pf6N2E2_4230	0.57	+0.5
4,920,403	-		Pf6N2E2_4230	0.57	-0.3
4,920,403	-		Pf6N2E2_4230	0.57	-0.5
4,920,403	-		Pf6N2E2_4230	0.57	-1.0
4,920,403	-		Pf6N2E2_4230	0.57	+0.5
4,920,518	+		Pf6N2E2_4230	0.69	-0.5
4,920,519	-		Pf6N2E2_4230	0.69	+0.5
4,920,519	-		Pf6N2E2_4230	0.69	-0.5
4,920,519	-		Pf6N2E2_4230	0.69	-0.5
4,920,735	+				-0.5
4,920,735	+				-0.5
4,920,736	-				+0.5
4,920,736	-				+0.5
4,920,736	-				-1.0
4,920,801	-				-0.8
4,920,817	-				-0.5
4,920,861	-				-0.5
4,920,867	-				-1.0
4,920,873	+				+0.5
4,920,873	+				+0.5
4,920,874	-				-0.5
4,920,874	-				-0.5
4,920,893	+				-0.7
4,920,915	-				-0.5
4,920,915	-				+0.5
4,920,915	-				-0.9
4,920,915	-				-1.5
4,921,074	+				+0.5
4,921,074	+				-0.7
4,921,074	+				-0.6
4,921,074	+				-1.3
4,921,074	+				-1.0
4,921,074	+				-0.8
4,921,074	+				-0.5
4,921,075	-				+0.5
4,921,075	-				-1.5
4,921,075	-				+0.5
4,921,075	-				-1.0
4,921,075	-				+0.5
4,921,091	-				-0.7
4,921,200	+				+0.5
4,921,200	+				-0.9
4,921,322	+		Pf6N2E2_4231	0.22	-0.4
4,921,322	+		Pf6N2E2_4231	0.22	+0.5
4,921,323	-		Pf6N2E2_4231	0.22	+0.3
4,921,323	-		Pf6N2E2_4231	0.22	-1.0
4,921,363	+		Pf6N2E2_4231	0.26	-0.8
4,921,363	+		Pf6N2E2_4231	0.26	-1.2
4,921,366	+		Pf6N2E2_4231	0.27	-0.5
4,921,366	+		Pf6N2E2_4231	0.27	+0.5
4,921,366	+		Pf6N2E2_4231	0.27	+0.5
4,921,367	-		Pf6N2E2_4231	0.27	-1.0
4,921,386	+		Pf6N2E2_4231	0.29	+0.5
4,921,386	+		Pf6N2E2_4231	0.29	-1.8
4,921,386	+		Pf6N2E2_4231	0.29	-0.6
4,921,386	+		Pf6N2E2_4231	0.29	+0.5
4,921,386	+		Pf6N2E2_4231	0.29	-0.5
4,921,386	+		Pf6N2E2_4231	0.29	-0.5
4,921,386	+		Pf6N2E2_4231	0.29	+0.5
4,921,386	+		Pf6N2E2_4231	0.29	-1.0
4,921,386	+		Pf6N2E2_4231	0.29	-1.9
4,921,386	+		Pf6N2E2_4231	0.29	+0.5
4,921,386	+		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	-0.5
4,921,387	-		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	-1.0
4,921,387	-		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	-0.7
4,921,387	-		Pf6N2E2_4231	0.29	+0.2
4,921,387	-		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	-1.0
4,921,387	-		Pf6N2E2_4231	0.29	-1.0
4,921,387	-		Pf6N2E2_4231	0.29	+0.5
4,921,387	-		Pf6N2E2_4231	0.29	-1.8
4,921,392	+		Pf6N2E2_4231	0.29	-0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.8
4,921,392	+		Pf6N2E2_4231	0.29	-0.5
4,921,392	+		Pf6N2E2_4231	0.29	-1.0
4,921,392	+		Pf6N2E2_4231	0.29	+0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.7
4,921,392	+		Pf6N2E2_4231	0.29	-1.5
4,921,392	+		Pf6N2E2_4231	0.29	-1.5
4,921,392	+		Pf6N2E2_4231	0.29	-1.3
4,921,392	+		Pf6N2E2_4231	0.29	+0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.7
4,921,392	+		Pf6N2E2_4231	0.29	+0.5
4,921,392	+		Pf6N2E2_4231	0.29	-0.5
4,921,392	+		Pf6N2E2_4231	0.29	-1.0
4,921,393	-		Pf6N2E2_4231	0.29	-0.5
4,921,393	-		Pf6N2E2_4231	0.29	-1.0
