Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3464

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
4,044,754	-		Pf6N2E2_3463	0.46	-4.4
4,044,754	-		Pf6N2E2_3463	0.46	-1.2
4,044,754	-		Pf6N2E2_3463	0.46	-3.1
4,044,900	+		Pf6N2E2_3463	0.56	-4.4
4,044,900	+		Pf6N2E2_3463	0.56	-1.2
4,044,900	+		Pf6N2E2_3463	0.56	+0.4
4,045,021	-		Pf6N2E2_3463	0.65	+0.4
4,045,021	-		Pf6N2E2_3463	0.65	+0.4
4,045,077	+		Pf6N2E2_3463	0.69	+0.4
4,045,225	-		Pf6N2E2_3463	0.80	-1.9
4,045,317	+		Pf6N2E2_3463	0.87	-1.6
4,045,317	+		Pf6N2E2_3463	0.87	-0.6
4,045,317	+		Pf6N2E2_3463	0.87	+0.4
4,045,318	-		Pf6N2E2_3463	0.87	+0.4
4,045,407	+				+0.4
4,045,407	+				-1.2
4,045,408	-				-0.6
4,045,498	+				+0.4
4,045,499	-				-2.0
4,045,499	-				-1.2
4,045,531	+				-2.8
4,045,531	+				+0.4
4,045,532	-				+0.4
4,045,532	-				+0.4
4,045,532	-				-0.6
4,045,532	-				-1.4
4,045,532	-				+0.4
4,045,573	-				-0.6
4,045,599	+				+0.4
4,045,648	-				-1.2
4,045,648	-				+0.4
4,045,834	+		Pf6N2E2_3464	0.25	-3.6
4,045,834	+		Pf6N2E2_3464	0.25	-0.6
4,045,834	+		Pf6N2E2_3464	0.25	-0.6
4,045,834	+		Pf6N2E2_3464	0.25	-1.2
4,045,853	+		Pf6N2E2_3464	0.27	-0.6
4,045,853	+		Pf6N2E2_3464	0.27	-5.1
4,045,854	-		Pf6N2E2_3464	0.28	+0.4
4,045,854	-		Pf6N2E2_3464	0.28	-0.6
4,046,084	+		Pf6N2E2_3464	0.53	+0.4
4,046,084	+		Pf6N2E2_3464	0.53	+0.4
4,046,084	+		Pf6N2E2_3464	0.53	+0.4
4,046,084	+		Pf6N2E2_3464	0.53	-0.6
4,046,084	+		Pf6N2E2_3464	0.53	+0.4
4,046,084	+		Pf6N2E2_3464	0.53	-2.6
4,046,119	+		Pf6N2E2_3464	0.56	+0.4
4,046,131	+		Pf6N2E2_3464	0.58	-3.1
4,046,131	+		Pf6N2E2_3464	0.58	-0.6
4,046,132	-		Pf6N2E2_3464	0.58	-0.6
4,046,152	+		Pf6N2E2_3464	0.60	-1.2
4,046,152	+		Pf6N2E2_3464	0.60	-0.6
4,046,153	-		Pf6N2E2_3464	0.60	-3.0
4,046,153	-		Pf6N2E2_3464	0.60	+0.4
4,046,153	-		Pf6N2E2_3464	0.60	+0.4
4,046,179	+		Pf6N2E2_3464	0.63	-3.0
4,046,179	+		Pf6N2E2_3464	0.63	-0.6
4,046,179	+		Pf6N2E2_3464	0.63	-0.6
4,046,179	+		Pf6N2E2_3464	0.63	+0.4
4,046,179	+		Pf6N2E2_3464	0.63	-0.6
4,046,180	-		Pf6N2E2_3464	0.63	-0.6
4,046,262	-		Pf6N2E2_3464	0.72	+0.4
4,046,262	-		Pf6N2E2_3464	0.72	-0.6
4,046,344	+		Pf6N2E2_3464	0.81	-0.6
4,046,344	+		Pf6N2E2_3464	0.81	-2.8
4,046,344	+		Pf6N2E2_3464	0.81	-1.6
4,046,344	+		Pf6N2E2_3464	0.81	+0.4
4,046,345	-		Pf6N2E2_3464	0.81	+0.4
4,046,345	-		Pf6N2E2_3464	0.81	-0.6
4,046,345	-		Pf6N2E2_3464	0.81	+0.4
4,046,353	+		Pf6N2E2_3464	0.82	-3.1
4,046,353	+		Pf6N2E2_3464	0.82	-0.6
4,046,368	+		Pf6N2E2_3464	0.83	+0.4
4,046,368	+		Pf6N2E2_3464	0.83	-1.2
4,046,368	+		Pf6N2E2_3464	0.83	+0.4
4,046,428	+		Pf6N2E2_3464	0.90	-2.2
4,046,428	+		Pf6N2E2_3464	0.90	-4.5
4,046,429	-				-2.8
4,046,429	-				+0.4
4,046,575	+				+0.4
4,046,576	-				+0.4
4,046,637	+				+0.4
4,046,637	+				+0.4
4,046,637	+				-0.6
4,046,637	+				-0.2
4,046,638	-				-0.9
4,046,889	+		Pf6N2E2_3465	0.26	+0.4
4,046,889	+		Pf6N2E2_3465	0.26	+0.4
4,046,890	-		Pf6N2E2_3465	0.26	-0.0
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,892	+		Pf6N2E2_3465	0.27	-0.6
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,892	+		Pf6N2E2_3465	0.27	+0.4
4,046,893	-		Pf6N2E2_3465	0.27	-1.8
4,046,893	-		Pf6N2E2_3465	0.27	+0.4
4,046,893	-		Pf6N2E2_3465	0.27	+0.4
4,046,893	-		Pf6N2E2_3465	0.27	-0.5
4,046,893	-		Pf6N2E2_3465	0.27	+0.4
4,046,893	-		Pf6N2E2_3465	0.27	-1.2
4,046,916	+		Pf6N2E2_3465	0.30	+0.4
4,046,916	+		Pf6N2E2_3465	0.30	+0.4
4,046,917	-		Pf6N2E2_3465	0.31	-0.5
4,046,917	-		Pf6N2E2_3465	0.31	-0.6
4,046,917	-		Pf6N2E2_3465	0.31	-2.3
4,046,917	-		Pf6N2E2_3465	0.31	-0.9
4,046,957	+		Pf6N2E2_3465	0.37	+0.4
4,046,957	+		Pf6N2E2_3465	0.37	-0.6
4,046,958	-		Pf6N2E2_3465	0.37	-1.0
4,046,958	-		Pf6N2E2_3465	0.37	+0.4
4,046,958	-		Pf6N2E2_3465	0.37	-0.9
4,046,958	-		Pf6N2E2_3465	0.37	-0.6
4,047,009	+		Pf6N2E2_3465	0.45	-0.2
4,047,010	-		Pf6N2E2_3465	0.45	-0.6
4,047,012	-		Pf6N2E2_3465	0.45	-0.6
4,047,105	+		Pf6N2E2_3465	0.59	-0.6
4,047,105	+		Pf6N2E2_3465	0.59	+0.4
4,047,120	+		Pf6N2E2_3465	0.62	-0.1
4,047,121	-		Pf6N2E2_3465	0.62	+0.0
4,047,237	+		Pf6N2E2_3465	0.80	-0.6
4,047,366	+				-0.8
4,047,366	+				+0.4
4,047,366	+				+0.4
4,047,367	-				-1.2
4,047,367	-				-0.9