Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5821

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
6,638,189	+		Pf6N2E2_5820	0.37	+0.8
6,638,190	-		Pf6N2E2_5820	0.37	+0.3
6,638,190	-		Pf6N2E2_5820	0.37	-0.7
6,638,320	-		Pf6N2E2_5820	0.53	+0.3
6,638,516	+		Pf6N2E2_5820	0.78	+0.3
6,638,688	+				+0.3
6,638,688	+				+0.0
6,638,788	-				+0.3
6,638,875	+				+0.3
6,638,875	+				-0.7
6,638,875	+				-0.3
6,638,875	+				-0.7
6,638,875	+				+0.3
6,638,875	+				+0.3
6,638,876	-				-0.7
6,638,930	+		Pf6N2E2_5821	0.14	-1.0
6,639,091	+		Pf6N2E2_5821	0.31	-0.7
6,639,092	-		Pf6N2E2_5821	0.31	+0.3
6,639,092	-		Pf6N2E2_5821	0.31	+0.3
6,639,092	-		Pf6N2E2_5821	0.31	-0.7
6,639,099	+		Pf6N2E2_5821	0.31	+0.3
6,639,100	-		Pf6N2E2_5821	0.32	+0.3
6,639,100	-		Pf6N2E2_5821	0.32	+0.3
6,639,100	-		Pf6N2E2_5821	0.32	-0.7
6,639,406	+		Pf6N2E2_5821	0.63	-1.2
6,639,406	+		Pf6N2E2_5821	0.63	+0.3
6,639,406	+		Pf6N2E2_5821	0.63	+0.3
6,639,406	+		Pf6N2E2_5821	0.63	-0.6
6,639,406	+		Pf6N2E2_5821	0.63	-0.6
6,639,406	+		Pf6N2E2_5821	0.63	-0.6
6,639,406	+		Pf6N2E2_5821	0.63	+0.3
6,639,406	+		Pf6N2E2_5821	0.63	+0.3
6,639,406	+		Pf6N2E2_5821	0.63	+0.7
6,639,407	-		Pf6N2E2_5821	0.63	-0.7
6,639,407	-		Pf6N2E2_5821	0.63	-0.4
6,639,407	-		Pf6N2E2_5821	0.63	-1.0
6,639,407	-		Pf6N2E2_5821	0.63	-1.2
6,639,407	-		Pf6N2E2_5821	0.63	-0.7
6,639,573	-		Pf6N2E2_5821	0.81	-0.7
6,639,731	+				+0.3
6,639,732	-				-0.7
6,639,732	-				+0.3
6,639,732	-				-1.2
6,639,738	+				-0.7
6,639,738	+				+0.3
6,639,739	-				+0.3
6,639,739	-				+0.3
6,639,739	-				+0.3
6,639,739	-				-1.2
6,639,825	+				+0.3
6,639,842	+				-0.7
6,639,842	+				-0.7
6,639,842	+				-0.7
6,639,842	+				-0.7
6,639,842	+				+0.3
6,639,843	-				+0.3
6,639,843	-				-1.7
6,639,843	-				-0.7
6,639,843	-				+1.2
6,639,844	+				+0.3