4,921,393	-		Pf6N2E2_4231	0.29	-0.5
4,921,435	-		Pf6N2E2_4231	0.34	-0.5
4,921,608	+		Pf6N2E2_4231	0.53	+0.5
4,921,617	+		Pf6N2E2_4231	0.54	+0.5
4,921,617	+		Pf6N2E2_4231	0.54	-0.5
4,921,618	-		Pf6N2E2_4231	0.54	-1.0
4,921,703	-		Pf6N2E2_4231	0.63	-0.2
4,921,815	+		Pf6N2E2_4231	0.75	-0.5
4,921,815	+		Pf6N2E2_4231	0.75	-1.5
4,921,816	-		Pf6N2E2_4231	0.75	-0.5
4,921,816	-		Pf6N2E2_4231	0.75	+0.5
4,921,909	-		Pf6N2E2_4231	0.85	-1.0
4,921,976	+				-0.7
4,921,976	+				-0.5
4,921,977	-				-2.0
4,922,040	-				-1.0
4,922,051	+				-1.0
4,922,052	-				-0.5
4,922,052	-				-1.6
4,922,186	-				-1.0
4,922,186	-				-0.5
4,922,335	+		Pf6N2E2_4232	0.23	-0.5
4,922,336	-		Pf6N2E2_4232	0.23	+0.5
4,922,336	-		Pf6N2E2_4232	0.23	-1.5
4,922,362	+		Pf6N2E2_4232	0.25	+0.5
4,922,363	-		Pf6N2E2_4232	0.26	+1.5
4,922,363	-		Pf6N2E2_4232	0.26	+0.5
4,922,373	+		Pf6N2E2_4232	0.27	-1.0
4,922,440	+		Pf6N2E2_4232	0.33	-0.5
4,922,440	+		Pf6N2E2_4232	0.33	-1.0
4,922,440	+		Pf6N2E2_4232	0.33	-0.7
4,922,440	+		Pf6N2E2_4232	0.33	-0.4
4,922,440	+		Pf6N2E2_4232	0.33	-1.5
4,922,440	+		Pf6N2E2_4232	0.33	-0.8
4,922,440	+		Pf6N2E2_4232	0.33	-1.0
4,922,440	+		Pf6N2E2_4232	0.33	-0.5
4,922,441	-		Pf6N2E2_4232	0.33	+0.5
4,922,441	-		Pf6N2E2_4232	0.33	-0.5
4,922,441	-		Pf6N2E2_4232	0.33	-0.5
4,922,441	-		Pf6N2E2_4232	0.33	+0.5
4,922,484	+		Pf6N2E2_4232	0.38	-0.5
4,922,501	+		Pf6N2E2_4232	0.39	+0.5
4,922,551	+		Pf6N2E2_4232	0.45	+0.5
4,922,552	-		Pf6N2E2_4232	0.45	+0.5
4,922,623	+		Pf6N2E2_4232	0.52	+0.5
4,922,710	+		Pf6N2E2_4232	0.61	-1.8
4,922,711	-		Pf6N2E2_4232	0.61	-0.0
4,922,753	+		Pf6N2E2_4232	0.65	-0.5
4,922,753	+		Pf6N2E2_4232	0.65	-1.0
4,922,754	-		Pf6N2E2_4232	0.65	+0.5
4,922,882	+		Pf6N2E2_4232	0.78	-0.7
4,922,882	+		Pf6N2E2_4232	0.78	-0.5
4,922,882	+		Pf6N2E2_4232	0.78	-0.5
4,922,882	+		Pf6N2E2_4232	0.78	+0.5
4,922,882	+		Pf6N2E2_4232	0.78	-0.7
4,922,882	+		Pf6N2E2_4232	0.78	+0.5
4,922,882	+		Pf6N2E2_4232	0.78	+0.5
4,922,882	+		Pf6N2E2_4232	0.78	-1.0
4,922,882	+		Pf6N2E2_4232	0.78	-0.5
4,922,883	-		Pf6N2E2_4232	0.78	+0.3
4,922,883	-		Pf6N2E2_4232	0.78	-0.7
4,922,883	-		Pf6N2E2_4232	0.78	-1.5
4,922,883	-		Pf6N2E2_4232	0.78	+0.5
4,922,883	-		Pf6N2E2_4232	0.78	+0.5
4,922,883	-		Pf6N2E2_4232	0.78	-0.5
4,922,883	-		Pf6N2E2_4232	0.78	-1.0
4,922,883	-		Pf6N2E2_4232	0.78	+0.5
4,922,886	+		Pf6N2E2_4232	0.78	-0.5
4,922,886	+		Pf6N2E2_4232	0.78	-0.1
4,922,887	-		Pf6N2E2_4232	0.78	+0.5
4,922,956	+		Pf6N2E2_4232	0.85	+0.5
4,922,957	-		Pf6N2E2_4232	0.86	+0.5
4,922,957	-		Pf6N2E2_4232	0.86	+0.5
4,922,957	-		Pf6N2E2_4232	0.86	+0.1
4,922,990	-		Pf6N2E2_4232	0.89	-0.6
4,923,001	+				-0.8
4,923,001	+				-1.0
4,923,001	+				+0.5
4,923,002	-				+0.5
4,923,002	-				-1.0
4,923,002	-				-1.3
4,923,044	+				-0.5
4,923,044	+				-1.1