Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4244

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
4,936,020	+		Pf6N2E2_4243	0.63	+0.5
4,936,021	-		Pf6N2E2_4243	0.64	+0.5
4,936,086	+		Pf6N2E2_4243	0.71	-0.7
4,936,087	-		Pf6N2E2_4243	0.72	-0.5
4,936,087	-		Pf6N2E2_4243	0.72	-2.1
4,936,107	+		Pf6N2E2_4243	0.74	-1.1
4,936,107	+		Pf6N2E2_4243	0.74	-1.5
4,936,469	+				-1.1
4,936,556	-				-0.5
4,936,593	+				-0.1
4,936,593	+				-0.5
4,936,593	+				+0.0
4,936,593	+				-0.2
4,936,594	-				-1.3
4,936,594	-				+0.5
4,936,597	+				-1.5
4,936,597	+				-0.5
4,936,597	+				-0.5
4,936,597	+				+0.5
4,936,597	+				+0.5
4,936,597	+				+0.5
4,936,598	-				+0.5
4,936,598	-				-2.3
4,936,598	-				-2.3
4,936,598	-				-3.1
4,936,598	-				-3.4
4,936,598	-				+0.5
4,936,598	-				-1.1
4,936,598	-				-0.5
4,936,598	-				-0.5
4,936,599	+				+0.5
4,936,600	-				-1.5
4,936,608	+				+0.5
4,936,608	+				-1.1
4,936,649	+				-0.5
4,936,650	-				-3.7
4,936,650	-				-1.1
4,936,650	-				+0.5
4,936,712	+				+0.5
4,936,853	+				-0.5
4,936,863	+				-0.5
4,936,863	+				+0.5
4,936,864	-				-8.3
4,936,864	-				-6.7
4,936,904	+				-0.5
4,936,904	+				-1.1
4,936,904	+				-1.0
4,936,904	+				-1.1
4,936,904	+				-1.1
4,936,910	+				-0.9
4,936,910	+				-1.5
4,936,910	+				+0.5
4,936,910	+				+0.5
4,936,910	+				+0.5
4,936,910	+				-0.5
4,936,910	+				-0.5
4,936,910	+				-1.5
4,936,910	+				-0.8
4,936,911	-				+0.5
4,936,911	-				-1.1
4,936,911	-				-6.2
4,936,911	-				-3.2
4,936,913	+				+0.5
4,936,913	+				-0.9
4,936,913	+				+0.5
4,936,913	+				+0.5
4,936,913	+				-1.1
4,936,914	-				-3.0
4,936,914	-				+0.5
4,936,914	-				+0.5
4,937,194	+		Pf6N2E2_4244	0.22	+0.5
4,937,194	+		Pf6N2E2_4244	0.22	-1.5
4,937,194	+		Pf6N2E2_4244	0.22	-0.5
4,937,195	-		Pf6N2E2_4244	0.22	+0.5
4,937,195	-		Pf6N2E2_4244	0.22	-0.5
4,937,195	-		Pf6N2E2_4244	0.22	+0.5
4,937,195	-		Pf6N2E2_4244	0.22	-1.9
4,937,516	+		Pf6N2E2_4244	0.41	-0.5
4,937,810	+		Pf6N2E2_4244	0.59	-1.1
4,937,810	+		Pf6N2E2_4244	0.59	-1.1
4,937,810	+		Pf6N2E2_4244	0.59	-1.5
4,937,810	+		Pf6N2E2_4244	0.59	+0.5
4,937,811	-		Pf6N2E2_4244	0.59	-1.1
