Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3163

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
3,655,407	-				-0.8
3,655,407	-				-0.8
3,655,545	-		Pf6N2E2_3161	0.24	-0.6
3,655,545	-		Pf6N2E2_3161	0.24	-0.8
3,655,545	-		Pf6N2E2_3161	0.24	-0.6
3,655,590	-		Pf6N2E2_3161	0.56	+0.4
3,655,612	-		Pf6N2E2_3161	0.71	+0.4
3,655,960	+		Pf6N2E2_3162	0.59	+0.4
3,655,962	+		Pf6N2E2_3162	0.60	+0.4
3,655,962	+		Pf6N2E2_3162	0.60	+0.4
3,655,963	-		Pf6N2E2_3162	0.60	+0.4
3,655,963	-		Pf6N2E2_3162	0.60	+0.4
3,655,986	+		Pf6N2E2_3162	0.66	-0.7
3,656,069	+		Pf6N2E2_3162	0.87	+0.4
3,656,069	+		Pf6N2E2_3162	0.87	-0.8
3,656,070	-		Pf6N2E2_3162	0.87	-0.9
3,656,169	+				+0.4
3,656,170	-				+0.4
3,656,171	+				+0.4
3,656,171	+				-1.2
3,656,172	-				+0.4
3,656,172	-				-0.6
3,656,192	-				-0.6
3,656,192	-				-1.2
3,656,192	-				-0.4
3,656,192	-				+0.4
3,656,199	+				-0.6
3,656,257	-				-0.7
3,656,411	+		Pf6N2E2_3163	0.21	-0.6
3,656,419	+		Pf6N2E2_3163	0.22	+0.4
3,656,419	+		Pf6N2E2_3163	0.22	-1.6
3,656,420	-		Pf6N2E2_3163	0.23	+0.8
3,656,469	-		Pf6N2E2_3163	0.32	-0.6
3,656,469	-		Pf6N2E2_3163	0.32	-1.2
3,656,469	-		Pf6N2E2_3163	0.32	+0.4
3,656,548	-		Pf6N2E2_3163	0.47	+0.4
3,656,548	-		Pf6N2E2_3163	0.47	+0.4
3,656,548	-		Pf6N2E2_3163	0.47	-0.6
3,656,565	+		Pf6N2E2_3163	0.50	-0.6
3,656,583	+		Pf6N2E2_3163	0.54	-0.6
3,656,584	-		Pf6N2E2_3163	0.54	+0.4
3,656,584	-		Pf6N2E2_3163	0.54	-0.7
3,656,596	-		Pf6N2E2_3163	0.56	-0.6
3,656,648	+		Pf6N2E2_3163	0.66	-1.2
3,656,648	+		Pf6N2E2_3163	0.66	+0.4
3,656,648	+		Pf6N2E2_3163	0.66	+0.4
3,656,649	-		Pf6N2E2_3163	0.66	-1.2
3,656,800	+				+0.4
3,656,810	+				-0.4
3,656,811	-				+0.4
3,656,811	-				-1.1
3,656,817	-				-0.7
3,656,831	+				-0.6
3,656,831	+				-2.0
3,656,831	+				-0.4
3,656,831	+				-0.4
3,656,831	+				+0.4
3,656,832	-				-0.6
3,656,832	-				+0.4
3,656,832	-				-0.7
3,656,847	-				-0.6
3,656,847	-				+0.4
3,656,847	-				-1.2
3,656,988	-				-0.6
3,656,996	+				+0.4
3,656,997	-				+0.4
3,657,031	+				+0.4
3,657,031	+				-0.7
3,657,031	+				+0.4
3,657,031	+				-0.6
3,657,032	-				-0.4
3,657,032	-				-1.2
3,657,032	-				-0.6
3,657,032	-				+0.4
3,657,119	+				-1.6
3,657,120	-				-1.6
3,657,269	+				+0.4
3,657,270	-				-0.6
3,657,270	-				-1.2
3,657,270	-				+0.4
3,657,299	+				+0.4
3,657,305	+				-0.8
3,657,346	+				+0.4
3,657,346	+				+0.4
3,657,346	+				-0.4
3,657,346	+				-0.7
3,657,347	-				-1.2
3,657,347	-				+0.4
3,657,347	-				+0.4
3,657,347	-				-1.6
3,657,347	-				+0.4
3,657,347	-				-0.6
3,657,347	-				+0.4
3,657,347	-				-0.6
3,657,347	-				-1.6
3,657,392	+				-0.6
3,657,393	-				-0.6
3,657,418	+				-1.8