Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2359

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
2,792,296	-		Pf6N2E2_2358	0.16	+0.3
2,792,345	+		Pf6N2E2_2358	0.20	+0.3
2,792,345	+		Pf6N2E2_2358	0.20	+0.3
2,792,468	-		Pf6N2E2_2358	0.31	+0.3
2,792,504	-		Pf6N2E2_2358	0.35	+0.3
2,792,542	+		Pf6N2E2_2358	0.38	-1.3
2,792,543	-		Pf6N2E2_2358	0.38	+0.3
2,792,543	-		Pf6N2E2_2358	0.38	+0.3
2,792,559	-		Pf6N2E2_2358	0.40	-0.7
2,792,630	-		Pf6N2E2_2358	0.46	-0.3
2,792,633	+		Pf6N2E2_2358	0.46	-0.7
2,792,634	-		Pf6N2E2_2358	0.46	+0.3
2,792,664	+		Pf6N2E2_2358	0.49	-0.4
2,792,664	+		Pf6N2E2_2358	0.49	-0.3
2,792,664	+		Pf6N2E2_2358	0.49	+0.3
2,792,664	+		Pf6N2E2_2358	0.49	-0.5
2,792,664	+		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	-1.3
2,792,665	-		Pf6N2E2_2358	0.49	-0.7
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,698	-		Pf6N2E2_2358	0.52	+1.9
2,793,126	-				+0.3
2,793,126	-				+0.3
2,793,204	-				-0.8
2,793,410	-		Pf6N2E2_2359	0.16	+0.3
2,793,561	+		Pf6N2E2_2359	0.29	-0.7
2,793,667	+		Pf6N2E2_2359	0.39	-0.7
2,793,667	+		Pf6N2E2_2359	0.39	+0.3
2,793,667	+		Pf6N2E2_2359	0.39	-1.7
2,793,667	+		Pf6N2E2_2359	0.39	-0.7
2,793,668	-		Pf6N2E2_2359	0.39	+0.3
2,793,668	-		Pf6N2E2_2359	0.39	+0.3
2,793,934	+		Pf6N2E2_2359	0.63	+0.3
2,793,934	+		Pf6N2E2_2359	0.63	-0.7
2,793,934	+		Pf6N2E2_2359	0.63	-1.7
2,794,112	+				-0.7
2,794,115	+		Pf6N2E2_2359	0.79	+0.3
2,794,115	+		Pf6N2E2_2359	0.79	+0.3
2,794,115	+		Pf6N2E2_2359	0.79	-2.1
2,794,115	+		Pf6N2E2_2359	0.79	-1.5
2,794,116	-		Pf6N2E2_2359	0.79	+0.3
2,794,116	-		Pf6N2E2_2359	0.79	+0.3
2,794,261	-				+0.3
2,794,589	+				+0.3
2,794,589	+				+0.3
2,794,589	+				+0.3
2,794,589	+				-0.7
2,794,590	-				+0.3
2,794,590	-				-0.9
2,794,590	-				+0.3
2,794,593	+				+0.3
2,794,594	-				-1.7
2,794,601	-				+0.3
2,794,735	+				+0.3
2,794,736	-				+0.3
2,795,210	-		Pf6N2E2_2360	0.35	-0.7
2,795,305	-		Pf6N2E2_2360	0.41	+0.3