Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3402

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
3,945,492	-		Pf6N2E2_3400	0.85	-0.7
3,945,492	-		Pf6N2E2_3400	0.85	-1.1
3,945,492	-		Pf6N2E2_3400	0.85	+0.4
3,945,495	+		Pf6N2E2_3400	0.85	+0.4
3,945,528	-		Pf6N2E2_3400	0.89	+0.4
3,945,561	-				-0.6
3,945,578	+				+0.4
3,945,580	+				-1.2
3,945,580	+				+0.4
3,945,581	-				-0.5
3,945,581	-				-0.9
3,945,624	+				+0.4
3,945,625	-				+0.7
3,945,625	-				-0.6
3,945,625	-				+0.4
3,945,632	+				+0.4
3,945,632	+				-1.4
3,945,632	+				+0.4
3,945,632	+				-0.6
3,945,633	-				+0.4
3,945,633	-				+0.4
3,945,633	-				+0.4
3,945,633	-				+0.4
3,945,633	-				-0.6
3,945,710	+				+0.4
3,945,733	+				+0.4
3,945,751	-				-0.8
3,945,751	-				+0.4
3,945,751	-				+0.4
3,945,751	-				-0.6
3,945,751	-				+0.4
3,945,784	-				-0.6
3,945,852	-				-2.2
3,945,994	-				-0.6
3,946,056	+		Pf6N2E2_3401	0.27	+0.4
3,946,056	+		Pf6N2E2_3401	0.27	+1.4
3,946,056	+		Pf6N2E2_3401	0.27	-0.6
3,946,183	+		Pf6N2E2_3401	0.61	-0.2
3,946,183	+		Pf6N2E2_3401	0.61	-0.6
3,946,183	+		Pf6N2E2_3401	0.61	-0.6
3,946,183	+		Pf6N2E2_3401	0.61	-0.7
3,946,183	+		Pf6N2E2_3401	0.61	-0.6
3,946,184	-		Pf6N2E2_3401	0.61	+0.4
3,946,184	-		Pf6N2E2_3401	0.61	-0.6
3,946,184	-		Pf6N2E2_3401	0.61	+0.4
3,946,184	-		Pf6N2E2_3401	0.61	-2.1
3,946,184	-		Pf6N2E2_3401	0.61	-1.3
3,946,256	+		Pf6N2E2_3401	0.81	-0.6
3,946,256	+		Pf6N2E2_3401	0.81	+0.4
3,946,256	+		Pf6N2E2_3401	0.81	-1.6
3,946,256	+		Pf6N2E2_3401	0.81	-0.6
3,946,256	+		Pf6N2E2_3401	0.81	+0.4
3,946,257	-		Pf6N2E2_3401	0.81	+0.4
3,946,257	-		Pf6N2E2_3401	0.81	-1.0
3,946,257	-		Pf6N2E2_3401	0.81	-0.6
3,946,257	-		Pf6N2E2_3401	0.81	+0.4
3,946,333	+				-1.2
3,946,334	-				+0.4
3,946,354	+				+0.4
3,946,355	-				+0.4
3,946,398	-				+0.4
3,946,444	+				+0.4
3,946,444	+				+0.4
3,946,445	-				-0.5
3,946,445	-				+0.4
3,946,674	-		Pf6N2E2_3402	0.26	-1.4
3,946,674	-		Pf6N2E2_3402	0.26	+0.4
3,946,733	+		Pf6N2E2_3402	0.31	-0.6
3,946,733	+		Pf6N2E2_3402	0.31	+0.4
3,946,733	+		Pf6N2E2_3402	0.31	-0.8
3,946,734	-		Pf6N2E2_3402	0.31	-1.6
3,946,734	-		Pf6N2E2_3402	0.31	-0.6
3,946,734	-		Pf6N2E2_3402	0.31	-0.8
3,946,734	-		Pf6N2E2_3402	0.31	-1.9
3,946,742	-		Pf6N2E2_3402	0.32	-0.6
3,946,785	+		Pf6N2E2_3402	0.35	+0.4
3,946,786	-		Pf6N2E2_3402	0.35	+0.4
3,946,786	-		Pf6N2E2_3402	0.35	-0.7
3,946,786	-		Pf6N2E2_3402	0.35	+0.4
3,946,802	-		Pf6N2E2_3402	0.36	-0.6
3,947,036	+		Pf6N2E2_3402	0.55	-1.6
3,947,036	+		Pf6N2E2_3402	0.55	-0.6
3,947,037	-		Pf6N2E2_3402	0.55	-0.6
3,947,037	-		Pf6N2E2_3402	0.55	+0.4
