Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5492

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
6,309,846	+				+0.3
6,309,846	+				+0.3
6,309,846	+				+0.3
6,309,846	+				-0.7
6,309,846	+				-0.7
6,309,847	-				-0.0
6,309,847	-				-0.8
6,309,847	-				-0.2
6,309,847	-				+0.3
6,309,847	-				+0.3
6,310,050	+		Pf6N2E2_5491	0.28	-0.4
6,310,050	+		Pf6N2E2_5491	0.28	+0.3
6,310,050	+		Pf6N2E2_5491	0.28	-1.2
6,310,050	+		Pf6N2E2_5491	0.28	+0.0
6,310,050	+		Pf6N2E2_5491	0.28	-0.7
6,310,050	+		Pf6N2E2_5491	0.28	+0.3
6,310,050	+		Pf6N2E2_5491	0.28	-0.3
6,310,051	-		Pf6N2E2_5491	0.28	-0.7
6,310,051	-		Pf6N2E2_5491	0.28	-0.7
6,310,051	-		Pf6N2E2_5491	0.28	+0.3
6,310,054	+		Pf6N2E2_5491	0.29	-0.7
6,310,054	+		Pf6N2E2_5491	0.29	-0.7
6,310,055	-		Pf6N2E2_5491	0.29	+0.3
6,310,055	-		Pf6N2E2_5491	0.29	-1.0
6,310,055	-		Pf6N2E2_5491	0.29	+0.3
6,310,139	+		Pf6N2E2_5491	0.36	+0.3
6,310,140	-		Pf6N2E2_5491	0.36	-0.7
6,310,142	+		Pf6N2E2_5491	0.36	+0.6
6,310,142	+		Pf6N2E2_5491	0.36	+0.3
6,310,142	+		Pf6N2E2_5491	0.36	-0.9
6,310,143	-		Pf6N2E2_5491	0.37	-0.7
6,310,143	-		Pf6N2E2_5491	0.37	-0.7
6,310,158	+		Pf6N2E2_5491	0.38	+0.3
6,310,159	-		Pf6N2E2_5491	0.38	-1.7
6,310,249	-		Pf6N2E2_5491	0.46	+0.3
6,310,249	-		Pf6N2E2_5491	0.46	-0.7
6,310,249	-		Pf6N2E2_5491	0.46	-0.5
6,310,258	+		Pf6N2E2_5491	0.47	-1.2
6,310,258	+		Pf6N2E2_5491	0.47	+0.3
6,310,258	+		Pf6N2E2_5491	0.47	-0.1
6,310,259	-		Pf6N2E2_5491	0.47	+0.3
6,310,259	-		Pf6N2E2_5491	0.47	+0.3
6,310,259	-		Pf6N2E2_5491	0.47	+0.3
6,310,567	+		Pf6N2E2_5491	0.75	-0.8
6,310,567	+		Pf6N2E2_5491	0.75	-1.2
6,310,567	+		Pf6N2E2_5491	0.75	-0.9
6,310,567	+		Pf6N2E2_5491	0.75	-1.2
6,310,568	-		Pf6N2E2_5491	0.75	-1.9
6,310,568	-		Pf6N2E2_5491	0.75	-0.7
6,310,568	-		Pf6N2E2_5491	0.75	-0.7
6,310,568	-		Pf6N2E2_5491	0.75	-0.7
6,310,578	+		Pf6N2E2_5491	0.76	-1.1
6,310,888	-				+0.3
6,310,930	+				+0.3
6,310,930	+				+0.3
6,311,389	+		Pf6N2E2_5492	0.59	-1.3
6,311,389	+		Pf6N2E2_5492	0.59	-1.4
6,311,389	+		Pf6N2E2_5492	0.59	-1.5
6,311,390	-		Pf6N2E2_5492	0.59	-0.7
6,311,390	-		Pf6N2E2_5492	0.59	+0.3
6,311,509	-		Pf6N2E2_5492	0.72	-0.7
6,311,666	+		Pf6N2E2_5492	0.89	+0.3
6,311,666	+		Pf6N2E2_5492	0.89	+0.3
6,311,666	+		Pf6N2E2_5492	0.89	-2.6
6,311,666	+		Pf6N2E2_5492	0.89	+0.3
6,311,667	-		Pf6N2E2_5492	0.89	-1.4
6,311,713	+				+0.3
6,311,713	+				+0.3
6,311,714	-				+0.3
6,311,714	-				-0.7
6,311,894	+		Pf6N2E2_5493	0.12	-1.3
6,311,894	+		Pf6N2E2_5493	0.12	-0.7
6,311,894	+		Pf6N2E2_5493	0.12	+0.3
6,311,894	+		Pf6N2E2_5493	0.12	+0.3
6,311,894	+		Pf6N2E2_5493	0.12	+0.3
6,311,894	+		Pf6N2E2_5493	0.12	-1.7
6,311,894	+		Pf6N2E2_5493	0.12	-0.7
6,311,894	+		Pf6N2E2_5493	0.12	+1.3
6,311,894	+		Pf6N2E2_5493	0.12	-0.7
6,311,895	-		Pf6N2E2_5493	0.13	-0.7
6,311,895	-		Pf6N2E2_5493	0.13	+0.3
6,311,895	-		Pf6N2E2_5493	0.13	+0.3
6,311,895	-		Pf6N2E2_5493	0.13	+0.3
6,311,895	-		Pf6N2E2_5493	0.13	+0.3
6,311,895	-		Pf6N2E2_5493	0.13	-0.7
6,312,152	+		Pf6N2E2_5493	0.47	-0.7
6,312,152	+		Pf6N2E2_5493	0.47	-0.7
6,312,152	+		Pf6N2E2_5493	0.47	-0.7
6,312,152	+		Pf6N2E2_5493	0.47	-1.7
6,312,153	-		Pf6N2E2_5493	0.47	+0.3
6,312,153	-		Pf6N2E2_5493	0.47	-0.7
6,312,412	+		Pf6N2E2_5493	0.81	+0.3
6,312,413	-		Pf6N2E2_5493	0.82	-2.0
6,312,413	-		Pf6N2E2_5493	0.82	-0.7
6,312,535	+				-0.5
6,312,548	+				-1.3
6,312,548	+				-0.7
6,312,548	+				-1.3
6,312,549	-				-2.0
6,312,549	-				-0.7
6,312,576	+				-0.3
6,312,576	+				+0.3
6,312,576	+				+0.3
6,312,576	+				-0.4
6,312,713	+				+0.3
6,312,713	+				+0.3
6,312,714	-				+0.3