Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5655

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
6,465,381	+		Pf6N2E2_5654	0.33	+0.3
6,465,411	+		Pf6N2E2_5654	0.36	+0.3
6,465,411	+		Pf6N2E2_5654	0.36	+0.3
6,465,412	-		Pf6N2E2_5654	0.36	+0.3
6,465,412	-		Pf6N2E2_5654	0.36	+0.3
6,465,438	+		Pf6N2E2_5654	0.39	-0.5
6,465,681	+		Pf6N2E2_5654	0.63	-0.4
6,465,681	+		Pf6N2E2_5654	0.63	-0.7
6,465,681	+		Pf6N2E2_5654	0.63	-1.8
6,465,681	+		Pf6N2E2_5654	0.63	+0.3
6,465,682	-		Pf6N2E2_5654	0.63	+0.3
6,465,682	-		Pf6N2E2_5654	0.63	+0.3
6,465,682	-		Pf6N2E2_5654	0.63	+0.3
6,465,789	+		Pf6N2E2_5654	0.74	+0.3
6,465,789	+		Pf6N2E2_5654	0.74	-0.7
6,465,789	+		Pf6N2E2_5654	0.74	+0.3
6,465,789	+		Pf6N2E2_5654	0.74	-0.1
6,465,789	+		Pf6N2E2_5654	0.74	-0.7
6,465,790	-		Pf6N2E2_5654	0.74	+0.3
6,465,790	-		Pf6N2E2_5654	0.74	-0.7
6,465,790	-		Pf6N2E2_5654	0.74	+0.3
6,465,790	-		Pf6N2E2_5654	0.74	-0.7
6,465,805	+		Pf6N2E2_5654	0.76	+0.3
6,465,806	-		Pf6N2E2_5654	0.76	-0.7
6,465,849	+		Pf6N2E2_5654	0.80	-2.9
6,465,849	+		Pf6N2E2_5654	0.80	-0.6
6,465,850	-		Pf6N2E2_5654	0.80	-0.7
6,465,850	-		Pf6N2E2_5654	0.80	+0.3
6,465,850	-		Pf6N2E2_5654	0.80	+0.3
6,465,850	-		Pf6N2E2_5654	0.80	-0.3
6,465,850	-		Pf6N2E2_5654	0.80	+0.3
6,465,850	-		Pf6N2E2_5654	0.80	+0.3
6,465,990	+				-0.2
6,465,991	-				+0.7
6,465,991	-				+0.3
6,465,991	-				-1.0
6,466,024	-				-0.5
6,466,072	+				+0.3
6,466,073	-				+0.3
6,466,075	+				-1.7
6,466,075	+				+0.3
6,466,076	-				-1.3
6,466,076	-				-0.6
6,466,076	-				+0.3
6,466,076	-				-1.7
6,466,076	-				-1.1
6,466,076	-				+0.3
6,466,076	-				+0.3
6,466,078	+				-0.7
6,466,131	+				+0.3
6,466,173	+				+0.3
6,466,173	+				-2.3
6,466,174	-				+0.3
6,466,482	+		Pf6N2E2_5655	0.40	-0.4
6,466,482	+		Pf6N2E2_5655	0.40	+0.3
6,466,509	+		Pf6N2E2_5655	0.46	+0.3
6,466,510	-		Pf6N2E2_5655	0.46	-1.7
6,466,523	+		Pf6N2E2_5655	0.49	-0.7
6,466,524	-		Pf6N2E2_5655	0.49	-1.3
6,466,524	-		Pf6N2E2_5655	0.49	+0.3
6,466,524	-		Pf6N2E2_5655	0.49	+0.3
6,466,524	-		Pf6N2E2_5655	0.49	-0.3
6,466,524	-		Pf6N2E2_5655	0.49	-0.9
6,466,562	+		Pf6N2E2_5655	0.58	+0.3
6,466,562	+		Pf6N2E2_5655	0.58	-2.5
6,466,562	+		Pf6N2E2_5655	0.58	-0.7
6,466,562	+		Pf6N2E2_5655	0.58	-0.7
6,466,563	-		Pf6N2E2_5655	0.58	+0.3
6,466,563	-		Pf6N2E2_5655	0.58	-1.7
6,466,569	-		Pf6N2E2_5655	0.59	-0.7
6,466,583	+		Pf6N2E2_5655	0.62	+0.3
6,466,583	+		Pf6N2E2_5655	0.62	-1.3
6,466,583	+		Pf6N2E2_5655	0.62	-1.0
6,466,584	-		Pf6N2E2_5655	0.62	+0.3
6,466,584	-		Pf6N2E2_5655	0.62	-0.8
6,466,584	-		Pf6N2E2_5655	0.62	-0.7
6,466,584	-		Pf6N2E2_5655	0.62	-0.9
6,466,584	-		Pf6N2E2_5655	0.62	+0.3
6,466,584	-		Pf6N2E2_5655	0.62	-1.7
6,466,799	+				+0.1
6,466,799	+				+0.3
6,466,799	+				+0.3
6,466,800	-				-0.7
6,466,800	-				-0.7
6,466,800	-				+0.3
6,466,800	-				-0.9
6,466,800	-				-0.5
6,466,828	+				-1.3
6,466,828	+				-0.7
6,466,828	+				-0.7
6,466,828	+				+0.3
6,466,828	+				+0.3
6,466,828	+				+0.3
6,466,828	+				+0.3
6,466,829	-				+0.3
6,466,830	+				+0.7
6,466,830	+				+0.3
6,466,831	-				+0.3
6,466,831	-				-0.7
6,466,831	-				-1.3
6,466,831	-				-1.3
6,466,831	-				-0.7
6,466,861	+				-1.7
6,466,871	+				+0.3
6,466,871	+				-0.4
6,466,872	-				-1.4
6,466,872	-				-0.8
6,466,903	+				+0.3
6,466,903	+				-1.3
6,466,903	+				+0.3
6,466,903	+				+2.7
6,466,904	-				+0.3
6,466,912	+				+0.3
6,466,912	+				+0.1
6,466,912	+				-0.7
6,466,913	-				-0.6
6,466,913	-				+0.3
6,466,913	-				+0.3
6,466,913	-				+0.3
6,466,913	-				-1.1
6,466,913	-				+0.3
6,466,931	+				+0.3
6,466,939	+				+0.3
6,466,978	+				-0.9
6,466,978	+				+0.3
6,466,978	+				-1.3
6,466,978	+				+0.3
6,466,978	+				+0.3
6,466,979	-				+0.3
6,466,979	-				-0.7
6,466,979	-				+0.3
6,466,996	+				-1.4
6,466,996	+				-0.7
6,466,996	+				+0.3
6,466,997	-				-0.7
6,466,997	-				-0.7
6,466,999	+				+0.3
6,466,999	+				+0.3
6,467,000	-				+0.3
6,467,000	-				-0.7
6,467,000	-				+0.3
6,467,000	-				-1.4
6,467,000	-				+0.3
6,467,016	-				-0.7
6,467,029	+				+0.3
6,467,029	+				+0.3
6,467,034	+				+0.3
6,467,034	+				-0.3
6,467,034	+				+0.3
6,467,034	+				-0.7
6,467,034	+				-1.7
6,467,034	+				+0.3
6,467,034	+				-0.8
6,467,035	-				-0.7
6,467,035	-				+0.3
6,467,035	-				-1.3
6,467,035	-				-0.7
6,467,035	-				-1.3
6,467,035	-				-0.7
6,467,035	-				+0.3
6,467,035	-				-0.7
6,467,096	-				-1.4
6,467,169	-				-1.3
6,467,173	+				+0.3