Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4503

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
5,234,255	+				+0.5
5,234,256	-				-1.1
5,234,296	+				-1.1
5,234,296	+				+0.5
5,234,297	-				+0.5
5,234,303	+				-1.9
5,234,303	+				-0.1
5,234,303	+				+0.5
5,234,304	-				-1.1
5,234,304	-				-0.5
5,234,304	-				+0.1
5,234,369	-				-0.5
5,234,382	+				+0.5
5,234,396	+				-1.1
5,234,397	-				-0.8
5,234,397	-				+0.5
5,234,434	+				-0.5
5,234,434	+				+0.5
5,234,434	+				-0.5
5,234,434	+				-0.8
5,234,434	+				+0.5
5,234,441	+				+0.5
5,234,441	+				-1.1
5,234,557	+		Pf6N2E2_4502	0.18	-0.5
5,234,557	+		Pf6N2E2_4502	0.18	-1.9
5,234,557	+		Pf6N2E2_4502	0.18	-0.3
5,234,557	+		Pf6N2E2_4502	0.18	+0.0
5,234,557	+		Pf6N2E2_4502	0.18	-1.5
5,234,558	-		Pf6N2E2_4502	0.18	-1.4
5,234,558	-		Pf6N2E2_4502	0.18	+0.5
5,234,558	-		Pf6N2E2_4502	0.18	-1.1
5,234,677	+		Pf6N2E2_4502	0.38	-0.5
5,234,678	-		Pf6N2E2_4502	0.39	-0.5
5,234,678	-		Pf6N2E2_4502	0.39	-0.5
5,234,711	+		Pf6N2E2_4502	0.44	-0.5
5,234,746	-		Pf6N2E2_4502	0.50	+0.5
5,234,787	+		Pf6N2E2_4502	0.57	-0.5
5,234,803	+		Pf6N2E2_4502	0.60	-1.1
5,234,804	-		Pf6N2E2_4502	0.60	-0.5
5,235,002	+				+0.5
5,235,069	+				+0.0
5,235,069	+				-0.8
5,235,069	+				-1.1
5,235,069	+				+0.5
5,235,070	-				-0.7
5,235,070	-				-0.8
5,235,199	+				-0.8
5,235,199	+				-1.1
5,235,200	-				+0.5
5,235,200	-				+0.5
5,235,200	-				+0.5
5,235,437	+		Pf6N2E2_4503	0.32	+0.5
5,235,437	+		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	+0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.9
5,235,438	-		Pf6N2E2_4503	0.32	-1.1
5,235,438	-		Pf6N2E2_4503	0.32	+0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,438	-		Pf6N2E2_4503	0.32	-0.5
5,235,446	+		Pf6N2E2_4503	0.33	+0.5
5,235,446	+		Pf6N2E2_4503	0.33	-1.1
5,235,447	-		Pf6N2E2_4503	0.33	+0.5
5,235,447	-		Pf6N2E2_4503	0.33	-0.5
5,235,447	-		Pf6N2E2_4503	0.33	-1.1
5,235,564	-		Pf6N2E2_4503	0.45	-1.5
5,235,564	-		Pf6N2E2_4503	0.45	-0.5
5,235,602	+		Pf6N2E2_4503	0.49	-0.5
5,235,773	+		Pf6N2E2_4503	0.66	+0.9
5,235,774	-		Pf6N2E2_4503	0.67	-1.1
5,235,792	-		Pf6N2E2_4503	0.68	+0.5
5,235,891	+		Pf6N2E2_4503	0.79	-0.5
5,236,013	+				-0.5
5,236,013	+				+0.5
5,236,013	+				+0.5
5,236,013	+				+0.5
5,236,013	+				+0.5
5,236,014	-				-0.5
5,236,014	-				+0.5
5,236,014	-				+0.5
5,236,014	-				-1.0
5,236,094	+				-1.5
5,236,094	+				-0.5
5,236,094	+				-0.5
5,236,094	+				-0.5
5,236,095	-				-1.1
5,236,132	+				+0.5
5,236,169	+				+0.2
5,236,169	+				+0.5
5,236,169	+				-1.1
5,236,532	-		Pf6N2E2_4504	0.36	-0.1
5,236,568	+		Pf6N2E2_4504	0.39	-1.5
5,236,569	-		Pf6N2E2_4504	0.39	-0.6
5,236,591	+		Pf6N2E2_4504	0.41	-1.5
5,236,785	+		Pf6N2E2_4504	0.58	-1.3
5,237,075	+		Pf6N2E2_4504	0.83	-2.1
5,237,076	-		Pf6N2E2_4504	0.83	-0.5