Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1943

Experiment: Ying_Nucleobase14 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep C; time point 3
2,304,507	+		Pf6N2E2_1942	0.49	-1.3
2,304,508	-		Pf6N2E2_1942	0.49	+0.3
2,304,508	-		Pf6N2E2_1942	0.49	+0.3
2,304,543	+		Pf6N2E2_1942	0.51	+0.3
2,304,594	-		Pf6N2E2_1942	0.55	+0.3
2,304,601	+		Pf6N2E2_1942	0.56	-0.7
2,304,620	+		Pf6N2E2_1942	0.57	+0.3
2,304,673	-		Pf6N2E2_1942	0.61	+0.3
2,304,675	+		Pf6N2E2_1942	0.61	+0.3
2,304,721	+		Pf6N2E2_1942	0.65	-0.7
2,304,721	+		Pf6N2E2_1942	0.65	+0.3
2,304,722	-		Pf6N2E2_1942	0.65	+0.3
2,304,822	+		Pf6N2E2_1942	0.72	+0.3
2,304,851	+		Pf6N2E2_1942	0.74	-1.0
2,304,851	+		Pf6N2E2_1942	0.74	-0.6
2,304,852	-		Pf6N2E2_1942	0.74	-1.3
2,304,874	+		Pf6N2E2_1942	0.76	+0.3
2,304,883	-		Pf6N2E2_1942	0.77	+0.3
2,304,886	-		Pf6N2E2_1942	0.77	+0.3
2,305,062	+				+0.3
2,305,062	+				-0.7
2,305,063	-				+0.3
2,305,065	+				-1.2
2,305,066	-				-0.7
2,305,066	-				+0.3
2,305,117	+				-0.7
2,305,118	-				+0.3
2,305,188	+				+0.3
2,305,202	+				+0.3
2,305,203	-				+0.3
2,305,343	+				-0.7
2,305,343	+				-1.0
2,305,404	+				+0.1
2,305,405	-				+0.3
2,305,405	-				-0.7
2,305,406	+				-0.6
2,305,406	+				+0.3
2,305,406	+				-1.1
2,305,407	-				-0.7
2,305,429	-				-0.7
2,305,481	+		Pf6N2E2_1943	0.16	-1.6
2,305,481	+		Pf6N2E2_1943	0.16	-0.7
2,305,481	+		Pf6N2E2_1943	0.16	-1.0
2,305,482	-		Pf6N2E2_1943	0.17	+0.3
2,305,482	-		Pf6N2E2_1943	0.17	+0.3
2,305,485	+		Pf6N2E2_1943	0.19	-1.3
2,305,511	+		Pf6N2E2_1943	0.38	-1.9
2,305,511	+		Pf6N2E2_1943	0.38	+0.3
2,305,512	-		Pf6N2E2_1943	0.38	+0.3
2,305,512	-		Pf6N2E2_1943	0.38	-0.7
2,305,517	+		Pf6N2E2_1943	0.42	+0.3
2,305,517	+		Pf6N2E2_1943	0.42	+0.3
2,305,518	-		Pf6N2E2_1943	0.43	-0.7
2,305,545	+		Pf6N2E2_1943	0.62	+0.3
2,305,546	-		Pf6N2E2_1943	0.62	+0.3
2,305,581	+		Pf6N2E2_1943	0.87	-0.7
2,305,646	+				+0.3
2,305,647	-				+0.3
2,305,687	+				-0.7
2,305,688	-				+0.0
2,305,688	-				-0.7
2,305,688	-				-0.3
2,306,556	+				-0.9
2,306,570	+				+0.3
2,306,570	+				-0.8
2,306,580	+				-0.7
2,306,580	+				-0.7
2,306,580	+				+0.3