4,937,811	-		Pf6N2E2_4244	0.59	+0.5
4,937,811	-		Pf6N2E2_4244	0.59	-1.1
4,937,811	-		Pf6N2E2_4244	0.59	-0.9
4,937,811	-		Pf6N2E2_4244	0.59	+0.5
4,937,811	-		Pf6N2E2_4244	0.59	-0.5
4,937,811	-		Pf6N2E2_4244	0.59	-2.0
4,937,811	-		Pf6N2E2_4244	0.59	-1.3
4,937,811	-		Pf6N2E2_4244	0.59	-1.1
4,937,811	-		Pf6N2E2_4244	0.59	+0.5
4,937,811	-		Pf6N2E2_4244	0.59	-1.1
4,937,942	+		Pf6N2E2_4244	0.67	-0.5
4,937,942	+		Pf6N2E2_4244	0.67	-0.5
4,937,942	+		Pf6N2E2_4244	0.67	-0.5
4,937,942	+		Pf6N2E2_4244	0.67	-1.9
4,937,943	-		Pf6N2E2_4244	0.67	-1.6
4,937,943	-		Pf6N2E2_4244	0.67	-0.5
4,937,943	-		Pf6N2E2_4244	0.67	+0.5
4,937,945	+		Pf6N2E2_4244	0.67	-0.9
4,937,945	+		Pf6N2E2_4244	0.67	-1.9
4,937,945	+		Pf6N2E2_4244	0.67	-0.5
4,937,945	+		Pf6N2E2_4244	0.67	+0.5
4,937,945	+		Pf6N2E2_4244	0.67	+0.5
4,937,945	+		Pf6N2E2_4244	0.67	-0.5
4,937,946	-		Pf6N2E2_4244	0.67	+0.5
4,937,946	-		Pf6N2E2_4244	0.67	+0.5
4,937,946	-		Pf6N2E2_4244	0.67	-0.1
4,937,946	-		Pf6N2E2_4244	0.67	-2.8
4,937,946	-		Pf6N2E2_4244	0.67	+0.5
4,937,946	-		Pf6N2E2_4244	0.67	-2.9
4,937,946	-		Pf6N2E2_4244	0.67	+0.5
4,938,044	+		Pf6N2E2_4244	0.73	-2.0
4,938,045	-		Pf6N2E2_4244	0.73	-0.5
4,938,045	-		Pf6N2E2_4244	0.73	-0.5
4,938,062	+		Pf6N2E2_4244	0.74	-1.1
4,938,062	+		Pf6N2E2_4244	0.74	+0.5
4,938,063	-		Pf6N2E2_4244	0.75	+0.5
4,938,063	-		Pf6N2E2_4244	0.75	+0.5
4,938,063	-		Pf6N2E2_4244	0.75	-1.5
4,938,165	-		Pf6N2E2_4244	0.81	-1.4
4,938,216	+		Pf6N2E2_4244	0.84	+0.5
4,938,216	+		Pf6N2E2_4244	0.84	+0.5
4,938,216	+		Pf6N2E2_4244	0.84	-2.4
4,938,217	-		Pf6N2E2_4244	0.84	-1.1
4,938,217	-		Pf6N2E2_4244	0.84	-0.5
4,938,217	-		Pf6N2E2_4244	0.84	+0.5
4,938,217	-		Pf6N2E2_4244	0.84	-0.3
4,938,242	+		Pf6N2E2_4244	0.85	-0.5
4,938,290	+		Pf6N2E2_4244	0.88	-2.3
4,938,302	+		Pf6N2E2_4244	0.89	+0.5
4,938,302	+		Pf6N2E2_4244	0.89	+0.5
4,938,303	-		Pf6N2E2_4244	0.89	-0.5
4,938,303	-		Pf6N2E2_4244	0.89	-1.1
4,938,303	-		Pf6N2E2_4244	0.89	+0.5
4,938,303	-		Pf6N2E2_4244	0.89	+0.5
4,938,303	-		Pf6N2E2_4244	0.89	+0.5
4,938,333	-				-0.5
4,938,374	+				+0.5
4,938,466	+				+0.5
4,938,541	+				-0.5
4,938,541	+				+0.5
4,938,542	-				+0.5
4,938,547	+				-0.5