3,947,037	-		Pf6N2E2_3402	0.55	+0.4
3,947,037	-		Pf6N2E2_3402	0.55	+0.4
3,947,037	-		Pf6N2E2_3402	0.55	-0.6
3,947,039	-		Pf6N2E2_3402	0.56	-2.9
3,947,294	+		Pf6N2E2_3402	0.76	+0.4
3,947,295	-		Pf6N2E2_3402	0.76	+0.4
3,947,295	-		Pf6N2E2_3402	0.76	+0.4
3,947,434	+		Pf6N2E2_3402	0.88	-0.1
3,947,434	+		Pf6N2E2_3402	0.88	-0.8
3,947,434	+		Pf6N2E2_3402	0.88	+0.4
3,947,434	+		Pf6N2E2_3402	0.88	+0.4
3,947,434	+		Pf6N2E2_3402	0.88	-0.6
3,947,435	-		Pf6N2E2_3402	0.88	-0.3
3,947,435	-		Pf6N2E2_3402	0.88	-0.6
3,947,435	-		Pf6N2E2_3402	0.88	+0.4
3,947,435	-		Pf6N2E2_3402	0.88	+0.4
3,947,435	-		Pf6N2E2_3402	0.88	-0.9
3,947,435	-		Pf6N2E2_3402	0.88	+0.4
3,947,441	-		Pf6N2E2_3402	0.88	-0.6
3,947,441	-		Pf6N2E2_3402	0.88	+0.4
3,947,441	-		Pf6N2E2_3402	0.88	+0.4
3,947,513	+				-0.9
3,947,514	-				+0.4
3,947,514	-				+0.4
3,947,530	-				+0.4
3,947,656	-				-1.2
3,947,656	-				-1.6
3,947,814	+		Pf6N2E2_3403	0.16	-0.7
3,947,814	+		Pf6N2E2_3403	0.16	-1.2
3,947,815	-		Pf6N2E2_3403	0.16	+0.4
3,947,815	-		Pf6N2E2_3403	0.16	+0.4
3,947,815	-		Pf6N2E2_3403	0.16	-0.6
3,947,940	+		Pf6N2E2_3403	0.25	-0.6
3,947,940	+		Pf6N2E2_3403	0.25	-1.2
3,947,940	+		Pf6N2E2_3403	0.25	+0.4
3,947,940	+		Pf6N2E2_3403	0.25	+0.7
3,947,940	+		Pf6N2E2_3403	0.25	+0.4
3,947,940	+		Pf6N2E2_3403	0.25	-1.2
3,947,941	-		Pf6N2E2_3403	0.25	-2.2
3,947,941	-		Pf6N2E2_3403	0.25	-0.6
3,947,941	-		Pf6N2E2_3403	0.25	-0.2
3,948,002	+		Pf6N2E2_3403	0.29	+0.4
3,948,002	+		Pf6N2E2_3403	0.29	-0.6
3,948,003	-		Pf6N2E2_3403	0.29	-1.2
3,948,003	-		Pf6N2E2_3403	0.29	+0.4
3,948,003	-		Pf6N2E2_3403	0.29	-0.6
3,948,039	+		Pf6N2E2_3403	0.32	+0.7
3,948,040	-		Pf6N2E2_3403	0.32	+0.4
3,948,056	-		Pf6N2E2_3403	0.33	-1.2
3,948,056	-		Pf6N2E2_3403	0.33	-0.5
3,948,156	+		Pf6N2E2_3403	0.40	+0.4
3,948,156	+		Pf6N2E2_3403	0.40	-1.2
3,948,157	-		Pf6N2E2_3403	0.40	-0.6
3,948,157	-		Pf6N2E2_3403	0.40	+0.4
3,948,157	-		Pf6N2E2_3403	0.40	-0.4
3,948,157	-		Pf6N2E2_3403	0.40	+0.4
3,948,157	-		Pf6N2E2_3403	0.40	-0.6
3,948,168	-		Pf6N2E2_3403	0.41	-0.6
3,948,168	-		Pf6N2E2_3403	0.41	-1.3
3,948,215	-		Pf6N2E2_3403	0.44	-0.6
3,948,215	-		Pf6N2E2_3403	0.44	-1.6
3,948,347	-		Pf6N2E2_3403	0.53	+0.4
3,948,554	+		Pf6N2E2_3403	0.68	-1.9
3,948,554	+		Pf6N2E2_3403	0.68	+0.4
3,948,554	+		Pf6N2E2_3403	0.68	+0.4
3,948,554	+		Pf6N2E2_3403	0.68	-0.9
3,948,554	+		Pf6N2E2_3403	0.68	-1.2
3,948,554	+		Pf6N2E2_3403	0.68	-0.6
3,948,554	+		Pf6N2E2_3403	0.68	-1.6
3,948,555	-		Pf6N2E2_3403	0.68	-0.8
3,948,555	-		Pf6N2E2_3403	0.68	+0.4
3,948,555	-		Pf6N2E2_3403	0.68	+0.4
3,948,555	-		Pf6N2E2_3403	0.68	+0.4