4,938,547	+				-0.5
4,938,547	+				-1.1
4,938,547	+				+0.5
4,938,547	+				-1.3
4,938,547	+				+0.5
4,938,547	+				-1.5
4,938,547	+				-0.5
4,938,547	+				-0.5
4,938,547	+				-1.4
4,938,547	+				-0.5
4,938,547	+				-0.5
4,938,548	-				+0.5
4,938,641	-		Pf6N2E2_4245	0.13	+0.5
4,938,674	+		Pf6N2E2_4245	0.15	-0.5
4,938,675	-		Pf6N2E2_4245	0.15	-1.0
4,938,675	-		Pf6N2E2_4245	0.15	-0.5
4,938,702	+		Pf6N2E2_4245	0.18	+0.5
4,938,703	-		Pf6N2E2_4245	0.18	-0.5
4,938,716	-		Pf6N2E2_4245	0.19	-0.5
4,939,030	+		Pf6N2E2_4245	0.43	-1.5
4,939,031	-		Pf6N2E2_4245	0.43	-1.1
4,939,031	-		Pf6N2E2_4245	0.43	-1.1
4,939,117	+		Pf6N2E2_4245	0.50	-1.1
4,939,117	+		Pf6N2E2_4245	0.50	+0.5
4,939,117	+		Pf6N2E2_4245	0.50	-1.8
4,939,117	+		Pf6N2E2_4245	0.50	-0.5
4,939,117	+		Pf6N2E2_4245	0.50	-1.1
4,939,117	+		Pf6N2E2_4245	0.50	+0.5
4,939,117	+		Pf6N2E2_4245	0.50	-0.5
4,939,118	-		Pf6N2E2_4245	0.50	+0.5
4,939,118	-		Pf6N2E2_4245	0.50	-1.5
4,939,118	-		Pf6N2E2_4245	0.50	-0.5
4,939,118	-		Pf6N2E2_4245	0.50	-1.0
4,939,118	-		Pf6N2E2_4245	0.50	-0.1
4,939,118	-		Pf6N2E2_4245	0.50	+0.5
4,939,119	+		Pf6N2E2_4245	0.50	-1.4
4,939,119	+		Pf6N2E2_4245	0.50	-0.5
4,939,119	+		Pf6N2E2_4245	0.50	-1.4
4,939,119	+		Pf6N2E2_4245	0.50	-1.1
4,939,120	-		Pf6N2E2_4245	0.50	+0.5
4,939,120	-		Pf6N2E2_4245	0.50	+0.5
4,939,138	+		Pf6N2E2_4245	0.51	+0.5
4,939,138	+		Pf6N2E2_4245	0.51	+0.5
4,939,214	+		Pf6N2E2_4245	0.57	+0.5
4,939,214	+		Pf6N2E2_4245	0.57	+0.5
4,939,214	+		Pf6N2E2_4245	0.57	-1.1
4,939,276	+		Pf6N2E2_4245	0.62	-0.5
4,939,277	-		Pf6N2E2_4245	0.62	-0.5
4,939,277	-		Pf6N2E2_4245	0.62	+0.5
4,939,277	-		Pf6N2E2_4245	0.62	-1.1
4,939,277	-		Pf6N2E2_4245	0.62	-2.1
4,939,321	+		Pf6N2E2_4245	0.65	-1.5
4,939,322	-		Pf6N2E2_4245	0.66	+0.5
4,939,322	-		Pf6N2E2_4245	0.66	-0.5
4,939,339	+		Pf6N2E2_4245	0.67	+0.5
4,939,340	-		Pf6N2E2_4245	0.67	-0.9
4,939,366	+		Pf6N2E2_4245	0.69	-1.9
4,939,367	-		Pf6N2E2_4245	0.69	-0.8
4,939,367	-		Pf6N2E2_4245	0.69	+0.5
4,939,367	-		Pf6N2E2_4245	0.69	-1.5
4,939,384	+		Pf6N2E2_4245	0.70	-1.1
4,939,471	+		Pf6N2E2_4245	0.77	-0.5
4,939,471	+		Pf6N2E2_4245	0.77	-0.5
4,939,471	+		Pf6N2E2_4245	0.77	+0.5